CN184585

Overview
NameCN184585
Unique NameCN184585
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length730
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN184585 vs. ExPASy Swiss-Prot
Match: HS90A_CHICK (Heat shock protein HSP 90-alpha OS=Gallus gallus GN=HSP90AA1 PE=3 SV=3)

HSP 1 Score: 167.548 bits (423), Expect = 6.370e-41
Identity = 90/165 (54.55%), Postives = 112/165 (67.88%), Query Frame = -3
Query:  201 LCKVIKDVLGXXXXXXXXXXXXXXSPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDXXXXXXXXXXLTSGFSLDDPNTFGNRIHRMLKLGLSIEEDAGDAD-------ADMPPLEDAADDAEGSKMEEVD 674
            LCK++KD+L               SPCC+VT  YGWTANMERIMKAQALRDNS  GYM++KK +EINP++ I+E LR++A+ADKNDKSVKD          L+SGFSL+DP T  NRI+RM+KLGL I+ED   A+        +MPPLE    D + S+MEEVD
Sbjct:  567 LCKIMKDILEKKVEKVVVSNRLVTSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMAAKKHLEINPDHSIIETLRQKAEADKNDKSVKDLVILLYETALLSSGFSLEDPQTHANRIYRMIKLGLGIDEDDTAAEEASPAVTEEMPPLE---GDDDTSRMEEVD 728          
BLAST of CN184585 vs. ExPASy Swiss-Prot
Match: HS90B_RAT (Heat shock protein HSP 90-beta OS=Rattus norvegicus GN=Hsp90ab1 PE=1 SV=4)

HSP 1 Score: 166.777 bits (421), Expect = 1.087e-40
Identity = 88/165 (53.33%), Postives = 112/165 (67.88%), Query Frame = -3
Query:  201 LCKVIKDVLGXXXXXXXXXXXXXXSPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDXXXXXXXXXXLTSGFSLDDPNTFGNRIHRMLKLGLSIEEDAGDADA-------DMPPLEDAADDAEGSKMEEVD 674
            LCK++K++L               SPCC+VT  YGWTANMERIMKAQALRDNS  GYM +KK +EINP++PI+E LR++A+ADKNDK+VKD          L+SGFSL+DP T  NRI+RM+KLGL I+ED   A+        ++PPLE    D + S+MEEVD
Sbjct:  563 LCKLMKEILDKKVEKVTISNRLVSSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMMAKKHLEINPDHPIVETLRQKAEADKNDKAVKDLVVLLFETALLSSGFSLEDPQTHSNRIYRMIKLGLGIDEDEVTAEEPSAAVPDEIPPLE---GDEDASRMEEVD 724          
BLAST of CN184585 vs. ExPASy Swiss-Prot
Match: HS90B_MOUSE (Heat shock protein HSP 90-beta OS=Mus musculus GN=Hsp90ab1 PE=1 SV=2)

HSP 1 Score: 166.777 bits (421), Expect = 1.087e-40
Identity = 88/165 (53.33%), Postives = 112/165 (67.88%), Query Frame = -3
Query:  201 LCKVIKDVLGXXXXXXXXXXXXXXSPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDXXXXXXXXXXLTSGFSLDDPNTFGNRIHRMLKLGLSIEEDAGDADA-------DMPPLEDAADDAEGSKMEEVD 674
            LCK++K++L               SPCC+VT  YGWTANMERIMKAQALRDNS  GYM +KK +EINP++PI+E LR++A+ADKNDK+VKD          L+SGFSL+DP T  NRI+RM+KLGL I+ED   A+        ++PPLE    D + S+MEEVD
Sbjct:  563 LCKLMKEILDKKVEKVTISNRLVSSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMMAKKHLEINPDHPIVETLRQKAEADKNDKAVKDLVVLLFETALLSSGFSLEDPQTHSNRIYRMIKLGLGIDEDEVTAEEPSAAVPDEIPPLE---GDEDASRMEEVD 724          
BLAST of CN184585 vs. ExPASy Swiss-Prot
Match: HS90B_BOVIN (Heat shock protein HSP 90-beta OS=Bos taurus GN=HSP90AB1 PE=2 SV=3)

