CN184610
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN184610 vs. ExPASy Swiss-Prot
Match: IF5A_STAMF (Translation initiation factor 5A OS=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) GN=eIF5A PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.709e-11 Identity = 40/114 (35.09%), Postives = 60/114 (52.63%), Query Frame = 2 Query: 134 SKTYPQQAGTIRKNGYIVIKSRPCKVVEVSTSKTGNHGHAKCHFVGIDIFSGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDETLLTQLKDG 475 SKTY G ++ +I+I PC++VE+S +KTG HG AK H V I +F+G K + P +VP + + Q+I D + E T ++ P+DE L +LK G Sbjct: 2 SKTYAT-LGELKPGNFIIIDGEPCRIVEMSKAKTGKHGSAKAHVVAIGLFTGNKKTLVAPVDQRVEVPVIEKRVGQIIADMGDLLQVMDMETFET-FEVEKPSDEKLREKLKPG 113
BLAST of CN184610 vs. ExPASy Swiss-Prot
Match: IF5A_METS5 (Translation initiation factor 5A OS=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) GN=eIF5A PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.036e-11 Identity = 40/130 (30.77%), Postives = 68/130 (52.31%), Query Frame = 2 Query: 158 GTIRKNGYIVIKSRPCKVVEVSTSKTGNHGHAKCHFVGIDIFSGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDETLLTQLKDGFAEGKDLVLTVMSSMGEEQICALK 547 G +++ YIVI PC+VVEV+ +KTG HG AK + + + IF+G K + P +VP + + Q+I D + E T ++ +PT+E + +++K KD + MG ++I +K Sbjct: 9 GEMKEGSYIVIDGEPCRVVEVTKAKTGKHGSAKANIIAVSIFTGAKKTLMAPVDSTVEVPIIEKRMGQVISNVGDKVQIMDLETYET-FEIDMPTEEDVASKIK------KDAEVEYWEVMGRKKIVRVK 131
BLAST of CN184610 vs. ExPASy Swiss-Prot
Match: IF5A_KORCO (Translation initiation factor 5A OS=Korarchaeum cryptofilum (strain OPF8) GN=eIF5A PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 7.883e-11 Identity = 41/127 (32.28%), Postives = 64/127 (50.39%), Query Frame = 2 Query: 155 AGTIRKNGYIVIKSRPCKVVEVSTSKTGNHGHAKCHFVGIDIFSGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDETLLTQLKDGFAEGKDLVLTVMSSMGEEQI 535 AG +RK Y+++ PC+V+EVS SK G HG AK IF G + I P+ ++P V++ Q+I++ V L+ +L LP D L ++LK G + + SMG+ +I Sbjct: 8 AGDLRKGSYVILDDEPCEVLEVSKSKPGKHGSAKVRVEARGIFDGARRSKIFPADALVEIPIVDKKTAQVINV-YGNVVQLMDLETYETFELPLPEDPELASRLKSG------IEVEYWESMGKRKI 127 The following BLAST results are available for this feature:
BLAST of CN184610 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 53
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Sequences
The
following sequences are available for this feature:
EST sequence >CN184610 ID=CN184610; Name=CN184610; organism=Citrus sinensis; type=EST; length=676bpback to top |