CN184584

Overview
NameCN184584
Unique NameCN184584
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length395
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11542 contig Csv1_Contig11542:77..471. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN184584 vs. ExPASy Swiss-Prot
Match: HSP90_EIMTE (Heat shock protein 90 OS=Eimeria tenella GN=HSP90 PE=2 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 1.136e-43
Identity = 87/112 (77.68%), Postives = 100/112 (89.29%), Query Frame = 3
Query:   60 ETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVS 395
            ETFAF A+I QL+SLIINTFYSNKEIFLRELISN+SDALDKIR+E++T+  KL  +PELFI +IPDK NN+L+I +SGIGMTKADLVNNLGTIARSGTK FMEAL AG D+S
Sbjct:    5 ETFAFNADIQQLMSLIINTFYSNKEIFLRELISNASDALDKIRYEAITEPEKLKTKPELFIRLIPDKANNTLTIENSGIGMTKADLVNNLGTIARSGTKAFMEALQAGGDIS 116          
BLAST of CN184584 vs. ExPASy Swiss-Prot
Match: HSP83_TRYBB (Heat shock protein 83 OS=Trypanosoma brucei brucei GN=HSP83 PE=3 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 2.530e-43
Identity = 88/113 (77.88%), Postives = 100/113 (88.50%), Query Frame = 3
Query:   57 TETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVS 395
            TETFAFQAEINQL+SLIINTFYSNKEIFLRELISNSSDA DKIR++SLT++S L  +P L I +IPD+ N +L++ DSGIGMTKADLVNNLGTIARSGTK FMEAL AG D+S
Sbjct:    2 TETFAFQAEINQLMSLIINTFYSNKEIFLRELISNSSDACDKIRYQSLTNQSVLGDEPHLRIRVIPDRVNKTLTVEDSGIGMTKADLVNNLGTIARSGTKSFMEALEAGGDMS 114          
BLAST of CN184584 vs. ExPASy Swiss-Prot
Match: HS90B_BOVIN (Heat shock protein HSP 90-beta OS=Bos taurus GN=HSP90AB1 PE=2 SV=3)

HSP 1 Score: 173.326 bits (438), Expect = 3.304e-43
Identity = 89/114 (78.07%), Postives = 101/114 (88.60%), Query Frame = 3
Query:   54 ETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVS 395
            E ETFAFQAEI QL+SLIINTFYSNKEIFLRELISN+SDALDKIR+ESLTD SKLD+  EL I IIP+    +L+++D+GIGMTKADLVNNLGTIA+SGTK FMEAL AGAD+S
Sbjct:   11 EVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNASDALDKIRYESLTDPSKLDSGKELKIDIIPNPQERTLTLVDTGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADIS 124          
BLAST of CN184584 vs. ExPASy Swiss-Prot
Match: HSP90_PODAN (Heat shock protein 90 homolog OS=Podospora anserina GN=MOD-E PE=3 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 4.315e-43
Identity = 89/112 (79.46%), Postives = 100/112 (89.29%), Query Frame = 3
Query:   60 ETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVS 395
            ETF FQAEI+QLLSLIINT YSNKEIFLREL+SN+SDALDKIR+ESL+D SKLD   +L I IIPDK N +L+I D+GIGMTKADLVNNLGTIARSGTK+FMEAL AGAD+S
Sbjct:    3 ETFEFQAEISQLLSLIINTVYSNKEIFLRELVSNASDALDKIRYESLSDPSKLDTGKDLRIDIIPDKENKTLTIQDTGIGMTKADLVNNLGTIARSGTKQFMEALTAGADIS 114          
BLAST of CN184584 vs. ExPASy Swiss-Prot
Match: HS90B_RAT (Heat shock protein HSP 90-beta OS=Rattus norvegicus GN=Hsp90ab1 PE=1 SV=4)

HSP 1 Score: 172.94 bits (437), Expect = 4.315e-43
Identity = 88/114 (77.19%), Postives = 101/114 (88.60%), Query Frame = 3
Query:   54 ETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVS 395
            E ETFAFQAEI QL+SLIINTFYSNKEIFLRELISN+SDALDKIR+ESLTD SKLD+  EL I IIP+    +L+++D+GIGMTKADL+NNLGTIA+SGTK FMEAL AGAD+S
Sbjct:   11 EVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNASDALDKIRYESLTDPSKLDSGKELKIDIIPNPQERTLTLVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADIS 124          
BLAST of CN184584 vs. ExPASy Swiss-Prot
Match: HS90B_PONAB (Heat shock protein HSP 90-beta OS=Pongo abelii GN=HSP90AB1 PE=2 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 4.315e-43
Identity = 88/114 (77.19%), Postives = 101/114 (88.60%), Query Frame = 3
Query:   54 ETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVS 395
            E ETFAFQAEI QL+SLIINTFYSNKEIFLRELISN+SDALDKIR+ESLTD SKLD+  EL I IIP+    +L+++D+GIGMTKADL+NNLGTIA+SGTK FMEAL AGAD+S
Sbjct:   11 EVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNASDALDKIRYESLTDPSKLDSGKELKIDIIPNPQERTLTLVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADIS 124          
BLAST of CN184584 vs. ExPASy Swiss-Prot
Match: HS90B_MACFA (Heat shock protein HSP 90-beta OS=Macaca fascicularis GN=Hsp90ab1 PE=2 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 4.315e-43
Identity = 88/114 (77.19%), Postives = 101/114 (88.60%), Query Frame = 3
Query:   54 ETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVS 395
            E ETFAFQAEI QL+SLIINTFYSNKEIFLRELISN+SDALDKIR+ESLTD SKLD+  EL I IIP+    +L+++D+GIGMTKADL+NNLGTIA+SGTK FMEAL AGAD+S
Sbjct:   11 EVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNASDALDKIRYESLTDPSKLDSGKELKIDIIPNPQERTLTLVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADIS 124          
BLAST of CN184584 vs. ExPASy Swiss-Prot
Match: HS90B_HUMAN (Heat shock protein HSP 90-beta OS=Homo sapiens GN=HSP90AB1 PE=1 SV=4)

