CN184605
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN184605 vs. ExPASy Swiss-Prot
Match: HOX19_ORYSI (Homeobox-leucine zipper protein HOX19 OS=Oryza sativa subsp. indica GN=HOX19 PE=2 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 7.409e-32 Identity = 76/135 (56.30%), Postives = 91/135 (67.41%), Query Frame = -2 Query: 268 ESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSKLKQTEMECEYLKRWFGSLTEQNRRLQREVEELRAMKVGPPTVIS-PHSCEP---------LPASTLSMCPRCERVTTTAVDKGPTKVTTASSTPA 642 + FR + TLNPKQK LA QL L+PRQVEVWFQNRRAR+KLKQTE++CE+LKR +LTE+NRRLQRE++ELRA+K PP S H P LPA+TL++CP CERV A KV A T A Sbjct: 141 DRFREHSTLNPKQKVALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCETLTEENRRLQRELQELRALKFAPPPPSSAAHQPSPAPPAPFYMQLPAATLTICPSCERVGGPA---SAAKVVAADGTKA 272
BLAST of CN184605 vs. ExPASy Swiss-Prot
Match: HOX17_ORYSI (Homeobox-leucine zipper protein HOX17 OS=Oryza sativa subsp. indica GN=HOX17 PE=2 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 7.409e-32 Identity = 73/131 (55.73%), Postives = 96/131 (73.28%), Query Frame = -2 Query: 277 ESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSKLKQTEMECEYLKRWFGSLTEQNRRLQREVEELRAMKVGPPTVISPHSCEPL-PASTLSMCPRCERVTTT--------AVDKGPTKVTTASS 642 +SFR + TLNP+QK LA QL L+PRQVEVWFQNRRAR+KLKQTE++CE+LKR +LTE+NRRLQ+EV+ELRA+K ++SPH + P +TL+MCP CERV+ T A D+ + TTA++ Sbjct: 96 DSFREHPTLNPRQKATLAQQLGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCETLTEENRRLQKEVQELRALK-----LVSPHLYMNMSPPTTLTMCPSCERVSNTNNNSSAAAAADRRGIRTTTAAA 221
BLAST of CN184605 vs. ExPASy Swiss-Prot
Match: HOX17_ORYSJ (Homeobox-leucine zipper protein HOX17 OS=Oryza sativa subsp. japonica GN=HOX17 PE=2 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 9.676e-32 Identity = 73/130 (56.15%), Postives = 95/130 (73.08%), Query Frame = -2 Query: 280 ESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSKLKQTEMECEYLKRWFGSLTEQNRRLQREVEELRAMKVGPPTVISPHSCEPL-PASTLSMCPRCERVTTT--------AVDKGPTKVTTAS 642 +SFR + TLNP+QK LA QL L+PRQVEVWFQNRRAR+KLKQTE++CE+LKR +LTE+NRRLQ+EV+ELRA+K ++SPH + P +TL+MCP CERV+ T A D+ + TTA+ Sbjct: 96 DSFREHPTLNPRQKATLAQQLGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCETLTEENRRLQKEVQELRALK-----LVSPHLYMNMSPPTTLTMCPSCERVSNTNNNSSAAAAADRRGIRTTTAA 220
BLAST of CN184605 vs. ExPASy Swiss-Prot
Match: HOX15_ORYSI (Homeobox-leucine zipper protein HOX15 OS=Oryza sativa subsp. indica GN=HOX15 PE=2 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 9.676e-32 Identity = 69/138 (50.00%), Postives = 92/138 (66.67%), Query Frame = -2 Query: 229 ESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSKLKQTEMECEYLKRWFGSLTEQNRRLQREVEELRAMKVGPPTVISPHSCEPLPASTLSMCPRCERVTTTAVDKGPTKVTTASSTPAALSPKVGTPALQS 642 + F+ + TLNPKQK LA QL L+PRQVEVWFQNRRAR+KLKQTE++CE LKR +LTE+NRRL RE+++LRA+ + P+PA+TLS+CP CER+ T A G + A T +P + +P +S Sbjct: 108 DRFKEHSTLNPKQKVALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCELLKRCCETLTEENRRLHRELQQLRALTHSTAAGFFMATTLPVPAATLSICPSCERLATAAAAAGASPTAAADRTNKPTAPHLFSPFAKS 245
BLAST of CN184605 vs. ExPASy Swiss-Prot
Match: ATHB4_ARATH (Homeobox-leucine zipper protein ATHB-4 OS=Arabidopsis thaliana GN=ATHB-4 PE=2 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 2.156e-31 Identity = 75/136 (55.15%), Postives = 96/136 (70.59%), Query Frame = -2 Query: 256 ESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSKLKQTEMECEYLKRWFGSLTEQNRRLQREVEELRAMKVGPPTVISPH-SCEPLPASTLSMCPRCERVTTTA--VDKGPTKVTTAS----STPAALSP 642 E+F+ + TLNPKQK LA QL L+ RQVEVWFQNRRAR+KLKQTE++CEYLKR +LTE+NRRLQ+EV ELRA+K +SPH P +TL+MCP CERV+++A V P+ TT + +P L+P Sbjct: 177 ETFKEHSTLNPKQKLALAKQLNLRARQVEVWFQNRRARTKLKQTEVDCEYLKRCCDNLTEENRRLQKEVSELRALK------LSPHLYMHMTPPTTLTMCPSCERVSSSAATVTAAPSTTTTPTVVGRPSPQRLTP 306
BLAST of CN184605 vs. ExPASy Swiss-Prot
