CN184587

Overview
NameCN184587
Unique NameCN184587
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length522
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN184587 vs. ExPASy Swiss-Prot
Match: PER25_ARATH (Peroxidase 25 OS=Arabidopsis thaliana GN=PER25 PE=2 SV=2)

HSP 1 Score: 100.523 bits (249), Expect = 4.882e-21
Identity = 52/110 (47.27%), Postives = 68/110 (61.82%), Query Frame = -3
Query:  125 LSPSFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVAL 454
            L   +YS++CP   + +   ++  F SD  I   L+RLHFHDCFV GCD S+L+   +   +E+ A P N   RG EVID+ KA +E  CP VVSCADIL +AA  SV L
Sbjct:   29 LKNGYYSTSCPKAESIVRSTVESHFDSDPTISPGLLRLHFHDCFVQGCDGSVLIKGKS---AEQAALP-NLGLRGLEVIDDAKARLEAVCPGVVSCADILALAARDSVDL 134          
BLAST of CN184587 vs. ExPASy Swiss-Prot
Match: PER24_ARATH (Peroxidase 24 OS=Arabidopsis thaliana GN=PER24 PE=2 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 4.882e-21
Identity = 50/113 (44.25%), Postives = 73/113 (64.60%), Query Frame = -3
Query:  128 QAQLSPSFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDS-TNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVA 463
            + +L  +FY ++CP   + +  ++ K   ++  +   L+R+H+HDCFV GCDAS+LLDS      SEK A P N S  GFE+ID +K  +E+ CP  VSCADILT+AA  +V+
Sbjct:   43 EGKLKMNFYHNSCPGAEDIVRQIVWKKVEANRSLAPKLLRVHYHDCFVRGCDASLLLDSVAGKAVSEKEARP-NLSLSGFEIIDEIKYILEKRCPNTVSCADILTLAARDAVS 154          
BLAST of CN184587 vs. ExPASy Swiss-Prot
Match: PER48_ARATH (Putative Peroxidase 48 OS=Arabidopsis thaliana GN=PER48 PE=2 SV=3)

HSP 1 Score: 100.138 bits (248), Expect = 6.376e-21
Identity = 49/121 (40.50%), Postives = 74/121 (61.16%), Query Frame = -3
Query:  101 QAQLSPSFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALVMNFYYQL 463
            ++ L   +Y  +CP     I   ++  ++    +   +IRL FHDCF++GCDAS+LLD+     SEK A+P N S +GF+VID +K+ +E  CP VVSCAD+L +AA  +V +    +Y L
Sbjct:   65 RSYLHYDYYRESCPTAEKIIAKAIRDIYNVTPSVAPPIIRLLFHDCFIEGCDASVLLDADEAHTSEKDASP-NLSLKGFDVIDAVKSELENVCPGVVSCADLLVLAAREAVLVAGGPFYPL 184          
BLAST of CN184587 vs. ExPASy Swiss-Prot
Match: PER46_ARATH (Peroxidase 46 OS=Arabidopsis thaliana GN=PER46 PE=2 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.088e-20
Identity = 52/112 (46.43%), Postives = 68/112 (60.71%), Query Frame = -3
Query:  131 SQAQLSPSFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSV 466
            S A LS +FY+S+C      + + ++ A SSD  I   L+RL FHDCFV GCDAS+L+   +T  S+    P N S  GF VID  K A+E  CP  VSCADI+ +AA  +V
Sbjct:   25 SSANLSFNFYASSCSVAEFLVRNTVRSATSSDPTIPGKLLRLFFHDCFVQGCDASVLIQGNSTEKSD----PGNASLGGFSVIDTAKNAIENLCPATVSCADIVALAARDAV 132          
BLAST of CN184587 vs. ExPASy Swiss-Prot
