CN184588

Overview
NameCN184588
Unique NameCN184588
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length558
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN184588 vs. ExPASy Swiss-Prot
Match: PER59_ARATH (Peroxidase 59 OS=Arabidopsis thaliana GN=PER59 PE=1 SV=2)

HSP 1 Score: 144.436 bits (363), Expect = 3.487e-34
Identity = 72/113 (63.72%), Postives = 86/113 (76.11%), Query Frame = 1
Query:   61 QAQLSPSFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVAL 399
            +AQLSP  Y+ +CPN++  +   +  A  ++IR+ ASLIRLHFHDCFV+GCDAS+LLD     DSEK A PN NSARGFEVID +KAAVE ACP VVSCADILT+AA  SV L
Sbjct:   27 RAQLSPDIYAKSCPNLVQIVRKQVAIALKAEIRMAASLIRLHFHDCFVNGCDASLLLDGA---DSEKLAIPNINSARGFEVIDTIKAAVENACPGVVSCADILTLAARDSVVL 136          
BLAST of CN184588 vs. ExPASy Swiss-Prot
Match: PER68_ARATH (Peroxidase 68 OS=Arabidopsis thaliana GN=PER68 PE=2 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 1.325e-33
Identity = 70/118 (59.32%), Postives = 87/118 (73.73%), Query Frame = 1
Query:   49 GSPSQAQLSPSFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALV 402
            GS +QAQL   FYS +CP++L T+  V+++  + + RI ASL+RL FHDCFV+GCDASILLD T +   EK A PNNNS RG+EVID +K+ VER CP VVSCADIL I A  SV L+
Sbjct:   23 GSQAQAQLRTDFYSDSCPSLLPTVRRVVQREVAKERRIAASLLRLFFHDCFVNGCDASILLDDTRSFLGEKTAGPNNNSVRGYEVIDAIKSRVERLCPGVVSCADILAITARDSVLLM 140          
BLAST of CN184588 vs. ExPASy Swiss-Prot
Match: PER1_ARAHY (Cationic peroxidase 1 OS=Arachis hypogaea GN=PNC1 PE=1 SV=2)

HSP 1 Score: 142.51 bits (358), Expect = 1.325e-33
Identity = 67/110 (60.91%), Postives = 82/110 (74.55%), Query Frame = 1
Query:   64 AQLSPSFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSV 393
            AQLS +FY++ CPN L+TI+  +  A + + R+GASL+RLHFHDCFV GCDAS+LLD T+    EK A PN NS RGFEVID +K+ VE  CP VVSCADIL +AA  SV
Sbjct:   22 AQLSSNFYATKCPNALSTIKSAVNSAVAKEARMGASLLRLHFHDCFVQGCDASVLLDDTSNFTGEKTAGPNANSIRGFEVIDTIKSQVESLCPGVVSCADILAVAARDSV 131          
BLAST of CN184588 vs. ExPASy Swiss-Prot
Match: PERP7_BRARA (Peroxidase P7 OS=Brassica rapa PE=1 SV=3)