Match: HAT3_ARATH (Homeobox-leucine zipper protein HAT3 OS=Arabidopsis thaliana GN=HAT3 PE=2 SV=2) HSP 1 Score: 135.191 bits (339), Expect = 2.815e-31 Identity = 74/139 (53.24%), Postives = 93/139 (66.91%), Query Frame = -2 Query: 232 ESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSKLKQTEMECEYLKRWFGSLTEQNRRLQREVEELRAMKVGPPTVISPHSCEPL-PASTLSMCPRCERVTTTAVDKGPTKVTTASSTP-AALSPKVGTPALQ 642 E+F+ + TLNPKQK LA QL L+ RQVEVWFQNRRAR+KLKQTE++CEYLKR +LT++NRRLQ+EV ELRA+K +SPH + P +TL+MCP CERV T+ SS+P +SP P Q Sbjct: 176 ETFKEHSTLNPKQKMALAKQLNLRTRQVEVWFQNRRARTKLKQTEVDCEYLKRCCENLTDENRRLQKEVSELRALK------LSPHLYMHMKPPTTLTMCPSCERVAVTSSSSSVAPPVMNSSSPMGPMSPWAAMPLRQ 308
BLAST of CN184605 vs. ExPASy Swiss-Prot
Match: HOX15_ORYSJ (Homeobox-leucine zipper protein HOX15 OS=Oryza sativa subsp. japonica GN=HOX15 PE=2 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.397e-30 Identity = 69/138 (50.00%), Postives = 92/138 (66.67%), Query Frame = -2 Query: 229 ESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSKLKQTEMECEYLKRWFGSLTEQNRRLQREVEELRAMKVGPPTVISPHSCEPLPASTLSMCPRCERVTTTAVDKGPTKVTTASSTPAALSPKVGTPALQS 642 + F+ + TLNPKQK LA QL L+PRQVEVWFQNRRAR+KLKQTE++CE LKR +LTE+NRRL RE+++LRA+ + P+PA+TLS+CP CER+ T A G + A T +P + +P +S Sbjct: 108 DRFKEHSTLNPKQKVALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCELLKRCCETLTEENRRLHRELQQLRALTHSTAAGFFMATTLPVPAATLSICPSCERLATAAA-AGASPTAAADRTNKPTAPHLFSPFAKS 244
BLAST of CN184605 vs. ExPASy Swiss-Prot
Match: HOX1_ORYSJ (Homeobox-leucine zipper protein HOX1 OS=Oryza sativa subsp. japonica GN=HOX1 PE=1 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 5.310e-30 Identity = 70/135 (51.85%), Postives = 92/135 (68.15%), Query Frame = -2 Query: 244 ESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSKLKQTEMECEYLKRWFGSLTEQNRRLQREVEELRAMKVGPPTVISPH--SCEPLPASTLSMCPRCERVTTTAVDKGPTKVTTASSTPAALSPKVGT 642 ++F+ ++TLNPKQK LA QL LKPRQVEVWFQNRRAR+KLKQTE++CE LKR +LT++NRRL RE++ELRA+K+ H P +TL+MCP CERV + A TT +++ AA + V T Sbjct: 171 DTFKEHNTLNPKQKAALARQLNLKPRQVEVWFQNRRARTKLKQTEVDCELLKRCCETLTDENRRLHRELQELRALKLATAAAAPHHLYGARVPPPTTLTMCPSCERVASAA-------TTTRNNSGAAPARPVPT 298
BLAST of CN184605 vs. ExPASy Swiss-Prot
Match: HOX1_ORYSI (Homeobox-leucine zipper protein HOX1 OS=Oryza sativa subsp. indica GN=HOX1 PE=1 SV=2) HSP 1 Score: 130.954 bits (328), Expect = 5.310e-30 Identity = 70/135 (51.85%), Postives = 92/135 (68.15%), Query Frame = -2 Query: 244 ESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSKLKQTEMECEYLKRWFGSLTEQNRRLQREVEELRAMKVGPPTVISPH--SCEPLPASTLSMCPRCERVTTTAVDKGPTKVTTASSTPAALSPKVGT 642 ++F+ ++TLNPKQK LA QL LKPRQVEVWFQNRRAR+KLKQTE++CE LKR +LT++NRRL RE++ELRA+K+ H P +TL+MCP CERV + A TT +++ AA + V T Sbjct: 171 DTFKEHNTLNPKQKAALARQLNLKPRQVEVWFQNRRARTKLKQTEVDCELLKRCCETLTDENRRLHRELQELRALKLATAAAAPHHLYGARVPPPTTLTMCPSCERVASAA-------TTTRNNSGAAPARPVPT 298
BLAST of CN184605 vs. ExPASy Swiss-Prot
Match: HAT22_ARATH (Homeobox-leucine zipper protein HAT22 OS=Arabidopsis thaliana GN=HAT22 PE=1 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 6.935e-30 Identity = 65/123 (52.85%), Postives = 92/123 (74.80%), Query Frame = -2 Query: 295 ESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSKLKQTEMECEYLKRWFGSLTEQNRRLQREVEELRAMKVGPPTVISPHSCEPLPASTLSMCPRCERV-------TTTAVDKGPTK 642 ++F+ + TLNPKQK+ LA QL L+PRQVEVWFQNRRAR+KLKQTE++CE+LK+ +LT++NRRLQ+E+++L+A+K+ P + +PA+TL+MCP CER+ TTAVD+ K Sbjct: 140 DNFKLHSTLNPKQKQALARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLTDENRRLQKELQDLKALKLSQPFYMH------MPAATLTMCPSCERLGGGGVGGDTTAVDEETAK 256 The following BLAST results are available for this feature:
BLAST of CN184605 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 35
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Sequences
The
following sequences are available for this feature:
EST sequence >CN184605 ID=CN184605; Name=CN184605; organism=Citrus sinensis; type=EST; length=643bpback to top |