Match: PERN_IPOBA (Neutral peroxidase OS=Ipomoea batatas PE=1 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 2.423e-20
Identity = 49/107 (45.79%), Postives = 66/107 (61.68%), Query Frame = -3
Query:  101 VLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRV-VSCADILTIAAERSVALVMNFYYQL 418
            V + +++++  A +++ R+GASLIRLHFHDCFVDGCD  ILL+ T     E+ A  N+NS RGF VID  K   +  C    VSCAD+L IAA  +     N  Y +
Sbjct:   72 VFSAVKEIVDAAITAETRMGASLIRLHFHDCFVDGCDGGILLNDTANFTGEQGAPANSNSVRGFSVIDQAKRNAQTKCADTPVSCADVLAIAARDAFRKFTNQTYNI 178          
BLAST of CN184587 vs. ExPASy Swiss-Prot
Match: PER1_ARATH (Peroxidase 1/2 OS=Arabidopsis thaliana GN=PER1 PE=1 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 4.133e-20
Identity = 47/111 (42.34%), Postives = 68/111 (61.26%), Query Frame = -3
Query:  122 LSPSFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALV 454
            L   +Y S CP     +  V  +  S    + A L+R+HFHDCFV GCD S+LL S    D+E+ A P N + +G+EV+D  K A+ER CP ++SCAD+L + A  +VA++
Sbjct:   26 LDLDYYRSKCPKAEEIVRGVTVQYVSRQKTLAAKLLRMHFHDCFVRGCDGSVLLKSAKN-DAERDAVP-NLTLKGYEVVDAAKTALERKCPNLISCADVLALVARDAVAVI 134          
BLAST of CN184587 vs. ExPASy Swiss-Prot
Match: PER56_ARATH (Peroxidase 56 OS=Arabidopsis thaliana GN=PER56 PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 1.203e-19
Identity = 51/120 (42.50%), Postives = 75/120 (62.50%), Query Frame = -3
Query:  116 SPSQAQ-LSPSFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALVMN 472
            +P+  Q L   FY   CP     ++  + +A  +D  I A L+R+ FHDCFV GC+ S+LL+  N  D EK + P N + RGFE+IDN+KAA+E+ CP +VSC+D+L + A R   + +N
Sbjct:   25 APTNVQGLKVGFYDKACPKAELIVKKSVFEAVKNDRTIAAPLLRMFFHDCFVRGCEGSVLLELKNKKD-EKNSIP-NLTLRGFEIIDNVKAALEKECPGIVSCSDVLALVA-RDAMVALN 141          
BLAST of CN184587 vs. ExPASy Swiss-Prot
Match: PER31_ARATH (Peroxidase 31 OS=Arabidopsis thaliana GN=PER31 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 1.571e-19
Identity = 49/123 (39.84%), Postives = 76/123 (61.79%), Query Frame = -3
Query:  101 SQAQLSPSFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPN-NNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALVMNFYYQL 466
            +Q++L+ +FYS TCP  L+ I D +     ++    A++IRL FHDCF +GCDAS+L+ ST    +E+ ++ N +    GF+VI   K A+E ACP  VSC+DI+++A    +  V   YY +
Sbjct:   17 AQSRLTTNFYSKTCPRFLDIIRDTITNKQITNPTTAAAVIRLFFHDCFPNGCDASVLISSTAFNTAERDSSINLSLPGDGFDVIVRAKTALELACPNTVSCSDIISVATRDLLITVGGPYYDV 139          
BLAST of CN184587 vs. ExPASy Swiss-Prot
Match: PER70_ARATH (Peroxidase 70 OS=Arabidopsis thaliana GN=PER70 PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 3.499e-19
Identity = 50/106 (47.17%), Postives = 66/106 (62.26%), Query Frame = -3
Query:  125 FYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVAL 442
