CN184605
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN184605 vs. ExPASy Swiss-Prot
Match: HOX2_ORYSJ (Homeobox-leucine zipper protein HOX2 OS=Oryza sativa subsp. japonica GN=HOX2 PE=1 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 9.057e-30 Identity = 69/140 (49.29%), Postives = 90/140 (64.29%), Query Frame = -2 Query: 250 ESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSKLKQTEMECEYLKRWFGSLTEQNRRLQREVEELRAMKVGP-PTVISPHSCEPLPASTLSMCPRCERVTTTAVDKGP--------TKVTTASSTPAALSPKV 642 E F+ + TLNPKQK LA +L L+PRQVEVWFQNRRAR+KLKQTE++CEYLKRW L ++N+RL++E+ +LRA+K P P S A+TL+MCP C RV T P + T +SS+ AA + V Sbjct: 129 ECFKTHSTLNPKQKVALANRLGLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRWCERLADENKRLEKELADLRALKAAPSPASASAMQPSSSAAATLTMCPSCRRVATAGAPHQPNHQQCHPKSNTTISSSSTAAAAVAV 268
BLAST of CN184605 vs. ExPASy Swiss-Prot
Match: HOX2_ORYSI (Homeobox-leucine zipper protein HOX2 OS=Oryza sativa subsp. indica GN=HOX2 PE=1 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 9.057e-30 Identity = 69/140 (49.29%), Postives = 90/140 (64.29%), Query Frame = -2 Query: 250 ESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSKLKQTEMECEYLKRWFGSLTEQNRRLQREVEELRAMKVGP-PTVISPHSCEPLPASTLSMCPRCERVTTTAVDKGP--------TKVTTASSTPAALSPKV 642 E F+ + TLNPKQK LA +L L+PRQVEVWFQNRRAR+KLKQTE++CEYLKRW L ++N+RL++E+ +LRA+K P P S A+TL+MCP C RV T P + T +SS+ AA + V Sbjct: 129 ECFKTHSTLNPKQKVALANRLGLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRWCERLADENKRLEKELADLRALKAAPSPASASAMQPSSSAAATLTMCPSCRRVATAGAPHQPNHQQCHPKSNTTISSSSTAAAAVAV 268
BLAST of CN184605 vs. ExPASy Swiss-Prot
Match: HAT4_ARATH (Homeobox-leucine zipper protein HAT4 OS=Arabidopsis thaliana GN=HAT4 PE=1 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 2.913e-28 Identity = 62/106 (58.49%), Postives = 81/106 (76.42%), Query Frame = -2 Query: 325 ESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSKLKQTEMECEYLKRWFGSLTEQNRRLQREVEELRAMKVGPPTVISPHSCEPLPASTLSMCPRCERVT 642 E+F+ + TLNPKQK+ LA QL L+ RQVEVWFQNRRAR+KLKQTE++CE+L+R +LTE+NRRLQ+EV ELRA+K+ P + P +TL+MCP CE V+ Sbjct: 143 ETFKDHSTLNPKQKQALAKQLGLRARQVEVWFQNRRARTKLKQTEVDCEFLRRCCENLTEENRRLQKEVTELRALKLSPQFYM-----HMSPPTTLTMCPSCEHVS 243
BLAST of CN184605 vs. ExPASy Swiss-Prot
Match: HOX28_ORYSJ (Homeobox-leucine zipper protein HOX28 OS=Oryza sativa subsp. japonica GN=HOX28 PE=2 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 4.970e-28 Identity = 62/110 (56.36%), Postives = 78/110 (70.91%), Query Frame = -2 Query: 313 ESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSKLKQTEMECEYLKRWFGSLTEQNRRLQREVEELRAMKVGPPTVISPHSCEPLPASTLSMCPRCERVTTTAV 642 E F+ +HTL PKQK LA L L+PRQVEVWFQNRRAR+KLKQTE++CE+LKRW L + NRRL +E+ ELRA+K P +P + P P +TL+MC C+RV V Sbjct: 108 ECFKTHHTLTPKQKVALAKSLNLRPRQVEVWFQNRRARTKLKQTEVDCEHLKRWCDQLADDNRRLHKELAELRALKATP----TPPAAAP-PLTTLTMCLSCKRVANAGV 212
BLAST of CN184605 vs. ExPASy Swiss-Prot
Match: HOX28_ORYSI (Homeobox-leucine zipper protein HOX28 OS=Oryza sativa subsp. indica GN=HOX28 PE=2 SV=2) HSP 1 Score: 124.405 bits (311), Expect = 4.970e-28 Identity = 62/110 (56.36%), Postives = 78/110 (70.91%), Query Frame = -2 Query: 313 ESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSKLKQTEMECEYLKRWFGSLTEQNRRLQREVEELRAMKVGPPTVISPHSCEPLPASTLSMCPRCERVTTTAV 642 E F+ +HTL PKQK LA L L+PRQVEVWFQNRRAR+KLKQTE++CE+LKRW L + NRRL +E+ ELRA+K P +P + P P +TL+MC C+RV V Sbjct: 108 ECFKTHHTLTPKQKVALAKSLNLRPRQVEVWFQNRRARTKLKQTEVDCEHLKRWCDQLADDNRRLHKELAELRALKATP----TPPAAAP-PLTTLTMCLSCKRVANAGV 212
BLAST of CN184605 vs. ExPASy Swiss-Prot
