CN184588

Overview
NameCN184588
Unique NameCN184588
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length558
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN184588 vs. ExPASy Swiss-Prot
Match: PER64_ARATH (Peroxidase 64 OS=Arabidopsis thaliana GN=PER64 PE=1 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 2.265e-25
Identity = 57/110 (51.82%), Postives = 74/110 (67.27%), Query Frame = 1
Query:   70 LSPSFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVAL 399
            LSP +Y  TCP   + + + +KKA S+D  + A+L+R+HFHDCFV GCD S+LLDS     +EK   P N S   F VIDN K A+E  CP +VSCADIL++AA  +VAL
Sbjct:   23 LSPHYYDHTCPQADHIVTNAVKKAMSNDQTVPAALLRMHFHDCFVRGCDGSVLLDSKGKNKAEK-DGPPNISLHAFYVIDNAKKALEEQCPGIVSCADILSLAARDAVAL 131          
BLAST of CN184588 vs. ExPASy Swiss-Prot
Match: PER60_ARATH (Peroxidase 60 OS=Arabidopsis thaliana GN=PER60 PE=1 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 2.958e-25
Identity = 61/117 (52.14%), Postives = 78/117 (66.67%), Query Frame = 1
Query:   49 GSPSQAQLSPSFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVAL 399
            G     QL   FYS  C NV N +  V+ +AF  D  I  ++IRL+FHDCF +GCDAS+LLD +N   SEK A+P N S RG+EVID++K+AVE+ C RVVSCADI+ +A    V L
Sbjct:   21 GHGCYGQLRLGFYSQNCQNVENIVSKVVGEAFIKDSSIAPAMIRLYFHDCFSNGCDASLLLDGSN---SEKKASP-NLSVRGYEVIDDIKSAVEKECDRVVSCADIIALATRDLVTL 133          
BLAST of CN184588 vs. ExPASy Swiss-Prot
Match: PER2_ZINEL (Basic peroxidase OS=Zinnia elegans GN=POD3 PE=1 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 5.046e-25
Identity = 63/113 (55.75%), Postives = 79/113 (69.91%), Query Frame = 1
Query:   64 AQLSPSFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAA-ERSVAL 399
            AQLS +FY +TCP  L+TI   ++ + SS+ R  A +IRL FHDCFV GCDAS+LL       SE+ A+P N+   G+EVID  KAAVER CP VVSCADIL +AA + SVA+
Sbjct:   30 AQLSTTFYDTTCPTALSTIRTSIRSSVSSNRRNAALVIRLLFHDCFVQGCDASLLLSGAG---SER-ASPANDGVLGYEVIDAAKAAVERVCPGVVSCADILAVAARDASVAV 138          
BLAST of CN184588 vs. ExPASy Swiss-Prot
Match: PER1_ZINEL (Basic peroxidase OS=Zinnia elegans GN=POD1 PE=1 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 5.046e-25
Identity = 63/113 (55.75%), Postives = 79/113 (69.91%), Query Frame = 1
Query:   64 AQLSPSFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAA-ERSVAL 399
            AQLS +FY +TCP  L+TI   ++ + SS+ R  A +IRL FHDCFV GCDAS+LL       SE+ A+P N+   G+EVID  KAAVER CP VVSCADIL +AA + SVA+
Sbjct:   30 AQLSTTFYDTTCPTALSTIRTSIRSSVSSNRRNAALVIRLLFHDCFVQGCDASLLLSGAG---SER-ASPANDGVLGYEVIDAAKAAVERVCPGVVSCADILAVAARDASVAV 138          
BLAST of CN184588 vs. ExPASy Swiss-Prot
Match: PER71_ARATH (Peroxidase 71 OS=Arabidopsis thaliana GN=PER71 PE=1 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 8.608e-25