            +Y S C NV + +  V++  + ++      ++R+HFHDCFV GCDAS+LL   N   SE+ A P N S RGF VI+  K  +E ACPR VSCADIL +AA   V L
Sbjct:   38 YYGSACWNVESIVRSVVESNYLANPANAPGILRMHFHDCFVQGCDASVLLAGPN---SERTAIP-NLSLRGFNVIEEAKTQLEIACPRTVSCADILALAARDFVHL 139          
BLAST of CN184587 vs. ExPASy Swiss-Prot
Match: PER18_ARATH (Peroxidase 18 OS=Arabidopsis thaliana GN=PER18 PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 4.570e-19
Identity = 50/114 (43.86%), Postives = 69/114 (60.53%), Query Frame = -3
Query:  131 SPSQAQLSPSFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSV 472
            S S A+LS +FY+ +CP     + + ++ A SSD  +   L+RL FHDCFV GCD S+L+    T  S+    P N S  GF VI+++K  +E  CP  VSCADIL +AA  +V
Sbjct:   25 SSSVAELSFNFYAGSCPGAELIVRNTVRSASSSDPSVLGKLLRLIFHDCFVQGCDGSVLIRGNGTERSD----PGNASLGGFAVIESVKNILEIFCPGTVSCADILVLAARDAV 134          
The following BLAST results are available for this feature:
BLAST of CN184587 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 108
Match NameE-valueIdentityDescription
PER25_ARATH4.882e-2147.27Peroxidase 25 OS=Arabidopsis thaliana GN=PER25 PE=... [more]
PER24_ARATH4.882e-2144.25Peroxidase 24 OS=Arabidopsis thaliana GN=PER24 PE=... [more]
PER48_ARATH6.376e-2140.50Putative Peroxidase 48 OS=Arabidopsis thaliana GN=... [more]
PER46_ARATH1.088e-2046.43Peroxidase 46 OS=Arabidopsis thaliana GN=PER46 PE=... [more]
PERN_IPOBA2.423e-2045.79Neutral peroxidase OS=Ipomoea batatas PE=1 SV=1[more]
PER1_ARATH4.133e-2042.34Peroxidase 1/2 OS=Arabidopsis thaliana GN=PER1 PE=... [more]
PER56_ARATH1.203e-1942.50Peroxidase 56 OS=Arabidopsis thaliana GN=PER56 PE=... [more]
PER31_ARATH1.571e-1939.84Peroxidase 31 OS=Arabidopsis thaliana GN=PER31 PE=... [more]
PER70_ARATH3.499e-1947.17Peroxidase 70 OS=Arabidopsis thaliana GN=PER70 PE=... [more]
PER18_ARATH4.570e-1943.86Peroxidase 18 OS=Arabidopsis thaliana GN=PER18 PE=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0005L24_f Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0005L24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184587 ID=CN184587; Name=CN184587; organism=Citrus sinensis; type=EST; length=522bp
AAAATTACATTAATACTGCAAAGGTTTACCATTATTCTCTTAACTTATTC
TGATACCCATATTAATTTACTTCTAAGCGTAAAATATTAACCAGGAAGAG
GAGTTGGTAATAGAAATTCATTACCAAAGCAACGGATCGTTCAGCCGCAA
TAGTAAGAATATCAGCGCAGGAAACAACCCTTGGACATGCCCTTTCAACG
GCAGCTTTCATGTTATCAATAACTTCAAAACCCCTCGCCGAATTGTTATT
TGGCGCAGCAAATTTCTCGCTGTCTATGGTGTTAGTGCTGTCCAGCAAAA
TCGATGCATCACACCCATCAACAAAACAGTCATGGAAATGAAGCCTGATG
AGGCTGGCACCGATCCGGATATCGGACGAGAAAGCTTTCTTAAGCACATC
CTCGATAGTGTTCAATACATTAGGGCATGTGGAAGAATAAAAAGATGGAG
AAAGTTGAGCTTGAGATGGTGATCCCTCAAGCACAAAAGCAACAAGAAGA
GCTGCTGCGAGAAGATAACCCT
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