CN184588

Overview
NameCN184588
Unique NameCN184588
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length558
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN184588 vs. ExPASy Swiss-Prot
Match: PER72_ARATH (Peroxidase 72 OS=Arabidopsis thaliana GN=PER72 PE=1 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 2.763e-31
Identity = 64/114 (56.14%), Postives = 80/114 (70.18%), Query Frame = 1
Query:   58 SQAQLSPSFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVAL 399
            S   L P FY  +CP     ++ ++ KAF  D R+ ASL+RLHFHDCFV GCDASILLDS+ TI SEK + PN NSARGFE+I+ +K A+E+ CP  VSCADIL +AA  S  +
Sbjct:   29 SGGYLFPQFYDQSCPKAQEIVQSIVAKAFEHDPRMPASLLRLHFHDCFVKGCDASILLDSSGTIISEKRSNPNRNSARGFELIEEIKHALEQECPETVSCADILALAARDSTVI 142          
BLAST of CN184588 vs. ExPASy Swiss-Prot
Match: PER67_ARATH (Peroxidase 67 OS=Arabidopsis thaliana GN=PER67 PE=2 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 1.371e-30
Identity = 63/117 (53.85%), Postives = 84/117 (71.79%), Query Frame = 1
Query:   52 SPSQAQLSPSFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALV 402
            S S+AQL+  FY  +CP++   +  V+K+A + + R+GASL+RL FHDCFV+GCD S+LLD T +   EK + P+NNS RGFEVID +K  VE+ CP +VSCADIL I A  SV L+
Sbjct:   15 SQSEAQLNRDFYKESCPSLFLVVRRVVKRAVAREPRMGASLLRLFFHDCFVNGCDGSLLLDDTPSFLGEKTSGPSNNSVRGFEVIDKIKFKVEKMCPGIVSCADILAITARDSVLLL 131          
BLAST of CN184588 vs. ExPASy Swiss-Prot
Match: PER14_ARATH (Peroxidase 14 OS=Arabidopsis thaliana GN=PER14 PE=2 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 3.054e-30
Identity = 61/114 (53.51%), Postives = 80/114 (70.18%), Query Frame = 1
Query:   58 SQAQLSPSFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVAL 399
            ++  L P FY S+CP     +  V+ KAF  + R+ ASL+RLHFHDCFV GCD S+LLD++ +I +EK + PN+ SARGFEV+D +KAA+E  CP  VSCAD LT+AA  S  L
Sbjct:   31 NKRNLFPDFYRSSCPRAEEIVRSVVAKAFERETRMAASLMRLHFHDCFVQGCDGSLLLDTSGSIVTEKNSNPNSRSARGFEVVDEIKAALENECPNTVSCADALTLAARDSSVL 144          
BLAST of CN184588 vs. ExPASy Swiss-Prot
Match: PER58_ARATH (Peroxidase 58 OS=Arabidopsis thaliana GN=PER58 PE=2 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 1.161e-29
Identity = 65/119 (54.62%), Postives = 85/119 (71.43%), Query Frame = 1
Query:   49 GSPSQAQLSPSFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDS--TNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVAL 399
            G  S AQL+  FYS+TCPNV      ++++A  +D+R+ A ++RLHFHDCFV+GCD S+LLD+   + ++ EK A  N  S  GFEVID++K A+E  CP VVSCADIL IAAE SVAL
Sbjct:   18 GVLSNAQLTSDFYSTTCPNVTAIARGLIERASRNDVRLTAKVMRLHFHDCFVNGCDGSVLLDAAPADGVEGEKEAFQNAGSLDGFEVIDDIKTALENVCPGVVSCADILAIAAEISVAL 136          
BLAST of CN184588 vs. ExPASy Swiss-Prot