Identity = 57/114 (50.00%), Postives = 72/114 (63.16%), Query Frame = 1
Query:   82 FYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALVMNFYYQL 423
            FY +TCP     + + +   FSSD RI   ++R+HFHDCFV GCD SIL+   NT   E+ A PN N  +GFEVIDN K  +E ACP VVSCADIL +AA  +V L     +Q+
Sbjct:   39 FYLTTCPRAETIVRNAVNAGFSSDPRIAPGILRMHFHDCFVQGCDGSILISGANT---ERTAGPNLN-LQGFEVIDNAKTQLEAACPGVVSCADILALAARDTVILTQGTGWQV 148          
BLAST of CN184588 vs. ExPASy Swiss-Prot
Match: PER39_ARATH (Peroxidase 39 OS=Arabidopsis thaliana GN=PER39 PE=1 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 8.608e-25
Identity = 51/115 (44.35%), Postives = 76/115 (66.09%), Query Frame = 1
Query:   58 SQAQLSPSFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALV 402
            S+AQL   FY  TCP     ++DV+ +  ++   + A LIR+HFHDCFV GCD SIL+++T++    +  AP N + RGF+ ID +K+A+E  CP +VSCADI+T+A   S+  +
Sbjct:   21 SEAQLKMGFYDQTCPYAEKIVQDVVNQHINNAPSLAAGLIRMHFHDCFVRGCDGSILINATSSNQQVEKLAPPNLTVRGFDFIDKVKSALESKCPGIVSCADIITLATRDSIVAI 135          
BLAST of CN184588 vs. ExPASy Swiss-Prot
Match: PER20_ARATH (Peroxidase 20 OS=Arabidopsis thaliana GN=PER20 PE=2 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 1.468e-24
Identity = 59/119 (49.58%), Postives = 77/119 (64.71%), Query Frame = 1
Query:   70 LSPSFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALVMNFYYQLL 426
            L   FY  +CP     ++  ++ A   D R+ ASL+RL FHDCFV GCDAS+LLD+   + SEK A PN NS RGFEVID +K  +E ACP  VSC+DIL +AA  SV L    ++++L
Sbjct:   30 LLKGFYKESCPLAEEIVKHNIEVAVLKDPRMAASLLRLQFHDCFVLGCDASVLLDTHGDMLSEKQATPNLNSLRGFEVIDYIKYLLEEACPLTVSCSDILALAARDSVFLRGGPWWEVL 148          
BLAST of CN184588 vs. ExPASy Swiss-Prot
Match: PER44_ARATH (Peroxidase 44 OS=Arabidopsis thaliana GN=PER44 PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 1.918e-24
Identity = 57/112 (50.89%), Postives = 71/112 (63.39%), Query Frame = 1
Query:   64 AQLSPSFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVAL 399
            AQL   FYS +CP   + +  V+   F SD  I A+ +R+ FHDCFV GCDAS+L+D      SEK   P N S RG+E+ID  K  +E ACPR VSCADI+T+A   SVAL
Sbjct:   20 AQLRTGFYSRSCPRAESIVASVVANRFRSDKSITAAFLRMQFHDCFVRGCDASLLIDPRPGRPSEKSTGP-NASVRGYEIIDEAKRQLEAACPRTVSCADIVTLATRDSVAL 130          
BLAST of CN184588 vs. ExPASy Swiss-Prot
Match: PER1_WHEAT (Peroxidase OS=Triticum aestivum PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 1.918e-24
Identity = 60/112 (53.57%), Postives = 74/112 (66.07%), Query Frame = 1
Query:   58 SQAQLSPSFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSV 393
            +  QLS +FY ++CP  L  I+  +  A SSD R+GASL+RLHFHDCF  GCDAS+LL        E+ A PN  S RGF VIDN+K  +E  C + VSCADILT+AA  SV
