CN184584

Overview
NameCN184584
Unique NameCN184584
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length395
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11542 contig Csv1_Contig11542:77..471. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CN184584 vs. ExPASy Swiss-Prot
Match: HS90A_PIG (Heat shock protein HSP 90-alpha OS=Sus scrofa GN=HSP90AA1 PE=2 SV=3)

HSP 1 Score: 178.333 bits (451), Expect = 1.027e-44
Identity = 90/114 (78.95%), Postives = 104/114 (91.23%), Query Frame = 3 
Query:   54 ETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVS 395
            E ETFAFQAEI QL+SLIINTFYSNKEIFLRELISNSSDALDKIR+ESLTD SKLD+  EL I++IP+K + +L+I+D+GIGMTKADL+NNLGTIA+SGTK FMEAL AGAD+S
Sbjct:   16 EVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLDSGKELHINLIPNKQDRTLTIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADIS 129
[Close]
BLAST of CN184584 vs. ExPASy Swiss-Prot
Match: HS90A_PANTR (Heat shock protein HSP 90-alpha OS=Pan troglodytes GN=HSP90AA1 PE=2 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 1.027e-44
Identity = 90/114 (78.95%), Postives = 104/114 (91.23%), Query Frame = 3 
Query:   54 ETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVS 395
            E ETFAFQAEI QL+SLIINTFYSNKEIFLRELISNSSDALDKIR+ESLTD SKLD+  EL I++IP+K + +L+I+D+GIGMTKADL+NNLGTIA+SGTK FMEAL AGAD+S
Sbjct:   16 EVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLDSGKELHINLIPNKQDRTLTIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADIS 129
[Close]
BLAST of CN184584 vs. ExPASy Swiss-Prot
Match: HS90A_MACFA (Heat shock protein HSP 90-alpha OS=Macaca fascicularis GN=HSP90AA1 PE=2 SV=3)

HSP 1 Score: 178.333 bits (451), Expect = 1.027e-44
Identity = 90/114 (78.95%), Postives = 104/114 (91.23%), Query Frame = 3 
Query:   54 ETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVS 395
            E ETFAFQAEI QL+SLIINTFYSNKEIFLRELISNSSDALDKIR+ESLTD SKLD+  EL I++IP+K + +L+I+D+GIGMTKADL+NNLGTIA+SGTK FMEAL AGAD+S
Sbjct:   16 EVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLDSGKELHINLIPNKQDRTLTIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADIS 129
[Close]
BLAST of CN184584 vs. ExPASy Swiss-Prot
Match: HS90A_HUMAN (Heat shock protein HSP 90-alpha OS=Homo sapiens GN=HSP90AA1 PE=1 SV=5)

HSP 1 Score: 178.333 bits (451), Expect = 1.027e-44
Identity = 90/114 (78.95%), Postives = 104/114 (91.23%), Query Frame = 3 
Query:   54 ETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVS 395
            E ETFAFQAEI QL+SLIINTFYSNKEIFLRELISNSSDALDKIR+ESLTD SKLD+  EL I++IP+K + +L+I+D+GIGMTKADL+NNLGTIA+SGTK FMEAL AGAD+S
Sbjct:   16 EVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLDSGKELHINLIPNKQDRTLTIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADIS 129
[Close]
BLAST of CN184584 vs. ExPASy Swiss-Prot
Match: HS90A_HORSE (Heat shock protein HSP 90-alpha (Fragment) OS=Equus caballus GN=HSP90AA1 PE=2 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 1.027e-44
Identity = 90/114 (78.95%), Postives = 104/114 (91.23%), Query Frame = 3 
Query:   54 ETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVS 395
            E ETFAFQAEI QL+SLIINTFYSNKEIFLRELISNSSDALDKIR+ESLTD SKLD+  EL I++IP+K + +L+I+D+GIGMTKADL+NNLGTIA+SGTK FMEAL AGAD+S
Sbjct:    5 EVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLDSGKELHINLIPNKQDRTLTIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADIS 118
[Close]
BLAST of CN184584 vs. ExPASy Swiss-Prot
Match: HS90A_BOVIN (Heat shock protein HSP 90-alpha OS=Bos taurus GN=HSP90AA1 PE=2 SV=3)

HSP 1 Score: 178.333 bits (451), Expect = 1.027e-44
Identity = 90/114 (78.95%), Postives = 104/114 (91.23%), Query Frame = 3 
Query:   54 ETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVS 395
            E ETFAFQAEI QL+SLIINTFYSNKEIFLRELISNSSDALDKIR+ESLTD SKLD+  EL I++IP+K + +L+I+D+GIGMTKADL+NNLGTIA+SGTK FMEAL AGAD+S
Sbjct:   16 EVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLDSGKELHINLIPNKQDRTLTIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADIS 129
[Close]
BLAST of CN184584 vs. ExPASy Swiss-Prot
Match: HS90A_MOUSE (Heat shock protein HSP 90-alpha OS=Mus musculus GN=Hsp90aa1 PE=1 SV=4)

