CN184588

Overview
NameCN184588
Unique NameCN184588
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length558
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN184588 vs. ExPASy Swiss-Prot
Match: PER7_ARATH (Peroxidase 7 OS=Arabidopsis thaliana GN=PER7 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 7.803e-18
Identity = 47/121 (38.84%), Postives = 73/121 (60.33%), Query Frame = 1
Query:   55 PSQAQLSPSFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALVMNFYY 417
            P    LS ++Y   CP+    +   +++   SD  +G +L+RL FHDC V GCDAS+LLD   T    +  +P + + RGFE+ID++K+ +E++CP  VSCADILT A+  +   +   Y+
Sbjct:   46 PLDNLLSLNYYDRICPDFEKIVVTKVREWTKSDSSLGPALLRLIFHDCGVTGCDASVLLDYEGT----ERRSPASKTLRGFELIDDIKSEMEKSCPGKVSCADILTSASRAATVQLGGPYW 162          
BLAST of CN184588 vs. ExPASy Swiss-Prot
Match: PER51_ARATH (Peroxidase 51 OS=Arabidopsis thaliana GN=PER51 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.019e-17
Identity = 50/117 (42.74%), Postives = 68/117 (58.12%), Query Frame = 1
Query:   58 SQAQLSPSFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSA-RGFEVIDNMKAAVERA--CPRVVSCADILTIAAERSVAL 399
            S AQL   FY+ TCPNV   + + ++K          + +RL+FHDCFV+GCDAS+++ STNT  +EK    N + A  GF+ +   K AV+    C   VSCADILT+A    V L
Sbjct:   23 SSAQLRGDFYAGTCPNVEQIVRNAVQKKIQQTFTTIPATLRLYFHDCFVNGCDASVMIASTNTNKAEKDHEDNLSLAGDGFDTVIKAKEAVDAVPNCRNKVSCADILTMATRDVVNL 139          
BLAST of CN184588 vs. ExPASy Swiss-Prot
Match: PER63_ARATH (Peroxidase 63 OS=Arabidopsis thaliana GN=PER63 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 1.331e-17
Identity = 45/123 (36.59%), Postives = 72/123 (58.54%), Query Frame = 1
Query:   58 SQAQLSPSFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPN-NNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALVMNFYYQL 423
            +++ L+  FYS +CP  L+ I + +     S     A+ +RL FHDCF +GCDAS+L+ ST    +E+ ++ N +    GF+V+   K A+E ACP  VSC+DI+ +A    +  V   YY++
Sbjct:   28 AESHLTVDFYSKSCPKFLDIIRETITNKQISTPTTAAAALRLFFHDCFPNGCDASVLVSSTAFNTAERDSSINLSLPGDGFDVVIRAKTALELACPNTVSCSDIIAVAVRDLLVTVGGPYYEI 150          
BLAST of CN184588 vs. ExPASy Swiss-Prot
Match: PER26_ARATH (Probable peroxidase 26 OS=Arabidopsis thaliana GN=PER26 PE=2 SV=2)

HSP 1 Score: 88.9669 bits (219), Expect = 1.738e-17
Identity = 50/117 (42.74%), Postives = 69/117 (58.97%), Query Frame = 1
Query:   55 PSQAQLSPSFYS--STCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVAL 399
            PS  +L+  +Y   +TC N  N +   ++  + +D  I   L+RL + DCFV GCDAS+LL+  N   SEK  AP N    GF +ID +K  +E+ CP VVSCADIL +A   +V L
Sbjct:   30 PSMQKLTWHYYKVYNTCENAENFVRHQVEIFYKNDKSIAPKLLRLLYSDCFVSGCDASVLLEGPN---SEKM-APQNRGLGGFVLIDKIKIVLEQRCPGVVSCADILNLATRDAVHL 142          
BLAST of CN184588 vs. ExPASy Swiss-Prot
Match: PER1_SORBI (Cationic peroxidase SPC4 (Fragment) OS=Sorghum bicolor PE=1 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 3.873e-17
