CN184588

Overview
NameCN184588
Unique NameCN184588
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length558
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN184588 vs. ExPASy Swiss-Prot
Match: PER10_ARATH (Peroxidase 10 OS=Arabidopsis thaliana GN=PER10 PE=1 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 1.853e-27
Identity = 56/112 (50.00%), Postives = 77/112 (68.75%), Query Frame = 1
Query:   64 AQLSPSFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVAL 399
            + L+  FY  +CP +   ++  + +AF  D RI ASL+RLHFHDCFV+GCD SILL+ +     EK A PN NS RGFEVI+++K+ +E +CP  VSCADI+ +AA  +V L
Sbjct:   46 SNLNYRFYDRSCPRLQTIVKSGVWRAFKDDSRIAASLLRLHFHDCFVNGCDGSILLNDSEDFKGEKNAQPNRNSVRGFEVIEDIKSDIESSCPLTVSCADIVALAAREAVVL 157          
BLAST of CN184588 vs. ExPASy Swiss-Prot
Match: PER2_CUCSA (Peroxidase 2 (Fragment) OS=Cucumis sativus PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 2.420e-27
Identity = 60/107 (56.07%), Postives = 78/107 (72.90%), Query Frame = 1
Query:   79 SFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVAL 399
            +FY  +CP+V N +  V+++A  SD R GA LIRLHFHDCFV+GCD S+LL+    + SE  AAP N +  GF +++N+KAAVE+ACP VVSCADIL IA+  SV L
Sbjct:    1 TFYDESCPDVSNIVRRVVQQALVSDERAGARLIRLHFHDCFVNGCDGSVLLEDQPGVVSE-LAAPGNANITGFNIVNNIKAAVEKACPGVVSCADILAIASVGSVNL 106          
BLAST of CN184588 vs. ExPASy Swiss-Prot
Match: PER1_MAIZE (Peroxidase 1 OS=Zea mays GN=PER1 PE=1 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 3.161e-27
Identity = 61/123 (49.59%), Postives = 80/123 (65.04%), Query Frame = 1
Query:   58 SQAQLSPSFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLD-STNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALVMNFYYQL 423
            ++AQL   FY ++CPN    +   +  AF+ D  I A LIRLHFHDCFV GCD S+LL  +     +E+ A PNN S RGF+VID  K AVE++CPR VSCADI+  AA  S++L  +  YQ+
Sbjct:   31 ARAQLRVGFYDTSCPNAEALVRQAVAAAFAKDAGIAAGLIRLHFHDCFVRGCDGSVLLTVNPGGGQTERDALPNNPSLRGFDVIDAAKTAVEQSCPRTVSCADIVAFAARDSISLTGSVSYQV 153          
BLAST of CN184588 vs. ExPASy Swiss-Prot
Match: PER11_ARATH (Peroxidase 11 OS=Arabidopsis thaliana GN=PER11 PE=1 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 4.128e-27
Identity = 56/118 (47.46%), Postives = 77/118 (65.25%), Query Frame = 1
Query:   70 LSPSFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALVMNFYYQL 423
            L+  +Y STCP V + I+  ++     D R  A +IRLHFHDCFV GCD S+LLD T T+  EK A+PN NS +G++++D +K  +E  CP VVSCAD+LTI A  +  LV   Y+ +
Sbjct:   30 LTLDYYKSTCPTVFDVIKKEMECIVKEDPRNAAIIIRLHFHDCFVQGCDGSVLLDETETLQGEKKASPNINSLKGYKIVDRIKNIIESECPGVVSCADLLTIGARDATILVGGPYWDV 147          
BLAST of CN184588 vs. ExPASy Swiss-Prot