Sbjct:   21 ASGQLSSTFYDTSCPRALVAIKSGVAAAVSSDPRMGASLLRLHFHDCF--GCDASVLLTG-----MEQNAGPNVGSLRGFGVIDNIKTQLESVCKQTVSCADILTVAARDSV 125          
BLAST of CN184588 vs. ExPASy Swiss-Prot
Match: PER13_ARATH (Peroxidase 13 OS=Arabidopsis thaliana GN=PER13 PE=1 SV=2)

HSP 1 Score: 110.538 bits (275), Expect = 5.579e-24
Identity = 58/122 (47.54%), Postives = 80/122 (65.57%), Query Frame = 1
Query:   58 SQAQLSPSFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALVMNFYYQL 423
            S AQL   FYS TCP+  + + DV+++A ++D    A L+RL FHDCFV+GCD SIL+      D E+FAA N   A GF+VID  K+ +ER CP VVSCADI+ +AA  ++A     +Y++
Sbjct:   20 SAAQLQFGFYSETCPSAESIVRDVVQQAVTNDPGKAAVLLRLQFHDCFVEGCDGSILIKHGGN-DDERFAAGNAGVA-GFDVIDEAKSELERFCPGVVSCADIVALAARDAIAEAKGPFYEV 139          
The following BLAST results are available for this feature:
BLAST of CN184588 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 108
Match NameE-valueIdentityDescription
PER64_ARATH2.265e-2551.82Peroxidase 64 OS=Arabidopsis thaliana GN=PER64 PE=... [more]
PER60_ARATH2.958e-2552.14Peroxidase 60 OS=Arabidopsis thaliana GN=PER60 PE=... [more]
PER2_ZINEL5.046e-2555.75Basic peroxidase OS=Zinnia elegans GN=POD3 PE=1 SV... [more]
PER1_ZINEL5.046e-2555.75Basic peroxidase OS=Zinnia elegans GN=POD1 PE=1 SV... [more]
PER71_ARATH8.608e-2550.00Peroxidase 71 OS=Arabidopsis thaliana GN=PER71 PE=... [more]
PER39_ARATH8.608e-2544.35Peroxidase 39 OS=Arabidopsis thaliana GN=PER39 PE=... [more]
PER20_ARATH1.468e-2449.58Peroxidase 20 OS=Arabidopsis thaliana GN=PER20 PE=... [more]
PER44_ARATH1.918e-2450.89Peroxidase 44 OS=Arabidopsis thaliana GN=PER44 PE=... [more]
PER1_WHEAT1.918e-2453.57Peroxidase OS=Triticum aestivum PE=2 SV=1[more]
PER13_ARATH5.579e-2447.54Peroxidase 13 OS=Arabidopsis thaliana GN=PER13 PE=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0005L24_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0005L24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184588 ID=CN184588; Name=CN184588; organism=Citrus sinensis; type=EST; length=558bp
GAGGGTTATCTTCTCGCAGCAGCTCTTCTTGTTGCTTTTGTGCTTGAGGG
ATCACCATCTCAAGCTCAACTTTCTCCATCTTTTTATTCTTCCACATGCC
CTAATGTATTGAACACTATCGAGGATGTGCTTAAGAAAGCTTTCTCGTCC
GATATCCGGATCGGTGCCAGCCTCATCAGGCTTCATTTCCATGACTGTTT
TGTTGATGGGTGTGATGCATCGATTTTGCTGGACAGCACTAACACCATAG
ACAGCGAGAAATTTGCTGCGCCAAATAACAATTCGGCGAGGGGTTTTGAA
GTTATTGATAACATGAAAGCTGCCGTTGAAAGGGCATGTCCAAGGGTTGT
TTCCTGCGCTGATATTCTTACTATTGCGGCTGAACGATCCGTTGCTTTGG
TAATGAATTTCTATTACCAACTCCTCTTCCTGGTTAATATTTTACGCTTA
GAAGTAAATTAATATGGGTATCAGAATAAGTTAAGAGAATAATGGTAAAC
CTTTGCAGTATTAATGTAATTTTTAACTATTTTTTTCAATTAATAATAAC
CCCTATAA
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