CN184605
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN184605 vs. ExPASy Swiss-Prot
Match: HOX18_ORYSI (Homeobox-leucine zipper protein HOX18 OS=Oryza sativa subsp. indica GN=HOX18 PE=2 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.496e-24 Identity = 60/125 (48.00%), Postives = 82/125 (65.60%), Query Frame = -2 Query: 280 ESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSKLKQTEMECEYLKRWFGSLTEQNRRLQREVEELRAMKVGPPTVISPHSCEPLP----ASTLSMCPRCERVTTTAVDKGPTKVTTAS 642 +SFR ++ L+ QK ELA QLKLKPRQVEVWFQNRRAR+KLKQTE++CE+LKR SLTE+N++L+ E+ ELR + P A+ +++CP CE+VT G T +++S Sbjct: 129 DSFRVHNILSHAQKHELARQLKLKPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCESLTEENKQLKHELMELRRLASAAAAAAGSQLYVQFPRAAAAAMVNVCPSCEKVTVMGGGGGETGKSSSS 253
BLAST of CN184605 vs. ExPASy Swiss-Prot
Match: HOX18_ORYSJ (Homeobox-leucine zipper protein HOX18 OS=Oryza sativa subsp. japonica GN=HOX18 PE=2 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 2.552e-24 Identity = 60/125 (48.00%), Postives = 82/125 (65.60%), Query Frame = -2 Query: 280 ESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSKLKQTEMECEYLKRWFGSLTEQNRRLQREVEELRAMKVGPPTVISPHSCEPLP----ASTLSMCPRCERVTTTAVDKGPTKVTTAS 642 +SFR ++ L+ QK ELA QLKLKPRQVEVWFQNRRAR+KLKQTE++CE+LKR SLTE+N++L+ E+ ELR + P A+ +++CP CE+VT G T +++S Sbjct: 129 DSFRVHNILSHAQKHELARQLKLKPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCESLTEENKQLKHELMELRRLASPAAAAAGSQLYVQFPRAAAAAMVNVCPSCEKVTVMGGGGGETGKSSSS 253
BLAST of CN184605 vs. ExPASy Swiss-Prot
Match: HOX26_ORYSJ (Putative homeobox-leucine zipper protein HOX26 OS=Oryza sativa subsp. japonica GN=HOX26 PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 9.394e-19 Identity = 48/102 (47.06%), Postives = 64/102 (62.75%), Query Frame = -2 Query: 337 ESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSKLKQTEMECEYLKRWFGSLTEQNRRLQREVEELRAMKVGPPTVISPHSCEPLPASTLSMCPRC 642 +SFR ++ L+ +K+ELA +L L RQVEVWFQNRRAR+KLKQTE +C+ L+RW L N RL+R++ ELR PP L +T +CP C Sbjct: 131 DSFRAHNILSHAEKQELAGKLGLSARQVEVWFQNRRARTKLKQTEADCDLLRRWCDHLAADNARLRRDLAELRRSSSSPPV-------SGLAVATPVVCPSC 225
BLAST of CN184605 vs. ExPASy Swiss-Prot
Match: ATB23_ARATH (Homeobox-leucine zipper protein ATHB-23 OS=Arabidopsis thaliana GN=ATHB-23 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.112e-11 Identity = 40/97 (41.24%), Postives = 59/97 (60.82%), Query Frame = -2 Query: 352 ESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSKLKQTEMECEYLKRWFGSLTEQNRRLQREVEELRAMKVGPPTVISPHSCEPLPASTLS 642 + F + L +K ELA L L+PRQ+ +WFQNRRARSK KQ E + + LKR F SL ++N LQ + ++L+A V++ S EP+ + L+ Sbjct: 85 KDFELGNKLESDRKLELARALGLQPRQIAIWFQNRRARSKTKQLEKDYDMLKRQFESLRDENEVLQTQNQKLQAQ------VMALKSREPIESINLN 175
BLAST of CN184605 vs. ExPASy Swiss-Prot
Match: ATB13_ARATH (Homeobox-leucine zipper protein ATHB-13 OS=Arabidopsis thaliana GN=ATHB-13 PE=2 SV=2) HSP 1 Score: 67.0106 bits (162), Expect = 9.416e-11 Identity = 34/78 (43.59%), Postives = 51/78 (65.38%), Query Frame = -2 Query: 409 ESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSKLKQTEMECEYLKRWFGSLTEQNRRLQREVEELRAMKVG 642 ++F + L P++K +LA L L+PRQ+ +WFQNRRAR K KQ E + + LKR F +L +N LQ ++L+A +G Sbjct: 99 KNFELGNKLEPERKMQLARALGLQPRQIAIWFQNRRARWKTKQLEKDYDTLKRQFDTLKAENDLLQTHNQKLQAEIMG 176 The following BLAST results are available for this feature:
BLAST of CN184605 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 35
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN184605 ID=CN184605; Name=CN184605; organism=Citrus sinensis; type=EST; length=643bpback to top |