HSP 1 Score: 166.777 bits (421), Expect = 1.087e-40
Identity = 88/165 (53.33%), Postives = 112/165 (67.88%), Query Frame = -3
Query:  201 LCKVIKDVLGXXXXXXXXXXXXXXSPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDXXXXXXXXXXLTSGFSLDDPNTFGNRIHRMLKLGLSIEEDAGDADA-------DMPPLEDAADDAEGSKMEEVD 674
            LCK++K++L               SPCC+VT  YGWTANMERIMKAQALRDNS  GYM +KK +EINP++PI+E LR++A+ADKNDK+VKD          L+SGFSL+DP T  NRI+RM+KLGL I+ED   A+        ++PPLE    D + S+MEEVD
Sbjct:  563 LCKLMKEILDKKVEKVTISNRLVSSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMMAKKHLEINPDHPIVETLRQKAEADKNDKAVKDLVVLLFETALLSSGFSLEDPQTHSNRIYRMIKLGLGIDEDEVTAEEPSAAVPDEIPPLE---GDEDASRMEEVD 724          
BLAST of CN184585 vs. ExPASy Swiss-Prot
Match: HS90B_PONAB (Heat shock protein HSP 90-beta OS=Pongo abelii GN=HSP90AB1 PE=2 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 1.419e-40
Identity = 88/165 (53.33%), Postives = 112/165 (67.88%), Query Frame = -3
Query:  201 LCKVIKDVLGXXXXXXXXXXXXXXSPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDXXXXXXXXXXLTSGFSLDDPNTFGNRIHRMLKLGLSIEEDAGDADA-------DMPPLEDAADDAEGSKMEEVD 674
            LCK++K++L               SPCC+VT  YGWTANMERIMKAQALRDNS  GYM +KK +EINP++PI+E LR++A+ADKNDK+VKD          L+SGFSL+DP T  NRI+RM+KLGL I+ED   A+        ++PPLE    D + S+MEEVD
Sbjct:  563 LCKLMKEILDKKVEEVTISNRLVSSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMMAKKHLEINPDHPIVETLRQKAEADKNDKAVKDLVVLLFETALLSSGFSLEDPQTHSNRIYRMIKLGLGIDEDEVAAEEPSAAVPDEIPPLE---GDEDASRMEEVD 724          
BLAST of CN184585 vs. ExPASy Swiss-Prot
Match: HS90B_MACFA (Heat shock protein HSP 90-beta OS=Macaca fascicularis GN=Hsp90ab1 PE=2 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 1.419e-40
Identity = 88/165 (53.33%), Postives = 112/165 (67.88%), Query Frame = -3
Query:  201 LCKVIKDVLGXXXXXXXXXXXXXXSPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDXXXXXXXXXXLTSGFSLDDPNTFGNRIHRMLKLGLSIEEDAGDADA-------DMPPLEDAADDAEGSKMEEVD 674
            LCK++K++L               SPCC+VT  YGWTANMERIMKAQALRDNS  GYM +KK +EINP++PI+E LR++A+ADKNDK+VKD          L+SGFSL+DP T  NRI+RM+KLGL I+ED   A+        ++PPLE    D + S+MEEVD
Sbjct:  563 LCKLMKEILDKKVEKVTISNRLVSSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMMAKKHLEINPDHPIVETLRQKAEADKNDKAVKDLVVLLFETALLSSGFSLEDPQTHSNRIYRMIKLGLGIDEDEVAAEEPSAAVPDEIPPLE---GDEDASRMEEVD 724          
BLAST of CN184585 vs. ExPASy Swiss-Prot
Match: HS90B_HUMAN (Heat shock protein HSP 90-beta OS=Homo sapiens GN=HSP90AB1 PE=1 SV=4)