Match: PER15_ARATH (Peroxidase 15 OS=Arabidopsis thaliana GN=PER15 PE=2 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 1.516e-29
Identity = 60/113 (53.10%), Postives = 79/113 (69.91%), Query Frame = 1
Query:   61 QAQLSPSFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVAL 399
            +  L P FY S+CP     +  V+ KA + + R+ ASL+RLHFHDCFV GCD S+LLD++ +I +EK + PN+ SARGFEV+D +KAA+E  CP  VSCAD LT+AA  S  L
Sbjct:   33 KGNLFPGFYRSSCPRAEEIVRSVVAKAVARETRMAASLMRLHFHDCFVQGCDGSLLLDTSGSIVTEKNSNPNSRSARGFEVVDEIKAALENECPNTVSCADALTLAARDSSVL 145          
BLAST of CN184588 vs. ExPASy Swiss-Prot
Match: PERX_TOBAC (Lignin-forming anionic peroxidase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 1.980e-29
Identity = 65/124 (52.42%), Postives = 86/124 (69.35%), Query Frame = 1
Query:   58 SQAQLSPSFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALVMNFYYQLLF 429
            S AQLS +FY +TCPNV + +  V+ +   +D R GA +IRLHFHDCFV+GCD SILLD+  T  +EK  AP N  A GF+++D++K A+E  CP VVSCADIL +A+E  V L     +Q+LF
Sbjct:   20 SNAQLSATFYDTTCPNVTSIVRGVMDQRQRTDARAGAKIIRLHFHDCFVNGCDGSILLDTDGT-QTEK-DAPANVGAGGFDIVDDIKTALENVCPGVVSCADILALASEIGVVLAKGPSWQVLF 141          
BLAST of CN184588 vs. ExPASy Swiss-Prot
Match: PER49_ARATH (Peroxidase 49 OS=Arabidopsis thaliana GN=PER49 PE=2 SV=2)

HSP 1 Score: 127.487 bits (319), Expect = 4.411e-29
Identity = 57/111 (51.35%), Postives = 80/111 (72.07%), Query Frame = 1
Query:   67 QLSPSFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVAL 399
            +L P +Y+ +CP V   +  V+ KA + + R+ ASL+RLHFHDCFV GCD S+LLDS+  + +EK + PN+ SARGF+V+D +KA +E+ CP  VSCAD+LT+AA  S  L
Sbjct:   29 KLFPGYYAHSCPQVNEIVRSVVAKAVARETRMAASLLRLHFHDCFVQGCDGSLLLDSSGRVATEKNSNPNSKSARGFDVVDQIKAELEKQCPGTVSCADVLTLAARDSSVL 139          
BLAST of CN184588 vs. ExPASy Swiss-Prot
Match: PER2_ORYSJ (Peroxidase 2 OS=Oryza sativa subsp. japonica GN=PRX112 PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 9.826e-29
Identity = 62/114 (54.39%), Postives = 79/114 (69.30%), Query Frame = 1
Query:   52 SPSQAQLSPSFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSV 393
            S + AQLS +FY ++CPN L+TI+  +  A +S+ R+GASL+RLHFHDCFV GCDAS+LL        E+ A PN  S RGF V+DN+K  VE  C + VSCADIL +AA  SV
Sbjct:   19 SAASAQLSATFYDTSCPNALSTIKSAVTAAVNSEPRMGASLVRLHFHDCFVQGCDASVLLSG-----QEQNAGPNAGSLRGFNVVDNIKTQVEAICSQTVSCADILAVAARDSV 127          
BLAST of CN184588 vs. ExPASy Swiss-Prot
Match: PER2_ORYSI (Peroxidase 2 OS=Oryza sativa subsp. indica GN=PRX112 PE=3 SV=2)

HSP 1 Score: 126.331 bits (316), Expect = 9.826e-29
Identity = 62/114 (54.39%), Postives = 79/114 (69.30%), Query Frame = 1
Query:   52 SPSQAQLSPSFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSV 393
