CN184587

Overview
NameCN184587
Unique NameCN184587
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length522
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN184587 vs. ExPASy Swiss-Prot
Match: PER15_IPOBA (Peroxidase 15 OS=Ipomoea batatas GN=pod PE=1 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 1.847e-36
Identity = 75/117 (64.10%), Postives = 90/117 (76.92%), Query Frame = -3
Query:  125 SPSQAQLSPSFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDST-NTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVAL 472
            S S AQLS +FYS+TCPNV   +  V+++A  +D RIG SLIRLHFHDCFVDGCD S+LLD+   TI SEK A PN NS RGF+V+DN+K AVE ACP VVSC DIL +A+E SV+L
Sbjct:   19 SHSNAQLSSTFYSTTCPNVSAIVRTVVQQALQNDARIGGSLIRLHFHDCFVDGCDGSLLLDNNGTTIVSEKDALPNTNSTRGFDVVDNIKTAVENACPGVVSCVDILALASESSVSL 135          
BLAST of CN184587 vs. ExPASy Swiss-Prot
Match: PER2_ARMRU (Peroxidase C2 OS=Armoracia rusticana GN=PRXC2 PE=3 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 2.412e-36
Identity = 74/116 (63.79%), Postives = 89/116 (76.72%), Query Frame = -3
Query:  125 SPSQAQLSPSFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVAL 472
            S S AQLSPSFY  TCP V +   + +K A  SD RI AS++RLHFHDCFV+GCDASILLD+T +  +EK A  N  SARGF+VID MKAAVE+ACP+ VSCAD+L IAA++SV L
Sbjct:   20 SLSHAQLSPSFYDKTCPQVFDIATNTIKTALRSDPRIAASILRLHFHDCFVNGCDASILLDNTTSFRTEKDAFGNARSARGFDVIDTMKAAVEKACPKTVSCADLLAIAAQKSVVL 135          
BLAST of CN184587 vs. ExPASy Swiss-Prot
Match: PERN_ARMRU (Peroxidase N OS=Armoracia rusticana GN=HRPN PE=2 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 3.150e-36
Identity = 76/116 (65.52%), Postives = 89/116 (76.72%), Query Frame = -3
Query:  125 SPSQAQLSPSFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVAL 472
            S  +AQLSP  Y+ +CPN+L  + D +K A  ++IR+ ASLIRLHFHDCFV+GCDAS+LLD TN   SEK A PN NS RGFEVID +KAAVE ACP VVSCADILT+AA  SV L
Sbjct:   24 SAVRAQLSPDIYAKSCPNLLQIVRDQVKIALKAEIRMAASLIRLHFHDCFVNGCDASVLLDGTN---SEKLAIPNVNSVRGFEVIDTIKAAVENACPGVVSCADILTLAARDSVYL 136          
BLAST of CN184587 vs. ExPASy Swiss-Prot
Match: PER52_ARATH (Peroxidase 52 OS=Arabidopsis thaliana GN=PER52 PE=2 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 3.150e-36
Identity = 70/111 (63.06%), Postives = 92/111 (82.88%), Query Frame = -3
Query:  131 QAQLSPSFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSV 463
            +AQL+ +FYS++CPN+L+T++  +K A +S+ R+GAS++RL FHDCFV+GCD SILLD T++   E+ AAPN NSARGF VIDN+K+AVE+ACP VVSCADIL IAA  SV
Sbjct:   27 EAQLTTNFYSTSCPNLLSTVQTAVKSAVNSEARMGASILRLFFHDCFVNGCDGSILLDDTSSFTGEQNAAPNRNSARGFNVIDNIKSAVEKACPGVVSCADILAIAARDSV 137          
BLAST of CN184587 vs. ExPASy Swiss-Prot
