CN184605

Overview
NameCN184605
Unique NameCN184605
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length643
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN184605 vs. ExPASy Swiss-Prot
Match: HOX19_ORYSI (Homeobox-leucine zipper protein HOX19 OS=Oryza sativa subsp. indica GN=HOX19 PE=2 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 7.409e-32
Identity = 76/135 (56.30%), Postives = 91/135 (67.41%), Query Frame = -2
Query:  268 ESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSKLKQTEMECEYLKRWFGSLTEQNRRLQREVEELRAMKVGPPTVIS-PHSCEP---------LPASTLSMCPRCERVTTTAVDKGPTKVTTASSTPA 642
            + FR + TLNPKQK  LA QL L+PRQVEVWFQNRRAR+KLKQTE++CE+LKR   +LTE+NRRLQRE++ELRA+K  PP   S  H   P         LPA+TL++CP CERV   A      KV  A  T A
Sbjct:  141 DRFREHSTLNPKQKVALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCETLTEENRRLQRELQELRALKFAPPPPSSAAHQPSPAPPAPFYMQLPAATLTICPSCERVGGPA---SAAKVVAADGTKA 272          
BLAST of CN184605 vs. ExPASy Swiss-Prot
Match: HOX17_ORYSI (Homeobox-leucine zipper protein HOX17 OS=Oryza sativa subsp. indica GN=HOX17 PE=2 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 7.409e-32
Identity = 73/131 (55.73%), Postives = 96/131 (73.28%), Query Frame = -2
Query:  277 ESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSKLKQTEMECEYLKRWFGSLTEQNRRLQREVEELRAMKVGPPTVISPHSCEPL-PASTLSMCPRCERVTTT--------AVDKGPTKVTTASS 642
            +SFR + TLNP+QK  LA QL L+PRQVEVWFQNRRAR+KLKQTE++CE+LKR   +LTE+NRRLQ+EV+ELRA+K     ++SPH    + P +TL+MCP CERV+ T        A D+   + TTA++
Sbjct:   96 DSFREHPTLNPRQKATLAQQLGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCETLTEENRRLQKEVQELRALK-----LVSPHLYMNMSPPTTLTMCPSCERVSNTNNNSSAAAAADRRGIRTTTAAA 221          
BLAST of CN184605 vs. ExPASy Swiss-Prot
Match: HOX17_ORYSJ (Homeobox-leucine zipper protein HOX17 OS=Oryza sativa subsp. japonica GN=HOX17 PE=2 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 9.676e-32
Identity = 73/130 (56.15%), Postives = 95/130 (73.08%), Query Frame = -2
Query:  280 ESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSKLKQTEMECEYLKRWFGSLTEQNRRLQREVEELRAMKVGPPTVISPHSCEPL-PASTLSMCPRCERVTTT--------AVDKGPTKVTTAS 642
            +SFR + TLNP+QK  LA QL L+PRQVEVWFQNRRAR+KLKQTE++CE+LKR   +LTE+NRRLQ+EV+ELRA+K     ++SPH    + P +TL+MCP CERV+ T        A D+   + TTA+
Sbjct:   96 DSFREHPTLNPRQKATLAQQLGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCETLTEENRRLQKEVQELRALK-----LVSPHLYMNMSPPTTLTMCPSCERVSNTNNNSSAAAAADRRGIRTTTAA 220          
BLAST of CN184605 vs. ExPASy Swiss-Prot
Match: HOX15_ORYSI (Homeobox-leucine zipper protein HOX15 OS=Oryza sativa subsp. indica GN=HOX15 PE=2 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 9.676e-32
Identity = 69/138 (50.00%), Postives = 92/138 (66.67%), Query Frame = -2
Query:  229 ESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSKLKQTEMECEYLKRWFGSLTEQNRRLQREVEELRAMKVGPPTVISPHSCEPLPASTLSMCPRCERVTTTAVDKGPTKVTTASSTPAALSPKVGTPALQS 642
            + F+ + TLNPKQK  LA QL L+PRQVEVWFQNRRAR+KLKQTE++CE LKR   +LTE+NRRL RE+++LRA+           +  P+PA+TLS+CP CER+ T A   G +    A  T    +P + +P  +S
Sbjct:  108 DRFKEHSTLNPKQKVALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCELLKRCCETLTEENRRLHRELQQLRALTHSTAAGFFMATTLPVPAATLSICPSCERLATAAAAAGASPTAAADRTNKPTAPHLFSPFAKS 245          