HSP 1 Score: 166.392 bits (420), Expect = 1.419e-40
Identity = 88/165 (53.33%), Postives = 112/165 (67.88%), Query Frame = -3
Query:  201 LCKVIKDVLGXXXXXXXXXXXXXXSPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDXXXXXXXXXXLTSGFSLDDPNTFGNRIHRMLKLGLSIEEDAGDADA-------DMPPLEDAADDAEGSKMEEVD 674
            LCK++K++L               SPCC+VT  YGWTANMERIMKAQALRDNS  GYM +KK +EINP++PI+E LR++A+ADKNDK+VKD          L+SGFSL+DP T  NRI+RM+KLGL I+ED   A+        ++PPLE    D + S+MEEVD
Sbjct:  563 LCKLMKEILDKKVEKVTISNRLVSSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMMAKKHLEINPDHPIVETLRQKAEADKNDKAVKDLVVLLFETALLSSGFSLEDPQTHSNRIYRMIKLGLGIDEDEVAAEEPNAAVPDEIPPLE---GDEDASRMEEVD 724          
BLAST of CN184585 vs. ExPASy Swiss-Prot
Match: HS90B_HORSE (Heat shock protein HSP 90-beta OS=Equus caballus GN=HSP90AB1 PE=2 SV=3)

HSP 1 Score: 166.392 bits (420), Expect = 1.419e-40
Identity = 88/165 (53.33%), Postives = 112/165 (67.88%), Query Frame = -3
Query:  201 LCKVIKDVLGXXXXXXXXXXXXXXSPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDXXXXXXXXXXLTSGFSLDDPNTFGNRIHRMLKLGLSIEEDAGDADA-------DMPPLEDAADDAEGSKMEEVD 674
            LCK++K++L               SPCC+VT  YGWTANMERIMKAQALRDNS  GYM +KK +EINP++PI+E LR++A+ADKNDK+VKD          L+SGFSL+DP T  NRI+RM+KLGL I+ED   A+        ++PPLE    D + S+MEEVD
Sbjct:  563 LCKLMKEILDKKVEKVTISNRLVSSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMMAKKHLEINPDHPIVETLRQKAEADKNDKAVKDLVVLLFETALLSSGFSLEDPQTHSNRIYRMIKLGLGIDEDEVAAEEPSAAVPDEIPPLE---GDEDASRMEEVD 724          
BLAST of CN184585 vs. ExPASy Swiss-Prot
Match: HS90A_CRIGR (Heat shock protein HSP 90-alpha OS=Cricetulus griseus GN=HSP90AA1 PE=2 SV=2)

HSP 1 Score: 166.392 bits (420), Expect = 1.419e-40
Identity = 89/165 (53.94%), Postives = 111/165 (67.27%), Query Frame = -3
Query:  201 LCKVIKDVLGXXXXXXXXXXXXXXSPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDXXXXXXXXXXLTSGFSLDDPNTFGNRIHRMLKLGLSIEEDAGDAD-------ADMPPLEDAADDAEGSKMEEVD 674
            LCK++KD+L               SPCC+VT  YGWTANMERI+KAQALRDNS  GYM++KK +EINP++ I+E LR++A+ADKNDKSVKD          L+SGFSL+DP T  NRI+RM+KLGL I+ED    D        +MPPLE    D + S+MEEVD
Sbjct:  572 LCKIMKDILEKKVEKVVVSNRLVTSPCCIVTSTYGWTANMERIIKAQALRDNSTMGYMAAKKHLEINPDHSIIETLRQKAEADKNDKSVKDLVILLYETALLSSGFSLEDPQTHANRIYRMIKLGLGIDEDDPTVDDTSAAVTEEMPPLE---GDDDTSRMEEVD 733          
BLAST of CN184585 vs. ExPASy Swiss-Prot
Match: H90A1_DANRE (Heat shock protein HSP 90-alpha 1 OS=Danio rerio GN=hsp90a.1 PE=2 SV=3)