Match: PER3_ARMRU (Peroxidase C3 OS=Armoracia rusticana GN=PRXC3 PE=3 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 3.150e-36
Identity = 74/118 (62.71%), Postives = 89/118 (75.42%), Query Frame = -3
Query:  125 EGSPSQAQLSPSFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVAL 478
            + S S AQL P FY  TCP+V N I D++     +D RI ASL+RLHFHDCFV GCDASILLD++ +  +EK AAPN NSARGF VID MK ++ERACPR VSCAD+LTIA++ SV L
Sbjct:   23 QASNSNAQLRPDFYFRTCPSVFNIIGDIIVDELRTDPRIAASLLRLHFHDCFVRGCDASILLDNSTSFRTEKDAAPNANSARGFGVIDRMKTSLERACPRTVSCADVLTIASQISVLL 140          
BLAST of CN184587 vs. ExPASy Swiss-Prot
Match: PERE5_ARMRU (Peroxidase E5 OS=Armoracia rusticana GN=HRPE5 PE=1 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 7.017e-36
Identity = 73/111 (65.77%), Postives = 87/111 (78.38%), Query Frame = -3
Query:  125 QLSPSFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVAL 457
            QL P FYS TCP+V N I++V+     +D RI AS++RLHFHDCFV GCDASILLD++ +  +EK AAPN NSARGF VID MK A+ERACPR VSCADILTIA++ SV L
Sbjct:    1 QLRPDFYSRTCPSVFNIIKNVIVDELQTDPRIAASILRLHFHDCFVRGCDASILLDTSKSFRTEKDAAPNVNSARGFNVIDRMKTALERACPRTVSCADILTIASQISVLL 111          
BLAST of CN184587 vs. ExPASy Swiss-Prot
Match: PER37_ARATH (Peroxidase 37 OS=Arabidopsis thaliana GN=PER37 PE=2 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 7.017e-36
Identity = 74/116 (63.79%), Postives = 87/116 (75.00%), Query Frame = -3
Query:  125 SPSQAQLSPSFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVAL 472
            S S AQLSPSFY  TCP V +     +  A  SD RI AS++RLHFHDCFV+GCDASILLD+T +  +EK A  N NSARGF+VID MKAAVE+ACP+ VSCAD+L IAA+ SV L
Sbjct:   18 SLSHAQLSPSFYDKTCPQVFDIATTTIVNALRSDPRIAASILRLHFHDCFVNGCDASILLDNTTSFRTEKDAFGNANSARGFDVIDKMKAAVEKACPKTVSCADLLAIAAQESVVL 133          
BLAST of CN184587 vs. ExPASy Swiss-Prot
Match: PERX_NICSY (Lignin-forming anionic peroxidase OS=Nicotiana sylvestris PE=2 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 1.013e-34
Identity = 72/113 (63.72%), Postives = 87/113 (76.99%), Query Frame = -3
Query:  122 AQLSPSFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALV 460
            AQLS +FY +TCPN LNTI   +++A SS+ R+ ASLIRLHFHDCFV GCDASILLD T +I+SEK A PN  SARGF +I++ K  VE+ CP VVSCADILT+AA  + A V
Sbjct:   27 AQLSATFYDNTCPNALNTIRTSVRQAISSERRMAASLIRLHFHDCFVQGCDASILLDETPSIESEKTALPNLGSARGFGIIEDAKREVEKICPGVVSCADILTVAARDASAAV 139          
BLAST of CN184587 vs. ExPASy Swiss-Prot
Match: PER54_ARATH (Peroxidase 54 OS=Arabidopsis thaliana GN=PER54 PE=2 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 2.257e-34
Identity = 67/114 (58.77%), Postives = 86/114 (75.44%), Query Frame = -3
Query:  125 SQAQLSPSFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVAL 466
