CN184587

Overview
NameCN184587
Unique NameCN184587
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length522
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN184587 vs. ExPASy Swiss-Prot
Match: PER73_ARATH (Peroxidase 73 OS=Arabidopsis thaliana GN=PER73 PE=1 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 1.797e-15
Identity = 44/108 (40.74%), Postives = 66/108 (61.11%), Query Frame = -3
Query:  146 AQLSPSFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSA-RGFEVIDNMKAAVER--ACPRVVSCADILTIA 460
            AQL  +FY ++CPNV   ++ V+++          + +RL FHDCFV+GCDAS+++ ST T  +EK    N + A  GF+V+   K A++   +C   VSCADIL +A
Sbjct:   25 AQLKTNFYGNSCPNVEQIVKKVVQEKIKQTFVTIPATLRLFFHDCFVNGCDASVMIQSTPTNKAEKDHPDNISLAGDGFDVVIKAKKALDAIPSCKNKVSCADILALA 132          
BLAST of CN184587 vs. ExPASy Swiss-Prot
Match: PER42_ARATH (Peroxidase 42 OS=Arabidopsis thaliana GN=PER42 PE=1 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 2.347e-15
Identity = 45/118 (38.14%), Postives = 62/118 (52.54%), Query Frame = -3
Query:  101 LSPSFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALVMNFYYQL 454
            L  +FY  TCP   + + + +K  +        S +R  FHDC V+ CDAS+LLDST     EK     +   R F  I+ +K A+ER CP VVSC+DIL ++A   +  V   Y  L
Sbjct:   31 LMMNFYKDTCPQAEDIVREQVKLLYKRHKNTAFSWLRNIFHDCAVESCDASLLLDSTRRELGEK-EHDRSFGLRNFRYIEEIKEALERECPGVVSCSDILVLSAREGIEAVGGPYIPL 147          
BLAST of CN184587 vs. ExPASy Swiss-Prot
Match: PER41_ARATH (Peroxidase 41 OS=Arabidopsis thaliana GN=PER41 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 2.347e-15
Identity = 42/120 (35.00%), Postives = 67/120 (55.83%), Query Frame = -3
Query:  101 LSPSFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARG--FEVIDNMKAAVERACPRVVSCADILTIAAERSVALVMNFYYQL 454
            L+  +Y  TCP+    + + +           A  +RL FHDCF++GCDAS+L+ +TN+ +  +     N S  G  F+++  +K A+E +CP VVSCADIL  A    V +V   +Y++
Sbjct:   26 LTKDYYQKTCPDFNKIVRETVTPKQGQQPTTAAGTLRLFFHDCFMEGCDASVLI-ATNSFNKAERDDDLNESLPGDAFDIVTRIKTALELSCPGVVSCADILAQATRDLVTMVGGPFYEV 144          
BLAST of CN184587 vs. ExPASy Swiss-Prot
Match: PER65_ARATH (Peroxidase 65 OS=Arabidopsis thaliana GN=PER65 PE=2 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 5.228e-15
Identity = 44/126 (34.92%), Postives = 68/126 (53.97%), Query Frame = -3
Query:  101 SPSQAQLSPSFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARG--FEVIDNMKAAVERACPRVVSCADILTIAAERSVALVMNFYYQL 472
            S   A L   +Y  TCP+    + + +           A  +RL FHDCF++GCDAS+L+ +TN+ +  +     N+S  G  F+++  +K A+E +CP VVSCADIL  A    V +V   Y+ +
Sbjct:   27 SADVAILRTDYYQKTCPDFHKIVREAVTTKQVQQPTTAAGTLRLFFHDCFLEGCDASVLI-ATNSFNKAERDDDLNDSLPGDAFDIVTRIKTALELSCPGVVSCADILAQATRDLVTMVGGPYFDV 151          
BLAST of CN184587 vs. ExPASy Swiss-Prot
Match: PER61_ARATH (Probable peroxidase 61 OS=Arabidopsis thaliana GN=PER61 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.165e-14
Identity = 43/102 (42.16%), Postives = 59/102 (57.84%), Query Frame = -3
Query:  131 SSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSV 436
            ++TC +    I   ++K + +D  I   L+RL + DC V+GCD SILL   N   SE+  AP N    GF +ID +K  +E  CP VVSCADIL +A   +V
Sbjct:   43 TNTCDDAETYIRYQVEKFYKNDSSIAPKLLRLLYSDCMVNGCDGSILLQGPN---SER-TAPQNRGLGGFVIIDKIKQVLESRCPGVVSCADILNLATRDAV 140          
BLAST of CN184587 vs. ExPASy Swiss-Prot
Match: PER16_ARATH (Peroxidase 16 OS=Arabidopsis thaliana GN=PER16 PE=1 SV=2)