BLAST of CN184605 vs. ExPASy Swiss-Prot
Match: ATHB4_ARATH (Homeobox-leucine zipper protein ATHB-4 OS=Arabidopsis thaliana GN=ATHB-4 PE=2 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 2.156e-31
Identity = 75/136 (55.15%), Postives = 96/136 (70.59%), Query Frame = -2
Query:  256 ESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSKLKQTEMECEYLKRWFGSLTEQNRRLQREVEELRAMKVGPPTVISPH-SCEPLPASTLSMCPRCERVTTTA--VDKGPTKVTTAS----STPAALSP 642
            E+F+ + TLNPKQK  LA QL L+ RQVEVWFQNRRAR+KLKQTE++CEYLKR   +LTE+NRRLQ+EV ELRA+K      +SPH      P +TL+MCP CERV+++A  V   P+  TT +     +P  L+P
Sbjct:  177 ETFKEHSTLNPKQKLALAKQLNLRARQVEVWFQNRRARTKLKQTEVDCEYLKRCCDNLTEENRRLQKEVSELRALK------LSPHLYMHMTPPTTLTMCPSCERVSSSAATVTAAPSTTTTPTVVGRPSPQRLTP 306          
BLAST of CN184605 vs. ExPASy Swiss-Prot
Match: HAT3_ARATH (Homeobox-leucine zipper protein HAT3 OS=Arabidopsis thaliana GN=HAT3 PE=2 SV=2)

HSP 1 Score: 135.191 bits (339), Expect = 2.815e-31
Identity = 74/139 (53.24%), Postives = 93/139 (66.91%), Query Frame = -2
Query:  232 ESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSKLKQTEMECEYLKRWFGSLTEQNRRLQREVEELRAMKVGPPTVISPHSCEPL-PASTLSMCPRCERVTTTAVDKGPTKVTTASSTP-AALSPKVGTPALQ 642
            E+F+ + TLNPKQK  LA QL L+ RQVEVWFQNRRAR+KLKQTE++CEYLKR   +LT++NRRLQ+EV ELRA+K      +SPH    + P +TL+MCP CERV  T+           SS+P   +SP    P  Q
Sbjct:  176 ETFKEHSTLNPKQKMALAKQLNLRTRQVEVWFQNRRARTKLKQTEVDCEYLKRCCENLTDENRRLQKEVSELRALK------LSPHLYMHMKPPTTLTMCPSCERVAVTSSSSSVAPPVMNSSSPMGPMSPWAAMPLRQ 308          
BLAST of CN184605 vs. ExPASy Swiss-Prot
Match: HOX15_ORYSJ (Homeobox-leucine zipper protein HOX15 OS=Oryza sativa subsp. japonica GN=HOX15 PE=2 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 1.397e-30
Identity = 69/138 (50.00%), Postives = 92/138 (66.67%), Query Frame = -2
Query:  229 ESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSKLKQTEMECEYLKRWFGSLTEQNRRLQREVEELRAMKVGPPTVISPHSCEPLPASTLSMCPRCERVTTTAVDKGPTKVTTASSTPAALSPKVGTPALQS 642
            + F+ + TLNPKQK  LA QL L+PRQVEVWFQNRRAR+KLKQTE++CE LKR   +LTE+NRRL RE+++LRA+           +  P+PA+TLS+CP CER+ T A   G +    A  T    +P + +P  +S
Sbjct:  108 DRFKEHSTLNPKQKVALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCELLKRCCETLTEENRRLHRELQQLRALTHSTAAGFFMATTLPVPAATLSICPSCERLATAAA-AGASPTAAADRTNKPTAPHLFSPFAKS 244          
BLAST of CN184605 vs. ExPASy Swiss-Prot
Match: HOX1_ORYSJ (Homeobox-leucine zipper protein HOX1 OS=Oryza sativa subsp. japonica GN=HOX1 PE=1 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 5.310e-30
Identity = 70/135 (51.85%), Postives = 92/135 (68.15%), Query Frame = -2
Query:  244 ESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSKLKQTEMECEYLKRWFGSLTEQNRRLQREVEELRAMKVGPPTVISPH--SCEPLPASTLSMCPRCERVTTTAVDKGPTKVTTASSTPAALSPKVGT 642
            ++F+ ++TLNPKQK  LA QL LKPRQVEVWFQNRRAR+KLKQTE++CE LKR   +LT++NRRL RE++ELRA+K+        H       P +TL+MCP CERV + A        TT +++ AA +  V T
Sbjct:  171 DTFKEHNTLNPKQKAALARQLNLKPRQVEVWFQNRRARTKLKQTEVDCELLKRCCETLTDENRRLHRELQELRALKLATAAAAPHHLYGARVPPPTTLTMCPSCERVASAA-------TTTRNNSGAAPARPVPT 298          
BLAST of CN184605 vs. ExPASy Swiss-Prot
Match: HOX1_ORYSI (Homeobox-leucine zipper protein HOX1 OS=Oryza sativa subsp. indica GN=HOX1 PE=1 SV=2)

HSP 1 Score: 130.954 bits (328), Expect = 5.310e-30