HSP 1 Score: 166.392 bits (420), Expect = 1.419e-40
Identity = 88/165 (53.33%), Postives = 112/165 (67.88%), Query Frame = -3
Query:  201 LCKVIKDVLGXXXXXXXXXXXXXXSPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDXXXXXXXXXXLTSGFSLDDPNTFGNRIHRMLKLGLSIEED-------AGDADADMPPLEDAADDAEGSKMEEVD 674
            LCK++KD+L               SPCC+VT  YGWTANMERIMK+QALRDNS  GYM++KK +EINP +PI+E LR++A+ADKNDK+VKD          L+SGF+LDDP T  NRI+RM+KLGL I++D       +  A+ DMP LE    D + S+MEEVD
Sbjct:  564 LCKIMKDILDKKIEKVTVSNRLVSSPCCIVTSTYGWTANMERIMKSQALRDNSTMGYMTAKKHLEINPAHPIVETLREKAEADKNDKAVKDLVILLFETALLSSGFTLDDPQTHANRIYRMIKLGLGIDDDDSVVEEISQPAEEDMPVLE---GDDDTSRMEEVD 725          
The following BLAST results are available for this feature:
BLAST of CN184585 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 72
Match NameE-valueIdentityDescription
HS90A_CHICK6.370e-4154.55Heat shock protein HSP 90-alpha OS=Gallus gallus G... [more]
HS90B_RAT1.087e-4053.33Heat shock protein HSP 90-beta OS=Rattus norvegicu... [more]
HS90B_MOUSE1.087e-4053.33Heat shock protein HSP 90-beta OS=Mus musculus GN=... [more]
HS90B_BOVIN1.087e-4053.33Heat shock protein HSP 90-beta OS=Bos taurus GN=HS... [more]
HS90B_PONAB1.419e-4053.33Heat shock protein HSP 90-beta OS=Pongo abelii GN=... [more]
HS90B_MACFA1.419e-4053.33Heat shock protein HSP 90-beta OS=Macaca fascicula... [more]
HS90B_HUMAN1.419e-4053.33Heat shock protein HSP 90-beta OS=Homo sapiens GN=... [more]
HS90B_HORSE1.419e-4053.33Heat shock protein HSP 90-beta OS=Equus caballus G... [more]
HS90A_CRIGR1.419e-4053.94Heat shock protein HSP 90-alpha OS=Cricetulus gris... [more]
H90A1_DANRE1.419e-4053.33Heat shock protein HSP 90-alpha 1 OS=Danio rerio G... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0005L22_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0005L22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184585 ID=CN184585; Name=CN184585; organism=Citrus sinensis; type=EST; length=730bp
AGTTTTTTGATTCGGAAACAGCATACTTTTTAAGCATTTGCAAAACAATA
AAACAAAACCTCCACCAAAGAGGGAAAATAAAAATATAAAAGCACTACTC
CCACAGTACTACCACCACAGAACGCATAACAAAAAGAAACTACCTAGTTA
AAAGAGTTTCATGAAAAAAGACTACTATAGCAGACTATTATAGCTTCTTA
ATCAACTTCCTCCATCTTGCTGCCCTCAGCATCGTCAGCAGCATCCTCCA
ATGGTGGCATGTCAGCATCAGCATCACCAGCATCCTCCTCGATGCTCAGC
CCGAGTTTCAACATCCTGTGGATTCTGTTGCCGAAAGTGTTAGGGTCATC
AAGGCTGAAACCAGAAGTGAGGAGAGCAGTCTCAAAGAGCAGAAGGACAA
GGTCCTTCACAGACTTGTCATTCTTGTCAGCATCAGCCCTCTTCCTGAGC
TCCTCCATGATGGGGTTCTCCGGATTGATCTCCATGGTCTTCTTGCTGGA
CATGTAACCAGCCATGCTGTTGTCTCTCAAGGCCTGAGCCTTCATGATCC
TCTCCATGTTGGCTGTCCATCCATACTCACCAGTCACCAAACAGCAGGGT
GAGTCAACAACACGGTCAGACACCACAACCTTCTCGACCTTGTCACCCAA
AACATCCTTGATCACCTTGCAGAGACCCTCAAATTTCTCCTTCAAGGTTT
CCTTCTTCTTCNTCTCATCTTCACTCTCGT
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