            S + AQLS +FY ++CPN L+TI+  +  A +S+ R+GASL+RLHFHDCFV GCDAS+LL        E+ A PN  S RGF V+DN+K  VE  C + VSCADIL +AA  SV
Sbjct:   19 SAASAQLSATFYDTSCPNALSTIKSAVTAAVNSEPRMGASLVRLHFHDCFVQGCDASVLLSG-----QEQNAGPNAGSLRGFNVVDNIKTQVEAICSQTVSCADILAVAARDSV 127          
BLAST of CN184588 vs. ExPASy Swiss-Prot
Match: PER1_HORVU (Peroxidase 1 OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 8.318e-28
Identity = 62/112 (55.36%), Postives = 78/112 (69.64%), Query Frame = 1
Query:   58 SQAQLSPSFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSV 393
            + AQLSP+FY ++CP  L TI+  +  A +SD R+GASL+RLHFHDCFV GCDAS+LL        E+ A PN  S RGF VID++K  +E  C + VSCADILT+AA  SV
Sbjct:   19 ASAQLSPTFYDTSCPRALATIKSGVMAAVTSDPRMGASLLRLHFHDCFVQGCDASVLLSG-----MEQNAIPNAGSLRGFGVIDSIKTQIEAICKQTVSCADILTVAARDSV 125          
The following BLAST results are available for this feature:
BLAST of CN184588 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 108
Match NameE-valueIdentityDescription
PER72_ARATH2.763e-3156.14Peroxidase 72 OS=Arabidopsis thaliana GN=PER72 PE=... [more]
PER67_ARATH1.371e-3053.85Peroxidase 67 OS=Arabidopsis thaliana GN=PER67 PE=... [more]
PER14_ARATH3.054e-3053.51Peroxidase 14 OS=Arabidopsis thaliana GN=PER14 PE=... [more]
PER58_ARATH1.161e-2954.62Peroxidase 58 OS=Arabidopsis thaliana GN=PER58 PE=... [more]
PER15_ARATH1.516e-2953.10Peroxidase 15 OS=Arabidopsis thaliana GN=PER15 PE=... [more]
PERX_TOBAC1.980e-2952.42Lignin-forming anionic peroxidase OS=Nicotiana tab... [more]
PER49_ARATH4.411e-2951.35Peroxidase 49 OS=Arabidopsis thaliana GN=PER49 PE=... [more]
PER2_ORYSJ9.826e-2954.39Peroxidase 2 OS=Oryza sativa subsp. japonica GN=PR... [more]
PER2_ORYSI9.826e-2954.39Peroxidase 2 OS=Oryza sativa subsp. indica GN=PRX1... [more]
PER1_HORVU8.318e-2855.36Peroxidase 1 OS=Hordeum vulgare PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0005L24_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0005L24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184588 ID=CN184588; Name=CN184588; organism=Citrus sinensis; type=EST; length=558bp
GAGGGTTATCTTCTCGCAGCAGCTCTTCTTGTTGCTTTTGTGCTTGAGGG
ATCACCATCTCAAGCTCAACTTTCTCCATCTTTTTATTCTTCCACATGCC
CTAATGTATTGAACACTATCGAGGATGTGCTTAAGAAAGCTTTCTCGTCC
GATATCCGGATCGGTGCCAGCCTCATCAGGCTTCATTTCCATGACTGTTT
TGTTGATGGGTGTGATGCATCGATTTTGCTGGACAGCACTAACACCATAG
ACAGCGAGAAATTTGCTGCGCCAAATAACAATTCGGCGAGGGGTTTTGAA
GTTATTGATAACATGAAAGCTGCCGTTGAAAGGGCATGTCCAAGGGTTGT
TTCCTGCGCTGATATTCTTACTATTGCGGCTGAACGATCCGTTGCTTTGG
TAATGAATTTCTATTACCAACTCCTCTTCCTGGTTAATATTTTACGCTTA
GAAGTAAATTAATATGGGTATCAGAATAAGTTAAGAGAATAATGGTAAAC
CTTTGCAGTATTAATGTAATTTTTAACTATTTTTTTCAATTAATAATAAC
CCCTATAA
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