Match: HAT9_ARATH (Homeobox-leucine zipper protein HAT9 OS=Arabidopsis thaliana GN=HAT9 PE=2 SV=2) HSP 1 Score: 124.405 bits (311), Expect = 4.970e-28 Identity = 59/105 (56.19%), Postives = 81/105 (77.14%), Query Frame = -2 Query: 328 ESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSKLKQTEMECEYLKRWFGSLTEQNRRLQREVEELRAMKVGPPTVISPHSCEPLPASTLSMCPRCERV 642 ESF+ + TLNPKQK+ LA QL L+PRQVEVWFQNRRAR+KLKQTE++CE+LK+ +L ++N RLQ+E++EL+ +K+ P + +PASTL+ CP CER+ Sbjct: 127 ESFKDHSTLNPKQKQVLARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLADENIRLQKEIQELKTLKLTQPFYMH------MPASTLTKCPSCERI 225
BLAST of CN184605 vs. ExPASy Swiss-Prot
Match: HAT2_ARATH (Homeobox-leucine zipper protein HAT2 OS=Arabidopsis thaliana GN=HAT2 PE=2 SV=2) HSP 1 Score: 121.709 bits (304), Expect = 3.221e-27 Identity = 62/105 (59.05%), Postives = 76/105 (72.38%), Query Frame = -2 Query: 328 ESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSKLKQTEMECEYLKRWFGSLTEQNRRLQREVEELRAMKVGPPTVISPHSCEPLPASTLSMCPRCERV 642 E+F+ ++TLNPKQK LA +L L RQVEVWFQNRRAR+KLKQTE++CEYLKR LTE+NRRLQ+E ELR +K+ P + P +TL MCP CERV Sbjct: 144 ETFKEHNTLNPKQKLALAKKLNLTARQVEVWFQNRRARTKLKQTEVDCEYLKRCVEKLTEENRRLQKEAMELRTLKLSP-----QFYGQMTPPTTLIMCPSCERV 243
BLAST of CN184605 vs. ExPASy Swiss-Prot
Match: HAT1_ARATH (Homeobox-leucine zipper protein HAT1 OS=Arabidopsis thaliana GN=HAT1 PE=2 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 9.372e-27 Identity = 61/105 (58.10%), Postives = 77/105 (73.33%), Query Frame = -2 Query: 328 ESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSKLKQTEMECEYLKRWFGSLTEQNRRLQREVEELRAMKVGPPTVISPHSCEPLPASTLSMCPRCERV 642 ++F+ ++TLNPKQK LA +L L RQVEVWFQNRRAR+KLKQTE++CEYLKR LTE+NRRL++E ELRA+K+ P + P +TL MCP CERV Sbjct: 149 DTFKEHNTLNPKQKLALAKKLGLTARQVEVWFQNRRARTKLKQTEVDCEYLKRCVEKLTEENRRLEKEAAELRALKLSPRLY-----GQMSPPTTLLMCPSCERV 248
BLAST of CN184605 vs. ExPASy Swiss-Prot
Match: HOX7_ORYSI (Homeobox-leucine zipper protein HOX7 OS=Oryza sativa subsp. indica GN=HOX7 PE=1 SV=2) HSP 1 Score: 117.857 bits (294), Expect = 4.651e-26 Identity = 65/142 (45.77%), Postives = 87/142 (61.27%), Query Frame = -2 Query: 238 ESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSKLKQTEMECEYLKRWFGSLTEQNRRLQREVEELR-AMKVGPPTVISPHSCEPLPA---STLSMCPRCER---VTTTAVDKGPTKVTTASSTPAALSPKVGTPA 642 +SF+ + TL PKQK +LA +L L+PRQVEVWFQNRRAR+KLKQTE++CE+LKR LT +NRRLQREV ELR A++ + + LPA + +CP CE V A + +V PAA++ P+ Sbjct: 167 DSFKEHSTLTPKQKSDLANRLNLRPRQVEVWFQNRRARTKLKQTEVDCEHLKRCCERLTRENRRLQREVAELRGALRTTTSSYPPLYGLHHLPAAAGTVFRVCPSCEHSKVVAAAASESFSPRVFAGGGAPAAITAAAAVPS 308
BLAST of CN184605 vs. ExPASy Swiss-Prot
Match: HOX7_ORYSJ (Homeobox-leucine zipper protein HOX7 OS=Oryza sativa subsp. japonica GN=HOX7 PE=1 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 7.934e-26 Identity = 63/142 (44.37%), Postives = 82/142 (57.75%), Query Frame = -2 Query: 238 ESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSKLKQTEMECEYLKRWFGSLTEQNRRLQREVEE----LRAMKVGPPTVISPHSCEPLPASTLSMCPRCER---VTTTAVDKGPTKVTTASSTPAALSPKVGTPA 642 +SF+ + TL PKQK +LA +L L+PRQVEVWFQNRRAR+KLKQTE++CE+LKR LT +NRRLQREV E LR P + H + +CP CE V A + +V PAA++ P+ Sbjct: 167 DSFKEHSTLTPKQKSDLANRLNLRPRQVEVWFQNRRARTKLKQTEVDCEHLKRCCERLTRENRRLQREVAELRGTLRTTTSSYPPLYGLHHLPAAAGTVFRVCPSCEHSKVVAAAASESFSPRVFAGGGAPAAITAAAAVPS 308 The following BLAST results are available for this feature:
BLAST of CN184605 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 35
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Sequences
The
following sequences are available for this feature:
EST sequence >CN184605 ID=CN184605; Name=CN184605; organism=Citrus sinensis; type=EST; length=643bpback to top |