Identity = 47/124 (37.90%), Postives = 71/124 (57.26%), Query Frame = 1
Query:   46 EGSPSQAQLSPS----FYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPN-NNSARGFEVIDNMKAAVERAC-PRVVSCADILTIAAERSVAL 399
            +G+  Q  L+P     FY  +CP   + +   ++ A   D+ + A L+RLHFHDCFV GCDAS+LLD + T   E+ A PN       F+ I+++   + + C   VVSC+D+L +AA  SV +
Sbjct:   29 DGNARQPPLAPGLSFDFYKRSCPKAESIVRSFVQDAVRRDVGLAAGLLRLHFHDCFVQGCDASVLLDGSATGPGEQQAPPNLTLRPTAFKAINDIHDRLHKECGGTVVSCSDVLALAARDSVVV 152          
BLAST of CN184588 vs. ExPASy Swiss-Prot
Match: PER6_ARATH (Peroxidase 6 OS=Arabidopsis thaliana GN=PER6 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 8.628e-17
Identity = 47/115 (40.87%), Postives = 64/115 (55.65%), Query Frame = 1
Query:   61 QAQLSPSFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNN-SARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALV 402
            QA LS  +Y+ TCP    T+  ++     +        +RL FHDC VDGCDASIL+ ST    SE+ A  N +     F+VI  +K AVE  CP +VSC+DIL  A    +++V
Sbjct:   19 QANLSSDYYTKTCPEFEETLVQIVTDKQIAAPTTAVGTLRLFFHDCMVDGCDASILVASTPRKTSERDADINRSLPGDAFDVITRIKTAVELKCPNIVSCSDILVGATRSLISMV 133          
BLAST of CN184588 vs. ExPASy Swiss-Prot
Match: PER35_ARATH (Peroxidase 35 OS=Arabidopsis thaliana GN=PER35 PE=1 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 1.922e-16
Identity = 47/108 (43.52%), Postives = 65/108 (60.19%), Query Frame = 1
Query:   64 AQLSPSFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSA-RGFEVIDNMKAAVER--ACPRVVSCADILTIA 378
            AQLS  FYS TCPNV   + + ++K          + +RL FHDCFV+GCDAS+++ ST    +EK    N + A  GF+V+   K A++   +C   VSCADILT+A
Sbjct:   25 AQLSRGFYSKTCPNVEQIVRNAVQKKIKKTFVAVPATLRLFFHDCFVNGCDASVMIQSTPKNKAEKDHPDNISLAGDGFDVVIQAKKALDSNPSCRNKVSCADILTLA 132          
BLAST of CN184588 vs. ExPASy Swiss-Prot
Match: PER50_ARATH (Peroxidase 50 OS=Arabidopsis thaliana GN=PER50 PE=1 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 2.510e-16
Identity = 47/117 (40.17%), Postives = 68/117 (58.12%), Query Frame = 1
Query:   58 SQAQLSPSFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSA-RGFEVIDNMKAAVERA--CPRVVSCADILTIAAERSVAL 399
            S AQL  +FY+ +CPNV   + + ++K          + +RL+FHDCFV+GCDAS+++ STN   +EK    N + A  GF+ +   K A++    C   VSCADILT+A    V L
Sbjct:   23 SSAQLRRNFYAGSCPNVEQIVRNAVQKKVQQTFTTIPATLRLYFHDCFVNGCDASVMIASTNNNKAEKDHEENLSLAGDGFDTVIKAKEALDAVPNCRNKVSCADILTMATRDVVNL 139          
BLAST of CN184588 vs. ExPASy Swiss-Prot
Match: PER29_ARATH (Peroxidase 29 OS=Arabidopsis thaliana GN=PER29 PE=2 SV=2)

HSP 1 Score: 84.7297 bits (208), Expect = 3.278e-16
Identity = 43/110 (39.09%), Postives = 63/110 (57.27%), Query Frame = 1
Query:   70 LSPSFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVAL 399