HSP 1 Score: 141.354 bits (355), Expect = 2.952e-33
Identity = 67/109 (61.47%), Postives = 88/109 (80.73%), Query Frame = 1
Query:   67 QLSPSFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSV 393
            QL+ +FYS++CPN+L+T++  +K A SS  R+GAS++RL FHDCFV+GCD SILLD T++   E+ A PN NSARGF VI+++K+AVE+ACP VVSCADIL IAA  SV
Sbjct:    1 QLTTNFYSTSCPNLLSTVKSGVKSAVSSQPRMGASILRLFFHDCFVNGCDGSILLDDTSSFTGEQNAGPNRNSARGFTVINDIKSAVEKACPGVVSCADILAIAARDSV 109          
BLAST of CN184588 vs. ExPASy Swiss-Prot
Match: PER4_VITVI (Peroxidase 4 OS=Vitis vinifera GN=GSVIVT00023967001 PE=1 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 8.588e-33
Identity = 66/115 (57.39%), Postives = 85/115 (73.91%), Query Frame = 1
Query:   58 SQAQLSPSFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALV 402
            S AQLS +FYS TCP V +T++  ++ A S + R+GASL+RL FHDCFV+GCDAS+LLD T++   E+ A PN NS RG  VIDN+K+ VE  CP VVSCADI+ IAA  SV ++
Sbjct:   23 SSAQLSTNFYSKTCPKVFDTVKSGVQSAVSKERRMGASLLRLFFHDCFVNGCDASVLLDDTSSFTGEQTAVPNKNSIRGLNVIDNIKSQVESVCPGVVSCADIIAIAARDSVVIL 137          
BLAST of CN184588 vs. ExPASy Swiss-Prot
Match: PER4_ARATH (Peroxidase 4 OS=Arabidopsis thaliana GN=PER4 PE=2 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 3.263e-32
Identity = 66/108 (61.11%), Postives = 83/108 (76.85%), Query Frame = 1
Query:   58 SQAQLSPSFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAA 381
            SQAQLSP+FY  TC N L+TI   ++ A S + R+ ASLIRLHFHDCFV+GCDAS++L +T T++SE+ +  N  SARGFEVID  K+AVE  CP VVSCADI+ +AA
Sbjct:   17 SQAQLSPTFYDQTCQNALSTIRSSIRTAISRERRMAASLIRLHFHDCFVNGCDASVMLVATPTMESERDSLANFQSARGFEVIDQAKSAVESVCPGVVSCADIIAVAA 124          
BLAST of CN184588 vs. ExPASy Swiss-Prot
Match: PER9_ARATH (Peroxidase 9 OS=Arabidopsis thaliana GN=PER9 PE=1 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 1.620e-31
Identity = 66/117 (56.41%), Postives = 81/117 (69.23%), Query Frame = 1
Query:   49 GSPSQAQLSPSFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVAL 399
            G    + L P FY  +CP     +  VL+KA + + R+ ASL+RLHFHDCFV GCDASILLD + TI SEK A PN NS RGF+VID +KA +E+ACP+ VSCADIL +AA  S  L
Sbjct:   38 GGSFYSNLYPQFYQFSCPQADEIVMTVLEKAIAKEPRMAASLLRLHFHDCFVQGCDASILLDDSATIRSEKNAGPNKNSVRGFQVIDEIKAKLEQACPQTVSCADILALAARGSTIL 154          
BLAST of CN184588 vs. ExPASy Swiss-Prot
Match: PER5_ARATH (Peroxidase 5 OS=Arabidopsis thaliana GN=PER5 PE=2 SV=2)

HSP 1 Score: 135.576 bits (340), Expect = 1.620e-31
Identity = 63/107 (58.88%), Postives = 81/107 (75.70%), Query Frame = 1
Query:   61 QAQLSPSFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAA 381
            QAQLSP+FY  +C N L+ I   ++ A + + R+ ASLIR+HFHDCFV GCDASILL+ T+TI+SE+ A PN  S RGFEVID  K+ VE+ CP +VSCADI+ +AA
Sbjct:   23 QAQLSPTFYDQSCRNALSKIRSSVRTAIARERRMAASLIRMHFHDCFVHGCDASILLEGTSTIESERDALPNFKSVRGFEVIDKAKSEVEKVCPGIVSCADIIAVAA 129          
BLAST of CN184588 vs. ExPASy Swiss-Prot
Match: PER36_ARATH (Peroxidase 36 OS=Arabidopsis thaliana GN=PER36 PE=2 SV=2)