Match: PER28_ARATH (Peroxidase 28 OS=Arabidopsis thaliana GN=PER28 PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 2.676e-26
Identity = 58/112 (51.79%), Postives = 78/112 (69.64%), Query Frame = 1
Query:   64 AQLSPSFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVAL 399
            AQL   FYS +CPN    +E+++++ F+ D  I A+L R+HFHDCFV GCDAS+L+D T +  SEK A P N S RGFE+ID +K A+E  CP  VSC+DI+T+A   +V L
Sbjct:   21 AQLKFKFYSESCPNAETIVENLVRQQFARDPSITAALTRMHFHDCFVQGCDASLLIDPTTSQLSEKNAGP-NFSVRGFELIDEIKTALEAQCPSTVSCSDIVTLATRDAVFL 131          
BLAST of CN184588 vs. ExPASy Swiss-Prot
Match: PER42_MAIZE (Peroxidase 42 OS=Zea mays GN=PER42 PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 5.961e-26
Identity = 58/115 (50.43%), Postives = 80/115 (69.57%), Query Frame = 1
Query:   52 SPSQAQLSPSFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPN-NNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSV 393
            S + AQLS +FY ++CP+ ++TI   +  A +   R+GASL+RLHFHDCF+ GCDASILL+ T+    E+   PN   + R F+V++++KA VE ACP VVSCADIL +AA   V
Sbjct:   25 STASAQLSSTFYDTSCPSAMSTISSGVNSAVAQQARVGASLLRLHFHDCFIQGCDASILLNDTS---GEQTQPPNLTLNPRAFDVVNSIKAQVEAACPGVVSCADILAVAARDGV 136          
BLAST of CN184588 vs. ExPASy Swiss-Prot
Match: PER40_ARATH (Peroxidase 40 OS=Arabidopsis thaliana GN=PER40 PE=2 SV=2)

HSP 1 Score: 116.701 bits (291), Expect = 7.785e-26
Identity = 55/105 (52.38%), Postives = 72/105 (68.57%), Query Frame = 1
Query:   85 YSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVAL 399
            Y ++CP   + +   ++     D R+ ASL+RLHFHDCFV+GCDAS+LLD T  +  EK A PN NS RGFEVID++K+ +E  CP  VSCADIL +AA  SV +
Sbjct:   55 YRNSCPEAESIVYSWVETTVLEDPRMAASLLRLHFHDCFVNGCDASVLLDDTEGLVGEKTAPPNLNSLRGFEVIDSIKSDIESVCPETVSCADILAMAARDSVVV 159          
BLAST of CN184588 vs. ExPASy Swiss-Prot
Match: PER17_ARATH (Peroxidase 17 OS=Arabidopsis thaliana GN=PER17 PE=2 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 7.785e-26
Identity = 56/110 (50.91%), Postives = 75/110 (68.18%), Query Frame = 1
Query:   70 LSPSFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVAL 399
            L P FYS TCP   + +   +KKA   + R  AS++R  FHDCFV+GCDAS+LLD T  +  EK +  N +S R FEV+D++K A+E+ACP  VSCADI+ +AA  +VAL
Sbjct:   23 LRPRFYSETCPEAESIVRREMKKAMIKEARSVASVMRFQFHDCFVNGCDASLLLDDTPNMLGEKLSLSNIDSLRSFEVVDDIKEALEKACPATVSCADIVIMAARDAVAL 132          
BLAST of CN184588 vs. ExPASy Swiss-Prot
Match: PER66_MAIZE (Peroxidase 66 OS=Zea mays GN=PER66 PE=1 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.017e-25
Identity = 59/115 (51.30%), Postives = 78/115 (67.83%), Query Frame = 1
Query:   52 SPSQAQLSPSFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPN-NNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSV 393