HSP 1 Score: 177.948 bits (450), Expect = 1.341e-44
Identity = 90/114 (78.95%), Postives = 103/114 (90.35%), Query Frame = 3 
Query:   54 ETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVS 395
            E ETFAFQAEI QL+SLIINTFYSNKEIFLRELISNSSDALDKIR+ESLTD SKLD+  EL I++IP K + +L+I+D+GIGMTKADL+NNLGTIA+SGTK FMEAL AGAD+S
Sbjct:   16 EVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLDSGKELHINLIPSKQDRTLTIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADIS 129
[Close]
BLAST of CN184584 vs. ExPASy Swiss-Prot
Match: HSP83_ANOGA (Heat shock protein 83 OS=Anopheles gambiae GN=Hsp83 PE=3 SV=3)

HSP 1 Score: 177.563 bits (449), Expect = 1.752e-44
Identity = 92/114 (80.70%), Postives = 103/114 (90.35%), Query Frame = 3 
Query:   54 ETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVS 395
            E ETFAFQAEI QL+SLIINTFYSNKEIFLRELISNSSDALDKIR+ESLTD SKL++  ELFI IIP+K   +L++ID+GIGMTKADLVNNLGTIA+SGTK FMEAL AGAD+S
Sbjct:    6 EGETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLESGKELFIKIIPNKEAGTLTLIDTGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADIS 119
[Close]
BLAST of CN184584 vs. ExPASy Swiss-Prot
Match: H90A1_DANRE (Heat shock protein HSP 90-alpha 1 OS=Danio rerio GN=hsp90a.1 PE=2 SV=3)

HSP 1 Score: 177.563 bits (449), Expect = 1.752e-44
Identity = 91/117 (77.78%), Postives = 103/117 (88.03%), Query Frame = 3 
Query:   45 MASETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVS 395
            M  E ETFAFQAEI QL+SLIINTFYSNKEIFLRELISNSSDALDKIR+ESLTD SKLD+  +L I +IPD+   +L+IID+GIGMTKADL+NNLGTIA+SGTK FMEAL AGAD+S
Sbjct:   10 MEEEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLDSCKDLKIELIPDQKERTLTIIDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADIS 126
[Close]
BLAST of CN184584 vs. ExPASy Swiss-Prot
Match: HS902_HUMAN (Putative heat shock protein HSP 90-alpha A2 OS=Homo sapiens GN=HSP90AA2 PE=1 SV=2)

HSP 1 Score: 175.252 bits (443), Expect = 8.695e-44
Identity = 89/114 (78.07%), Postives = 103/114 (90.35%), Query Frame = 3 
Query:   54 ETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVS 395
            E ETFAFQAEI QL+SLIINTFYSNKEIFLRELISNSSDALDKI +ESLTD SKLD+  EL I++IP+K + +L+I+D+GIGMTKADL+NNLGTIA+SGTK FMEAL AGAD+S
Sbjct:   16 EVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIWYESLTDPSKLDSGKELHINLIPNKQDQTLTIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADIS 129
The following BLAST results are available for this feature:
BLAST of CN184584 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 375
Match NameE-valueIdentityDescription
HS90A_PIG1.027e-4478.95Heat shock protein HSP 90-alpha OS=Sus scrofa GN=H... [more]
HS90A_PANTR1.027e-4478.95Heat shock protein HSP 90-alpha OS=Pan troglodytes... [more]
HS90A_MACFA1.027e-4478.95Heat shock protein HSP 90-alpha OS=Macaca fascicul... [more]
HS90A_HUMAN1.027e-4478.95Heat shock protein HSP 90-alpha OS=Homo sapiens GN... [more]
HS90A_HORSE1.027e-4478.95Heat shock protein HSP 90-alpha (Fragment) OS=Equu... [more]
HS90A_BOVIN1.027e-4478.95Heat shock protein HSP 90-alpha OS=Bos taurus GN=H... [more]
HS90A_MOUSE1.341e-4478.95Heat shock protein HSP 90-alpha OS=Mus musculus GN... [more]
HSP83_ANOGA1.752e-4480.70Heat shock protein 83 OS=Anopheles gambiae GN=Hsp8... [more]
H90A1_DANRE1.752e-4477.78Heat shock protein HSP 90-alpha 1 OS=Danio rerio G... [more]
HS902_HUMAN8.695e-4478.07Putative heat shock protein HSP 90-alpha A2 OS=Hom... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0005L22_f Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0005L22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184584 ID=CN184584; Name=CN184584; organism=Citrus sinensis; type=EST; length=395bp
AACTCAGAAGAGATCGTTTTTTGGTTGAACGGCAGGTCGTTTCGATGGCA
TCAGAGACAGAGACGTTTGCCTTTCAGGCTGAGATCAACCAGTTGTTGAG
TTTGATCATCAACACCTTTTACAGTAACAAGGAGATCTTTCTTCGTGAGC
TCATCAGCAACTCCTCCGATGCATTGGATAAGATCAGATTTGAAAGCTTG
ACAGACAAGAGCAAGCTAGATGCCCAACCAGAGCTTTTCATTCACATTAT
CCCTGATAAGACCAACAACTCATTGTCTATTATTGACAGTGGTATTGGCA
TGACTAAGGCTGATTTGGTGAACAACCTTGGTACAATTGCTAGGTCTGGG
ACCAAAGAGTTCATGGAGGCATTGGCTGCTGGGGCGGATGTGAGC
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