HSP 1 Score: 78.9518 bits (193), Expect = 1.521e-14
Identity = 46/116 (39.66%), Postives = 63/116 (54.31%), Query Frame = -3
Query:  125 AQLSPSFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNS--ARGFEVIDNMKAAVER--ACPRVVSCADILTIAAERSVAL 460
            AQL  +FY  +CPNV   + + +++ F        + +RL FHDCFV GCDASILL S +  D      P++ S    GF+ +   K A++R   C   VSCADIL +A    V L
Sbjct:   23 AQLQTNFYRKSCPNVETIVRNAVRQKFQQTFVTAPATLRLFFHDCFVRGCDASILLASPSEKDH-----PDDKSLAGDGFDTVAKAKQALDRDPNCRNKVSCADILALATRDVVVL 133          
BLAST of CN184587 vs. ExPASy Swiss-Prot
Match: PER45_ARATH (Peroxidase 45 OS=Arabidopsis thaliana GN=PER45 PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.288e-13
Identity = 44/116 (37.93%), Postives = 62/116 (53.45%), Query Frame = -3
Query:  125 AQLSPSFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNS--ARGFEVIDNMKAAVER--ACPRVVSCADILTIAAERSVAL 460
            AQL   FY ++CPNV   + + +++ F        + +RL FHDCFV GCDASI++ S +  D      P++ S    GF+ +   K AV+    C   VSCADIL +A    V L
Sbjct:   25 AQLRTGFYQNSCPNVETIVRNAVRQKFQQTFVTAPATLRLFFHDCFVRGCDASIMIASPSERDH-----PDDMSLAGDGFDTVVKAKQAVDSNPNCRNKVSCADILALATREVVVL 135          
BLAST of CN184587 vs. ExPASy Swiss-Prot
Match: PER21_ARATH (Peroxidase 21 OS=Arabidopsis thaliana GN=PER21 PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.860e-12
Identity = 34/112 (30.36%), Postives = 61/112 (54.46%), Query Frame = -3
Query:  122 QLSPSFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALV 457
            +L  ++Y  +CP     I   ++  +        S +R  FHDC V  CDAS+LL++   ++SE+  +  +   R F+ +  +K A+E+ CP  VSCADI+ ++A   + ++
Sbjct:   29 ELEMNYYKESCPKAEEIIRQQVETLYYKHGNTAVSWLRNLFHDCVVKSCDASLLLETARGVESEQ-KSKRSFGMRNFKYVKIIKDALEKECPSTVSCADIVALSARDGIVML 139          
The following BLAST results are available for this feature:
BLAST of CN184587 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 108
Match NameE-valueIdentityDescription
PER73_ARATH1.797e-1540.74Peroxidase 73 OS=Arabidopsis thaliana GN=PER73 PE=... [more]
PER42_ARATH2.347e-1538.14Peroxidase 42 OS=Arabidopsis thaliana GN=PER42 PE=... [more]
PER41_ARATH2.347e-1535.00Peroxidase 41 OS=Arabidopsis thaliana GN=PER41 PE=... [more]
PER65_ARATH5.228e-1534.92Peroxidase 65 OS=Arabidopsis thaliana GN=PER65 PE=... [more]
PER61_ARATH1.165e-1442.16Probable peroxidase 61 OS=Arabidopsis thaliana GN=... [more]
PER16_ARATH1.521e-1439.66Peroxidase 16 OS=Arabidopsis thaliana GN=PER16 PE=... [more]
PER45_ARATH1.288e-1337.93Peroxidase 45 OS=Arabidopsis thaliana GN=PER45 PE=... [more]
PER21_ARATH1.860e-1230.36Peroxidase 21 OS=Arabidopsis thaliana GN=PER21 PE=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0005L24_f Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0005L24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184587 ID=CN184587; Name=CN184587; organism=Citrus sinensis; type=EST; length=522bp
AAAATTACATTAATACTGCAAAGGTTTACCATTATTCTCTTAACTTATTC
TGATACCCATATTAATTTACTTCTAAGCGTAAAATATTAACCAGGAAGAG
GAGTTGGTAATAGAAATTCATTACCAAAGCAACGGATCGTTCAGCCGCAA
TAGTAAGAATATCAGCGCAGGAAACAACCCTTGGACATGCCCTTTCAACG
GCAGCTTTCATGTTATCAATAACTTCAAAACCCCTCGCCGAATTGTTATT
TGGCGCAGCAAATTTCTCGCTGTCTATGGTGTTAGTGCTGTCCAGCAAAA
TCGATGCATCACACCCATCAACAAAACAGTCATGGAAATGAAGCCTGATG
AGGCTGGCACCGATCCGGATATCGGACGAGAAAGCTTTCTTAAGCACATC
CTCGATAGTGTTCAATACATTAGGGCATGTGGAAGAATAAAAAGATGGAG
AAAGTTGAGCTTGAGATGGTGATCCCTCAAGCACAAAAGCAACAAGAAGA
GCTGCTGCGAGAAGATAACCCT
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