CN184587

Overview
NameCN184587
Unique NameCN184587
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length522
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN184587 vs. ExPASy Swiss-Prot
Match: PER2_SOLLC (Suberization-associated anionic peroxidase 2 OS=Solanum lycopersicum GN=TAP2 PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 6.162e-24
Identity = 60/115 (52.17%), Postives = 74/115 (64.35%), Query Frame = -3
Query:  128 SQAQLSPSFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTN-TIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRV-VSCADILTIAAERSVA 466
            S   LS      +C  V + ++ V+  A  ++ R+GASLIRLHFHDCFVDGCD  ILLD  N T   E+ + PNNNS RGFEVI   K +V  +CP + VSCADIL IAA  S+A
Sbjct:   67 SDKYLSQQLTQESC--VFSAVKGVVDSAIDNETRMGASLIRLHFHDCFVDGCDGGILLDDINGTFTGEQNSPPNNNSVRGFEVIAQAKQSVVDSCPNISVSCADILAIAARDSLA 179          
BLAST of CN184587 vs. ExPASy Swiss-Prot
Match: PER1_ORYSJ (Peroxidase 1 OS=Oryza sativa subsp. japonica GN=PRX74 PE=2 SV=2)

HSP 1 Score: 109.383 bits (272), Expect = 1.051e-23
Identity = 53/114 (46.49%), Postives = 73/114 (64.04%), Query Frame = -3
Query:  125 SQAQLSPSFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVAL 466
            S AQL   FYS++CP+V   +   + +A  +   +   L+R+HFHDCFV GCD S+LLDS     +EK A P N + RGF  ++ +KAAVE+ACP  VSCAD+L + A  +V L
Sbjct:   20 SSAQLDEKFYSNSCPSVEAVVRKEMVRALGAAPSLAGPLLRMHFHDCFVRGCDGSVLLDSAGNSTAEKDATP-NQTLRGFGFVERVKAAVEKACPGTVSCADVLALMARDAVWL 132          
BLAST of CN184587 vs. ExPASy Swiss-Prot
Match: PER66_ARATH (Peroxidase 66 OS=Arabidopsis thaliana GN=PER66 PE=2 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 1.373e-23
Identity = 56/124 (45.16%), Postives = 77/124 (62.10%), Query Frame = -3
Query:   98 PSQAQLSPSFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALVMNFYYQLL 469
            PS+A L   +Y  +CP     I + ++ A   D ++ A L+R+ FHDCF+ GCDASILLDST +  +EK   P N S R F VI++ K  +E+ACPR VSCAD++ IAA   V L    Y+ +L
Sbjct:   21 PSEAALDAHYYDQSCPAAEKIILETVRNATLYDPKVPARLLRMFFHDCFIRGCDASILLDSTRSNQAEK-DGPPNISVRSFYVIEDAKRKLEKACPRTVSCADVIAIAARDVVTLSGGPYWSVL 143          
BLAST of CN184587 vs. ExPASy Swiss-Prot
Match: PER5_VITVI (Peroxidase 5 OS=Vitis vinifera GN=GSVIVT00037159001 PE=1 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 3.994e-23
Identity = 53/118 (44.92%), Postives = 72/118 (61.02%), Query Frame = -3
Query:  101 LSPSFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALVMNFYYQL 454
            L   FY ++C      ++D ++K F  D  +   L+R+HFHDCFV GCD S+L+DST +  +EK +  NN S RGFEVID+ KA +E  C  VVSCADI+  AA  SV +     Y +
Sbjct:   61 LQVGFYRTSCGLAEFIVKDEVRKGFIRDSGVAPGLVRMHFHDCFVRGCDGSVLIDSTPSNTAEKDSPANNPSLRGFEVIDSAKARLEAVCKGVVSCADIVAFAARDSVEITGGLGYDV 178          
BLAST of CN184587 vs. ExPASy Swiss-Prot
