CN184585

Overview
NameCN184585
Unique NameCN184585
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length730
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13133 contig Csv1_Contig13133:59..788. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CN184585 vs. ExPASy Swiss-Prot
Match: ENPL_HORVU (Endoplasmin homolog OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 6.199e-20
Identity = 50/139 (35.97%), Postives = 80/139 (57.55%), Query Frame = -3 
Query:  201 PCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDXXXXXXXXXXLTSGFSLDDPNTFGNRIHRMLKLGLSIEEDAG---DADADMPPLED---AADDAEGSKMEEVD 599
            PC +VT +YGW++NME+IM+AQ L D S   YM  K+ +EINP +PI++ELR +   D + + +K           + SGF+L DP  F + I+R ++  L +  DA    + + + P +E+   A  +AE  + E+ D
Sbjct:  667 PCVVVTSKYGWSSNMEKIMQAQTLSDASKQAYMRGKRVLEINPRHPIIKELRDKVAQDSDSEGLKQTARLVYQTALMESGFNLPDPKDFASSIYRSVQKSLDLSPDAAVEEEEEVEEPEVEEKESAKQEAEEPEHEQYD 805
[Close]
BLAST of CN184585 vs. ExPASy Swiss-Prot
Match: ENPL_RABIT (Endoplasmin (Fragment) OS=Oryctolagus cuniculus GN=HSP90B1 PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.356e-19
Identity = 52/134 (38.81%), Postives = 78/134 (58.21%), Query Frame = -3 
Query:  201 PCCLVTGEYGWTANMERIMKAQALRDNS-MAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDXXXXXXXXXXLTSGFSLDDPNTFGNRIHRMLKLGLSIEEDAGDADADMPPLEDAADDAEGSKMEEVD 599
            PC LV  +YGW+ANMERIMKAQA +       Y +S+KT EINP +P++ ++ +     ++DK+V D          L SG+ L D   +G+RI R+++L L+I+ DA   +      ED  +D E  + EE+D
Sbjct:  563 PCALVASQYGWSANMERIMKAQAYQTGKDSTKYYASQKTFEINPRHPLIRDMLR---IKEDDKTVMDLAVVLFETAILRSGYLLPDTKAYGDRIERIVRLSLNIDPDAKVEEEPEEEPEDTTEDTEQDEEEEMD 693
The following BLAST results are available for this feature:
BLAST of CN184585 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 72
Match NameE-valueIdentityDescription
ENPL_HORVU6.199e-2035.97Endoplasmin homolog OS=Hordeum vulgare PE=2 SV=1[more]
ENPL_RABIT2.356e-1938.81Endoplasmin (Fragment) OS=Oryctolagus cuniculus GN... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0005L22_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0005L22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184585 ID=CN184585; Name=CN184585; organism=Citrus sinensis; type=EST; length=730bp
AGTTTTTTGATTCGGAAACAGCATACTTTTTAAGCATTTGCAAAACAATA
AAACAAAACCTCCACCAAAGAGGGAAAATAAAAATATAAAAGCACTACTC
CCACAGTACTACCACCACAGAACGCATAACAAAAAGAAACTACCTAGTTA
AAAGAGTTTCATGAAAAAAGACTACTATAGCAGACTATTATAGCTTCTTA
ATCAACTTCCTCCATCTTGCTGCCCTCAGCATCGTCAGCAGCATCCTCCA
ATGGTGGCATGTCAGCATCAGCATCACCAGCATCCTCCTCGATGCTCAGC
CCGAGTTTCAACATCCTGTGGATTCTGTTGCCGAAAGTGTTAGGGTCATC
AAGGCTGAAACCAGAAGTGAGGAGAGCAGTCTCAAAGAGCAGAAGGACAA
GGTCCTTCACAGACTTGTCATTCTTGTCAGCATCAGCCCTCTTCCTGAGC
TCCTCCATGATGGGGTTCTCCGGATTGATCTCCATGGTCTTCTTGCTGGA
CATGTAACCAGCCATGCTGTTGTCTCTCAAGGCCTGAGCCTTCATGATCC
TCTCCATGTTGGCTGTCCATCCATACTCACCAGTCACCAAACAGCAGGGT
GAGTCAACAACACGGTCAGACACCACAACCTTCTCGACCTTGTCACCCAA
AACATCCTTGATCACCTTGCAGAGACCCTCAAATTTCTCCTTCAAGGTTT
CCTTCTTCTTCNTCTCATCTTCACTCTCGT
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