            S + AQLS +FY  +CPN L+TI   +  A   + R+GASL+RLHFHDCFV GCDAS+LL+ T+    E+   PN   + RGF V++++KA VE  CP +VSCADIL +AA   V
Sbjct:   25 SAASAQLSSTFYDRSCPNALSTIRSGVNSAVRQEPRVGASLLRLHFHDCFVRGCDASLLLNDTS---GEQSQGPNLTLNPRGFVVVNSIKAQVESVCPGIVSCADILAVAARDGV 136          
BLAST of CN184588 vs. ExPASy Swiss-Prot
Match: PER57_ARATH (Peroxidase 57 OS=Arabidopsis thaliana GN=PER57 PE=1 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 1.328e-25
Identity = 58/112 (51.79%), Postives = 77/112 (68.75%), Query Frame = 1
Query:   64 AQLSPSFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVAL 399
            AQL   FYS +CP     + +++++ F     + A+L+R+HFHDCFV GCDAS+L+DSTN   SEK A P N S R F++ID +KA +E ACP  VSCADI+T+A   SVAL
Sbjct:   22 AQLRVGFYSQSCPQAETIVRNLVRQRFGVTPTVTAALLRMHFHDCFVKGCDASLLIDSTN---SEKTAGP-NGSVREFDLIDRIKAQLEAACPSTVSCADIVTLATRDSVAL 129          
The following BLAST results are available for this feature:
BLAST of CN184588 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 108
Match NameE-valueIdentityDescription
PER10_ARATH1.853e-2750.00Peroxidase 10 OS=Arabidopsis thaliana GN=PER10 PE=... [more]
PER2_CUCSA2.420e-2756.07Peroxidase 2 (Fragment) OS=Cucumis sativus PE=2 SV... [more]
PER1_MAIZE3.161e-2749.59Peroxidase 1 OS=Zea mays GN=PER1 PE=1 SV=1[more]
PER11_ARATH4.128e-2747.46Peroxidase 11 OS=Arabidopsis thaliana GN=PER11 PE=... [more]
PER28_ARATH2.676e-2651.79Peroxidase 28 OS=Arabidopsis thaliana GN=PER28 PE=... [more]
PER42_MAIZE5.961e-2650.43Peroxidase 42 OS=Zea mays GN=PER42 PE=2 SV=1[more]
PER40_ARATH7.785e-2652.38Peroxidase 40 OS=Arabidopsis thaliana GN=PER40 PE=... [more]
PER17_ARATH7.785e-2650.91Peroxidase 17 OS=Arabidopsis thaliana GN=PER17 PE=... [more]
PER66_MAIZE1.017e-2551.30Peroxidase 66 OS=Zea mays GN=PER66 PE=1 SV=1[more]
PER57_ARATH1.328e-2551.79Peroxidase 57 OS=Arabidopsis thaliana GN=PER57 PE=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0005L24_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0005L24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184588 ID=CN184588; Name=CN184588; organism=Citrus sinensis; type=EST; length=558bp
GAGGGTTATCTTCTCGCAGCAGCTCTTCTTGTTGCTTTTGTGCTTGAGGG
ATCACCATCTCAAGCTCAACTTTCTCCATCTTTTTATTCTTCCACATGCC
CTAATGTATTGAACACTATCGAGGATGTGCTTAAGAAAGCTTTCTCGTCC
GATATCCGGATCGGTGCCAGCCTCATCAGGCTTCATTTCCATGACTGTTT
TGTTGATGGGTGTGATGCATCGATTTTGCTGGACAGCACTAACACCATAG
ACAGCGAGAAATTTGCTGCGCCAAATAACAATTCGGCGAGGGGTTTTGAA
GTTATTGATAACATGAAAGCTGCCGTTGAAAGGGCATGTCCAAGGGTTGT
TTCCTGCGCTGATATTCTTACTATTGCGGCTGAACGATCCGTTGCTTTGG
TAATGAATTTCTATTACCAACTCCTCTTCCTGGTTAATATTTTACGCTTA
GAAGTAAATTAATATGGGTATCAGAATAAGTTAAGAGAATAATGGTAAAC
CTTTGCAGTATTAATGTAATTTTTAACTATTTTTTTCAATTAATAATAAC
CCCTATAA
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