Match: PER2_MAIZE (Peroxidase 2 OS=Zea mays GN=PER2 PE=2 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 3.994e-23
Identity = 55/105 (52.38%), Postives = 72/105 (68.57%), Query Frame = -3
Query:  143 LSPSFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDS-EKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAA 454
            L   +Y  TCP     ++  ++KA + +   GA++IR+ FHDCFV+GCDAS+LLD T    + EK AAPNN S RGFE+ID +K A+E ACP VVSCADI+  AA
Sbjct:   35 LELGYYRYTCPQAEAIVKASMEKAIAQNPGNGAAVIRMLFHDCFVEGCDASVLLDPTPFSPTPEKLAAPNNPSLRGFELIDAIKDALEAACPGVVSCADIIAFAA 139          
BLAST of CN184587 vs. ExPASy Swiss-Prot
Match: PER47_ARATH (Peroxidase 47 OS=Arabidopsis thaliana GN=PER47 PE=2 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 6.812e-23
Identity = 56/126 (44.44%), Postives = 79/126 (62.70%), Query Frame = -3
Query:  101 GSPSQAQ-LSPSFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALVMNFYYQL 475
            G P  A+ LS ++Y  +CP     +++ +  A  +D  + A LIR+ FHDCF++GCDASILLDST    +EK  +P N S RG+E+ID+ K  +E  CP VVSCADI+ +AA  +V      YY +
Sbjct:   18 GFPFHARGLSMTYYMMSCPFAEQIVKNSVNNALQADPTLAAGLIRMLFHDCFIEGCDASILLDSTKDNTAEK-DSPANLSLRGYEIIDDAKEKIENRCPGVVSCADIVAMAARDAVFWAGGPYYDI 142          
BLAST of CN184587 vs. ExPASy Swiss-Prot
Match: PER1_SOLLC (Suberization-associated anionic peroxidase 1 OS=Solanum lycopersicum GN=TAP1 PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 6.812e-23
Identity = 57/99 (57.58%), Postives = 67/99 (67.68%), Query Frame = -3
Query:  128 VLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTN-TIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRV-VSCADILTIAAERSVA 418
            V + +  V+  A  ++ R+GASLIRLHFHDCFVDGCD  ILLD  N T   E+ + PN NSARG+EVI   K +V   CP V VSCADIL IAA  SVA
Sbjct:   82 VFSAVRAVVDSAIDAETRMGASLIRLHFHDCFVDGCDGGILLDDINGTFTGEQNSPPNANSARGYEVIAQAKQSVINTCPNVSVSCADILAIAARDSVA 180          
BLAST of CN184587 vs. ExPASy Swiss-Prot
Match: PERX_SOLTU (Suberization-associated anionic peroxidase OS=Solanum tuberosum PE=2 SV=2)

HSP 1 Score: 105.916 bits (263), Expect = 1.162e-22
Identity = 56/99 (56.57%), Postives = 67/99 (67.68%), Query Frame = -3
Query:  128 VLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTN-TIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRV-VSCADILTIAAERSVA 418
            V + +  V+  A  ++ R+GASLIRLHFHDCFVDGCD  ILLD  N T   E+ + PN NSARG+EVI   K +V   CP + VSCADIL IAA  SVA
Sbjct:   81 VFSAVRGVVDSAIDAETRMGASLIRLHFHDCFVDGCDGGILLDDINGTFTGEQNSPPNANSARGYEVIAQAKQSVIDTCPNISVSCADILAIAARDSVA 179          
BLAST of CN184587 vs. ExPASy Swiss-Prot
Match: PER3_ARATH (Peroxidase 3 OS=Arabidopsis thaliana GN=PER3 PE=1 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 1.162e-22
Identity = 51/113 (45.13%), Postives = 78/113 (69.03%), Query Frame = -3