            S AQL+ +FYS TCPN    +   +++A  SD RIG SLIRLHFHDCFV+GCD S+LLD T++I SEK A  N NS RGF V+D++K A+E ACP +VSC+DIL +A+E SV+L
Sbjct:   29 SSAQLNATFYSGTCPNASAIVRSTIQQALQSDARIGGSLIRLHFHDCFVNGCDGSLLLDDTSSIQSEKNAPANANSTRGFNVVDSIKTALENACPGIVSCSDILALASEASVSL 142          
BLAST of CN184587 vs. ExPASy Swiss-Prot
Match: PER22_ARATH (Peroxidase 22 OS=Arabidopsis thaliana GN=PER22 PE=1 SV=2)

HSP 1 Score: 144.821 bits (364), Expect = 2.257e-34
Identity = 73/118 (61.86%), Postives = 87/118 (73.73%), Query Frame = -3
Query:  125 EGSPSQAQLSPSFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVAL 478
            + S S AQL P FY  TCP V + I +++     +D RI ASL+RLHFHDCFV GCDASILLD++ +  +EK AAPN NSARGF VID MK A+ERACP  VSCADILTIA++ SV L
Sbjct:   23 QASNSNAQLRPDFYFGTCPFVFDIIGNIIVDELQTDPRIAASLLRLHFHDCFVRGCDASILLDNSTSFRTEKDAAPNANSARGFNVIDRMKVALERACPGRVSCADILTIASQISVLL 140          
The following BLAST results are available for this feature:
BLAST of CN184587 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 108
Match NameE-valueIdentityDescription
PER15_IPOBA1.847e-3664.10Peroxidase 15 OS=Ipomoea batatas GN=pod PE=1 SV=1[more]
PER2_ARMRU2.412e-3663.79Peroxidase C2 OS=Armoracia rusticana GN=PRXC2 PE=3... [more]
PERN_ARMRU3.150e-3665.52Peroxidase N OS=Armoracia rusticana GN=HRPN PE=2 S... [more]
PER52_ARATH3.150e-3663.06Peroxidase 52 OS=Arabidopsis thaliana GN=PER52 PE=... [more]
PER3_ARMRU3.150e-3662.71Peroxidase C3 OS=Armoracia rusticana GN=PRXC3 PE=3... [more]
PERE5_ARMRU7.017e-3665.77Peroxidase E5 OS=Armoracia rusticana GN=HRPE5 PE=1... [more]
PER37_ARATH7.017e-3663.79Peroxidase 37 OS=Arabidopsis thaliana GN=PER37 PE=... [more]
PERX_NICSY1.013e-3463.72Lignin-forming anionic peroxidase OS=Nicotiana syl... [more]
PER54_ARATH2.257e-3458.77Peroxidase 54 OS=Arabidopsis thaliana GN=PER54 PE=... [more]
PER22_ARATH2.257e-3461.86Peroxidase 22 OS=Arabidopsis thaliana GN=PER22 PE=... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS04_0005L24_f Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0005L24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184587 ID=CN184587; Name=CN184587; organism=Citrus sinensis; type=EST; length=522bp
AAAATTACATTAATACTGCAAAGGTTTACCATTATTCTCTTAACTTATTC
TGATACCCATATTAATTTACTTCTAAGCGTAAAATATTAACCAGGAAGAG
GAGTTGGTAATAGAAATTCATTACCAAAGCAACGGATCGTTCAGCCGCAA
TAGTAAGAATATCAGCGCAGGAAACAACCCTTGGACATGCCCTTTCAACG
GCAGCTTTCATGTTATCAATAACTTCAAAACCCCTCGCCGAATTGTTATT
TGGCGCAGCAAATTTCTCGCTGTCTATGGTGTTAGTGCTGTCCAGCAAAA
TCGATGCATCACACCCATCAACAAAACAGTCATGGAAATGAAGCCTGATG
AGGCTGGCACCGATCCGGATATCGGACGAGAAAGCTTTCTTAAGCACATC
CTCGATAGTGTTCAATACATTAGGGCATGTGGAAGAATAAAAAGATGGAG
AAAGTTGAGCTTGAGATGGTGATCCCTCAAGCACAAAAGCAACAAGAAGA
GCTGCTGCGAGAAGATAACCCT
back to top