            LS S+Y  TCP V   +   L   F  D    A+L+RL FHDC V GCDASILL+        +  +  N   R  +++ ++K ++E  CP+ VSC+D++ +AA  +VAL
Sbjct:   38 LSYSYYEKTCPKVEEIVRSSLSSMFILDPTSPAALLRLMFHDCQVQGCDASILLEPIRDQQFTELDSAKNFGIRKRDLVGSIKTSLELECPKQVSCSDVIILAARDAVAL 147          
BLAST of CN184588 vs. ExPASy Swiss-Prot
Match: PER19_ARATH (Peroxidase 19 OS=Arabidopsis thaliana GN=PER19 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 4.282e-16
Identity = 51/124 (41.13%), Postives = 67/124 (54.03%), Query Frame = 1
Query:   67 QLSPSFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFA---APNNNSAR--GFEVIDNMKAAVERACPRVVSCADILTIAAERSVALVMNFYYQL 423
            +LS  +YS  CP +   +  V  + F        + IRL FHDCFV+GCD SIL+++     S+K A   A  N   R  GF+ I   KA VE  CP +VSC+DIL IAA   + L    YYQ+
Sbjct:   41 ELSADYYSKKCPQLETLVGSVTSQRFKEVPISAPATIRLFFHDCFVEGCDGSILIETKK--GSKKLAEREAYENKELREEGFDSIIKAKALVESHCPSLVSCSDILAIAARDFIHLAGGPYYQV 162          
The following BLAST results are available for this feature:
BLAST of CN184588 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 108
Match NameE-valueIdentityDescription
PER7_ARATH7.803e-1838.84Peroxidase 7 OS=Arabidopsis thaliana GN=PER7 PE=2 ... [more]
PER51_ARATH1.019e-1742.74Peroxidase 51 OS=Arabidopsis thaliana GN=PER51 PE=... [more]
PER63_ARATH1.331e-1736.59Peroxidase 63 OS=Arabidopsis thaliana GN=PER63 PE=... [more]
PER26_ARATH1.738e-1742.74Probable peroxidase 26 OS=Arabidopsis thaliana GN=... [more]
PER1_SORBI3.873e-1737.90Cationic peroxidase SPC4 (Fragment) OS=Sorghum bic... [more]
PER6_ARATH8.628e-1740.87Peroxidase 6 OS=Arabidopsis thaliana GN=PER6 PE=2 ... [more]
PER35_ARATH1.922e-1643.52Peroxidase 35 OS=Arabidopsis thaliana GN=PER35 PE=... [more]
PER50_ARATH2.510e-1640.17Peroxidase 50 OS=Arabidopsis thaliana GN=PER50 PE=... [more]
PER29_ARATH3.278e-1639.09Peroxidase 29 OS=Arabidopsis thaliana GN=PER29 PE=... [more]
PER19_ARATH4.282e-1641.13Peroxidase 19 OS=Arabidopsis thaliana GN=PER19 PE=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0005L24_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0005L24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184588 ID=CN184588; Name=CN184588; organism=Citrus sinensis; type=EST; length=558bp
GAGGGTTATCTTCTCGCAGCAGCTCTTCTTGTTGCTTTTGTGCTTGAGGG
ATCACCATCTCAAGCTCAACTTTCTCCATCTTTTTATTCTTCCACATGCC
CTAATGTATTGAACACTATCGAGGATGTGCTTAAGAAAGCTTTCTCGTCC
GATATCCGGATCGGTGCCAGCCTCATCAGGCTTCATTTCCATGACTGTTT
TGTTGATGGGTGTGATGCATCGATTTTGCTGGACAGCACTAACACCATAG
ACAGCGAGAAATTTGCTGCGCCAAATAACAATTCGGCGAGGGGTTTTGAA
GTTATTGATAACATGAAAGCTGCCGTTGAAAGGGCATGTCCAAGGGTTGT
TTCCTGCGCTGATATTCTTACTATTGCGGCTGAACGATCCGTTGCTTTGG
TAATGAATTTCTATTACCAACTCCTCTTCCTGGTTAATATTTTACGCTTA
GAAGTAAATTAATATGGGTATCAGAATAAGTTAAGAGAATAATGGTAAAC
CTTTGCAGTATTAATGTAATTTTTAACTATTTTTTTCAATTAATAATAAC
CCCTATAA
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