Query:  131 PSQAQLSPSFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSV 469
            P QAQL  +FY+++CPN    ++D +    S+   + A+LIR+HFHDCFV GCD S+L++ST+  ++E+ A P N + RGF  ID +K+ +E  CP +VSCADI+ +A+  +V
Sbjct:   21 PIQAQLQMNFYANSCPNAEKIVQDFVSNHVSNAPSLAAALIRMHFHDCFVRGCDGSVLINSTSG-NAERDATP-NLTVRGFGFIDAIKSVLEAQCPGIVSCADIIALASRDAV 131          
BLAST of CN184587 vs. ExPASy Swiss-Prot
Match: PERN1_TOBAC (Peroxidase N1 OS=Nicotiana tabacum GN=poxN1 PE=1 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 1.518e-22
Identity = 50/104 (48.08%), Postives = 70/104 (67.31%), Query Frame = -3
Query:  131 FYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSV 442
            FYSSTCP   + ++  ++  F SD  +   ++R+HFHDCFV GCD SIL++ +   D+E+ A PN N  +GF+VI++ K  +E  CP VVSCADIL +AA  SV
Sbjct:   36 FYSSTCPRAESIVQSTVRAHFQSDPTVAPGILRMHFHDCFVLGCDGSILIEGS---DAERTAIPNRN-LKGFDVIEDAKTQIEAICPGVVSCADILALAARDSV 135          
The following BLAST results are available for this feature:
BLAST of CN184587 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 108
Match NameE-valueIdentityDescription
PER2_SOLLC6.162e-2452.17Suberization-associated anionic peroxidase 2 OS=So... [more]
PER1_ORYSJ1.051e-2346.49Peroxidase 1 OS=Oryza sativa subsp. japonica GN=PR... [more]
PER66_ARATH1.373e-2345.16Peroxidase 66 OS=Arabidopsis thaliana GN=PER66 PE=... [more]
PER5_VITVI3.994e-2344.92Peroxidase 5 OS=Vitis vinifera GN=GSVIVT0003715900... [more]
PER2_MAIZE3.994e-2352.38Peroxidase 2 OS=Zea mays GN=PER2 PE=2 SV=1[more]
PER47_ARATH6.812e-2344.44Peroxidase 47 OS=Arabidopsis thaliana GN=PER47 PE=... [more]
PER1_SOLLC6.812e-2357.58Suberization-associated anionic peroxidase 1 OS=So... [more]
PERX_SOLTU1.162e-2256.57Suberization-associated anionic peroxidase OS=Sola... [more]
PER3_ARATH1.162e-2245.13Peroxidase 3 OS=Arabidopsis thaliana GN=PER3 PE=1 ... [more]
PERN1_TOBAC1.518e-2248.08Peroxidase N1 OS=Nicotiana tabacum GN=poxN1 PE=1 S... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0005L24_f Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0005L24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184587 ID=CN184587; Name=CN184587; organism=Citrus sinensis; type=EST; length=522bp
AAAATTACATTAATACTGCAAAGGTTTACCATTATTCTCTTAACTTATTC
TGATACCCATATTAATTTACTTCTAAGCGTAAAATATTAACCAGGAAGAG
GAGTTGGTAATAGAAATTCATTACCAAAGCAACGGATCGTTCAGCCGCAA
TAGTAAGAATATCAGCGCAGGAAACAACCCTTGGACATGCCCTTTCAACG
GCAGCTTTCATGTTATCAATAACTTCAAAACCCCTCGCCGAATTGTTATT
TGGCGCAGCAAATTTCTCGCTGTCTATGGTGTTAGTGCTGTCCAGCAAAA
TCGATGCATCACACCCATCAACAAAACAGTCATGGAAATGAAGCCTGATG
AGGCTGGCACCGATCCGGATATCGGACGAGAAAGCTTTCTTAAGCACATC
CTCGATAGTGTTCAATACATTAGGGCATGTGGAAGAATAAAAAGATGGAG
AAAGTTGAGCTTGAGATGGTGATCCCTCAAGCACAAAAGCAACAAGAAGA
GCTGCTGCGAGAAGATAACCCT
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