Identity = 70/135 (51.85%), Postives = 92/135 (68.15%), Query Frame = -2
Query:  244 ESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSKLKQTEMECEYLKRWFGSLTEQNRRLQREVEELRAMKVGPPTVISPH--SCEPLPASTLSMCPRCERVTTTAVDKGPTKVTTASSTPAALSPKVGT 642
            ++F+ ++TLNPKQK  LA QL LKPRQVEVWFQNRRAR+KLKQTE++CE LKR   +LT++NRRL RE++ELRA+K+        H       P +TL+MCP CERV + A        TT +++ AA +  V T
Sbjct:  171 DTFKEHNTLNPKQKAALARQLNLKPRQVEVWFQNRRARTKLKQTEVDCELLKRCCETLTDENRRLHRELQELRALKLATAAAAPHHLYGARVPPPTTLTMCPSCERVASAA-------TTTRNNSGAAPARPVPT 298          
BLAST of CN184605 vs. ExPASy Swiss-Prot
Match: HAT22_ARATH (Homeobox-leucine zipper protein HAT22 OS=Arabidopsis thaliana GN=HAT22 PE=1 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 6.935e-30
Identity = 65/123 (52.85%), Postives = 92/123 (74.80%), Query Frame = -2
Query:  295 ESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSKLKQTEMECEYLKRWFGSLTEQNRRLQREVEELRAMKVGPPTVISPHSCEPLPASTLSMCPRCERV-------TTTAVDKGPTK 642
            ++F+ + TLNPKQK+ LA QL L+PRQVEVWFQNRRAR+KLKQTE++CE+LK+   +LT++NRRLQ+E+++L+A+K+  P  +       +PA+TL+MCP CER+        TTAVD+   K
Sbjct:  140 DNFKLHSTLNPKQKQALARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLTDENRRLQKELQDLKALKLSQPFYMH------MPAATLTMCPSCERLGGGGVGGDTTAVDEETAK 256          
The following BLAST results are available for this feature:
BLAST of CN184605 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 35
Match NameE-valueIdentityDescription
HOX19_ORYSI7.409e-3256.30Homeobox-leucine zipper protein HOX19 OS=Oryza sat... [more]
HOX17_ORYSI7.409e-3255.73Homeobox-leucine zipper protein HOX17 OS=Oryza sat... [more]
HOX17_ORYSJ9.676e-3256.15Homeobox-leucine zipper protein HOX17 OS=Oryza sat... [more]
HOX15_ORYSI9.676e-3250.00Homeobox-leucine zipper protein HOX15 OS=Oryza sat... [more]
ATHB4_ARATH2.156e-3155.15Homeobox-leucine zipper protein ATHB-4 OS=Arabidop... [more]
HAT3_ARATH2.815e-3153.24Homeobox-leucine zipper protein HAT3 OS=Arabidopsi... [more]
HOX15_ORYSJ1.397e-3050.00Homeobox-leucine zipper protein HOX15 OS=Oryza sat... [more]
HOX1_ORYSJ5.310e-3051.85Homeobox-leucine zipper protein HOX1 OS=Oryza sati... [more]
HOX1_ORYSI5.310e-3051.85Homeobox-leucine zipper protein HOX1 OS=Oryza sati... [more]
HAT22_ARATH6.935e-3052.85Homeobox-leucine zipper protein HAT22 OS=Arabidops... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0005M09_f Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0005M09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184605 ID=CN184605; Name=CN184605; organism=Citrus sinensis; type=EST; length=643bp
ACAATTAATTAAGATCGAGAAACAATCCCCAAGAAATTAACTAAGATATC
TAAGCAGATCAGATACCACACATATATATCAATGATAGTATCTTATCTTC
ATTGGTATCTTGCATGCACACTTGCATATTTCTTTTCCTATGAACATCCT
CTAAAACTAATTTCTCCTTTTGCTTTTGATTAATGTTTTGCCACGTTTAA
CTTTCCATCAGGCCGCCGAAGGCTACCGTGACTGGAGGGCCGGCGTCCCG
ACTTTAGGAGACAATGCCGCGGGAGTGGAGGAGGCGGTGGTGACCTTGGT
GGGGCCCTTGTCAACGGCGGTGGTGGTCACGCGCTCACACCGTGGACACA
TTGATAGGGTTGATGCCGGGAGTGGCTCACAACTGTGGGGAGAGATCACG
GTGGGTGGGCCCACCTTCATAGCCCTGAGCTCCTCCACTTCCCTTTGCAG
CCTCCTGTTTTGTTCAGTCAATGAACCAAACCATCTCTTCAAGTACTCGC
ATTCCATCTCCGTTTGCTTCAGCTTGCTCCTGGCCCTACGATTCTGAAAC
CAGACTTCAACTTGACGTGGCTTCAGCTTCAACTGCGTAGCCAGTTCTTC
TTTCTGCTTAGGGTTAAGGGTGTGGTTATGTCTGAAACTTTCT
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