CN184657

Overview
NameCN184657
Unique NameCN184657
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length403
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3633 contig Csv1_Contig3633:368..770. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN184657 vs. ExPASy Swiss-Prot
Match: ANXA1_PONAB (Annexin A1 OS=Pongo abelii GN=ANXA1 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 2.291e-12
Identity = 42/123 (34.15%), Postives = 61/123 (49.59%), Query Frame = 3
Query:   30 EVICSRTPSQIQLIRQHYHSKFGVHLEDDIKRHTSGDHEKLLLAYVSPPWNEGLEVDRQMVENDAKALYKAGEKRLGTDERTFIRIFCERSRAHLAYVAPVYHSMHGNSLKKVVKKETSGNFE 398
            E++ SRT  +I+ I + Y  +    L  DI   TSGD    LL+      +E   V+  + ++DA+ALY+AGE+R GTD   F  I   RS   L  V   Y     + + KV+  E  G+ E
Sbjct:  139 EILASRTNKEIRDINRVYREELKRDLAKDITSDTSGDFRNALLSLAKGDRSEDFGVNEDLADSDARALYEAGERRKGTDVNVFNTILTTRSYPQLRRVFQKYTKYSKHDMNKVLDLELKGDIE 261          
BLAST of CN184657 vs. ExPASy Swiss-Prot
Match: ANXA1_PANTR (Annexin A1 OS=Pan troglodytes GN=ANXA1 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 2.291e-12
Identity = 42/123 (34.15%), Postives = 61/123 (49.59%), Query Frame = 3
Query:   30 EVICSRTPSQIQLIRQHYHSKFGVHLEDDIKRHTSGDHEKLLLAYVSPPWNEGLEVDRQMVENDAKALYKAGEKRLGTDERTFIRIFCERSRAHLAYVAPVYHSMHGNSLKKVVKKETSGNFE 398
            E++ SRT  +I+ I + Y  +    L  DI   TSGD    LL+      +E   V+  + ++DA+ALY+AGE+R GTD   F  I   RS   L  V   Y     + + KV+  E  G+ E
Sbjct:  139 EILASRTNKEIRDINRVYREELKRDLAKDITSDTSGDFRNALLSLAKGDRSEDFGVNEDLADSDARALYEAGERRKGTDVNVFNTILTTRSYPQLRRVFQKYTKYSKHDMNKVLDLELKGDIE 261          
BLAST of CN184657 vs. ExPASy Swiss-Prot
Match: ANXA1_HUMAN (Annexin A1 OS=Homo sapiens GN=ANXA1 PE=1 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 2.291e-12
Identity = 42/123 (34.15%), Postives = 61/123 (49.59%), Query Frame = 3
Query:   30 EVICSRTPSQIQLIRQHYHSKFGVHLEDDIKRHTSGDHEKLLLAYVSPPWNEGLEVDRQMVENDAKALYKAGEKRLGTDERTFIRIFCERSRAHLAYVAPVYHSMHGNSLKKVVKKETSGNFE 398
            E++ SRT  +I+ I + Y  +    L  DI   TSGD    LL+      +E   V+  + ++DA+ALY+AGE+R GTD   F  I   RS   L  V   Y     + + KV+  E  G+ E
Sbjct:  139 EILASRTNKEIRDINRVYREELKRDLAKDITSDTSGDFRNALLSLAKGDRSEDFGVNEDLADSDARALYEAGERRKGTDVNVFNTILTTRSYPQLRRVFQKYTKYSKHDMNKVLDLELKGDIE 261          
BLAST of CN184657 vs. ExPASy Swiss-Prot
Match: ANX12_COLLI (Annexin A1 isoform p37 OS=Columba livia GN=CP37 PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 3.908e-12
Identity = 40/123 (32.52%), Postives = 61/123 (49.59%), Query Frame = 3
Query:   30 EVICSRTPSQIQLIRQHYHSKFGVHLEDDIKRHTSGDHEKLLLAYVSPPWNEGLEVDRQMVENDAKALYKAGEKRLGTDERTFIRIFCERSRAHLAYVAPVYHSMHGNSLKKVVKKETSGNFE 398
            E++ SR+  +I+   ++Y       L  DI   TSG  +K L+        E   V+  + +NDA+ALY+AGE++ GTD   F+ +   RS  HL  V   Y     + + KVV  E  G+ E
Sbjct:  135 EILASRSNKEIREASRYYKEVLKRDLTQDIISDTSGHFQKALVVLAKGDRCEDPHVNDDLADNDARALYEAGEQKKGTDVNVFVTVLTARSYPHLRRVFQKYTKYSKHDMNKVVDMELKGDIE 257          
BLAST of CN184657 vs. ExPASy Swiss-Prot
Match: ANXD7_ARATH (Annexin D7 OS=Arabidopsis thaliana GN=ANNAT7 PE=2 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 3.309e-11
Identity = 39/123 (31.71%), Postives = 68/123 (55.28%), Query Frame = 3
Query:   30 EVICSRTPSQIQLIRQHYHSKFGVHLEDDIKRHTSGDHEKLLLAYVSPPWNEGLEVDRQMVENDAKALY-KAGEKRLGTDERTFIRIFCERSRAHLAYVAPVYHSMHGNSLKKVVKKETSGNF 395
            E+ C+R+  ++   +Q Y +++   LE+D+  HTSGD  KLL+  VS    +G EV+  +  ++AK L+ K  EK    D+   IRI   RS+A ++     Y +  G S+ K +K+++   +
Sbjct:  108 EIACTRSALELFNAKQAYQARYKTSLEEDVAYHTSGDIRKLLVPLVSTFRYDGDEVNMTLARSEAKILHEKIKEKAYADDD--LIRILTTRSKAQISATLNHYKNNFGTSMSKYLKEDSENEY 228          
The following BLAST results are available for this feature:
BLAST of CN184657 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 75
Match NameE-valueIdentityDescription
ANXA1_PONAB2.291e-1234.15Annexin A1 OS=Pongo abelii GN=ANXA1 PE=2 SV=1[more]
ANXA1_PANTR2.291e-1234.15Annexin A1 OS=Pan troglodytes GN=ANXA1 PE=2 SV=1[more]
ANXA1_HUMAN2.291e-1234.15Annexin A1 OS=Homo sapiens GN=ANXA1 PE=1 SV=2[more]
ANX12_COLLI3.908e-1232.52Annexin A1 isoform p37 OS=Columba livia GN=CP37 PE... [more]
ANXD7_ARATH3.309e-1131.71Annexin D7 OS=Arabidopsis thaliana GN=ANNAT7 PE=2 ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0005N15_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0005N15, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184657 ID=CN184657; Name=CN184657; organism=Citrus sinensis; type=EST; length=403bp
GAGGCACAGGTAGTTTAAAAGCTGCCACTGAAGTAATTTGTTCTCGCACA
CCATCCCAGATTCAGTTGATTAGACAACATTACCATTCAAAGTTTGGCGT
CCACCTTGAAGATGATATTAAGAGACACACTTCTGGTGATCATGAAAAGC
TCTTGTTGGCATATGTGAGCCCCCCTTGGAATGAAGGTCTGGAAGTTGAC
AGACAAATGGTTGAGAATGATGCCAAGGCACTTTACAAAGCTGGGGAGAA
GAGATTAGGAACTGATGAGAGGACTTTCATTCGGATATTCTGTGAACGAA
GCAGGGCACATTTGGCTTATGTTGCTCCTGTTTATCACAGTATGCATGGA
AACTCACTTAAAAAGGTGGTGAAGAAGGAAACATCGGGCAATTTTGAGTA
TGG
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