HSP 1 Score: 135.576 bits (340), Expect = 1.620e-31
Identity = 60/118 (50.85%), Postives = 86/118 (72.88%), Query Frame = 1
Query:   46 EGSPSQAQLSPSFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVAL 399
            + + S A LSP FY ++CPN    ++  +  A+ +D R+ AS++RLHFHDCFV+GCDAS+LLDS+ T++SEK +  N +SARGFEVID +K+A+E  CP  VSCAD+L + A  S+ +
Sbjct:   33 QSTSSVASLSPQFYENSCPNAQAIVQSYVANAYFNDPRMAASILRLHFHDCFVNGCDASVLLDSSGTMESEKRSNANRDSARGFEVIDEIKSALENECPETVSCADLLALVARDSIVI 150          
BLAST of CN184588 vs. ExPASy Swiss-Prot
Match: PER70_MAIZE (Peroxidase 70 OS=Zea mays GN=PER70 PE=1 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 2.115e-31
Identity = 65/112 (58.04%), Postives = 80/112 (71.43%), Query Frame = 1
Query:   58 SQAQLSPSFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSV 393
            + AQLSP+FYS +CP  L TI+  +  A + + R+GASL+RLHFHDCFV GCD S+LL+ T T   E+ A PN  S RGF V+DN+KA VE  CP VVSCADIL +AA  SV
Sbjct:   23 ASAQLSPTFYSRSCPRALATIKAAVTAAVAQEARMGASLLRLHFHDCFVQGCDGSVLLNDTATFTGEQTANPNVGSIRGFGVVDNIKAQVEAVCPGVVSCADILAVAARDSV 134          
The following BLAST results are available for this feature:
BLAST of CN184588 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 108
Match NameE-valueIdentityDescription
PER59_ARATH3.487e-3463.72Peroxidase 59 OS=Arabidopsis thaliana GN=PER59 PE=... [more]
PER68_ARATH1.325e-3359.32Peroxidase 68 OS=Arabidopsis thaliana GN=PER68 PE=... [more]
PER1_ARAHY1.325e-3360.91Cationic peroxidase 1 OS=Arachis hypogaea GN=PNC1 ... [more]
PERP7_BRARA2.952e-3361.47Peroxidase P7 OS=Brassica rapa PE=1 SV=3[more]
PER4_VITVI8.588e-3357.39Peroxidase 4 OS=Vitis vinifera GN=GSVIVT0002396700... [more]
PER4_ARATH3.263e-3261.11Peroxidase 4 OS=Arabidopsis thaliana GN=PER4 PE=2 ... [more]
PER9_ARATH1.620e-3156.41Peroxidase 9 OS=Arabidopsis thaliana GN=PER9 PE=1 ... [more]
PER5_ARATH1.620e-3158.88Peroxidase 5 OS=Arabidopsis thaliana GN=PER5 PE=2 ... [more]
PER36_ARATH1.620e-3150.85Peroxidase 36 OS=Arabidopsis thaliana GN=PER36 PE=... [more]
PER70_MAIZE2.115e-3158.04Peroxidase 70 OS=Zea mays GN=PER70 PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0005L24_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0005L24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184588 ID=CN184588; Name=CN184588; organism=Citrus sinensis; type=EST; length=558bp
GAGGGTTATCTTCTCGCAGCAGCTCTTCTTGTTGCTTTTGTGCTTGAGGG
ATCACCATCTCAAGCTCAACTTTCTCCATCTTTTTATTCTTCCACATGCC
CTAATGTATTGAACACTATCGAGGATGTGCTTAAGAAAGCTTTCTCGTCC
GATATCCGGATCGGTGCCAGCCTCATCAGGCTTCATTTCCATGACTGTTT
TGTTGATGGGTGTGATGCATCGATTTTGCTGGACAGCACTAACACCATAG
ACAGCGAGAAATTTGCTGCGCCAAATAACAATTCGGCGAGGGGTTTTGAA
GTTATTGATAACATGAAAGCTGCCGTTGAAAGGGCATGTCCAAGGGTTGT
TTCCTGCGCTGATATTCTTACTATTGCGGCTGAACGATCCGTTGCTTTGG
TAATGAATTTCTATTACCAACTCCTCTTCCTGGTTAATATTTTACGCTTA
GAAGTAAATTAATATGGGTATCAGAATAAGTTAAGAGAATAATGGTAAAC
CTTTGCAGTATTAATGTAATTTTTAACTATTTTTTTCAATTAATAATAAC
CCCTATAA
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