HSP 1 Score: 172.94 bits (437), Expect = 4.315e-43
Identity = 88/114 (77.19%), Postives = 101/114 (88.60%), Query Frame = 3
Query:   54 ETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVS 395
            E ETFAFQAEI QL+SLIINTFYSNKEIFLRELISN+SDALDKIR+ESLTD SKLD+  EL I IIP+    +L+++D+GIGMTKADL+NNLGTIA+SGTK FMEAL AGAD+S
Sbjct:   11 EVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNASDALDKIRYESLTDPSKLDSGKELKIDIIPNPQERTLTLVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADIS 124          
BLAST of CN184584 vs. ExPASy Swiss-Prot
Match: HS90B_HORSE (Heat shock protein HSP 90-beta OS=Equus caballus GN=HSP90AB1 PE=2 SV=3)

HSP 1 Score: 172.94 bits (437), Expect = 4.315e-43
Identity = 88/114 (77.19%), Postives = 101/114 (88.60%), Query Frame = 3
Query:   54 ETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVS 395
            E ETFAFQAEI QL+SLIINTFYSNKEIFLRELISN+SDALDKIR+ESLTD SKLD+  EL I IIP+    +L+++D+GIGMTKADL+NNLGTIA+SGTK FMEAL AGAD+S
Sbjct:   11 EVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNASDALDKIRYESLTDPSKLDSGKELKIDIIPNPQERTLTLVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADIS 124          
BLAST of CN184584 vs. ExPASy Swiss-Prot
Match: HSP83_LEIIN (Heat shock protein 83-1 OS=Leishmania infantum GN=HSP83-1 PE=3 SV=2)

HSP 1 Score: 172.555 bits (436), Expect = 5.636e-43
Identity = 87/113 (76.99%), Postives = 98/113 (86.73%), Query Frame = 3
Query:   57 TETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVS 395
            TETFAFQAEINQL+SLIINTFYSNKEIFLRELISN+SDA DKIR++SLTD S L   P L I ++PDK N +L++ D+GIGMTKADLVNNLGTIARSGTK FMEAL AG D+S
Sbjct:    2 TETFAFQAEINQLMSLIINTFYSNKEIFLRELISNASDACDKIRYQSLTDPSVLGESPRLCIRVVPDKENKTLTVEDNGIGMTKADLVNNLGTIARSGTKAFMEALEAGGDMS 114          
The following BLAST results are available for this feature:
BLAST of CN184584 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 375
Match NameE-valueIdentityDescription
HSP90_EIMTE1.136e-4377.68Heat shock protein 90 OS=Eimeria tenella GN=HSP90 ... [more]
HSP83_TRYBB2.530e-4377.88Heat shock protein 83 OS=Trypanosoma brucei brucei... [more]
HS90B_BOVIN3.304e-4378.07Heat shock protein HSP 90-beta OS=Bos taurus GN=HS... [more]
HSP90_PODAN4.315e-4379.46Heat shock protein 90 homolog OS=Podospora anserin... [more]
HS90B_RAT4.315e-4377.19Heat shock protein HSP 90-beta OS=Rattus norvegicu... [more]
HS90B_PONAB4.315e-4377.19Heat shock protein HSP 90-beta OS=Pongo abelii GN=... [more]
HS90B_MACFA4.315e-4377.19Heat shock protein HSP 90-beta OS=Macaca fascicula... [more]
HS90B_HUMAN4.315e-4377.19Heat shock protein HSP 90-beta OS=Homo sapiens GN=... [more]
HS90B_HORSE4.315e-4377.19Heat shock protein HSP 90-beta OS=Equus caballus G... [more]
HSP83_LEIIN5.636e-4376.99Heat shock protein 83-1 OS=Leishmania infantum GN=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0005L22_f Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0005L22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184584 ID=CN184584; Name=CN184584; organism=Citrus sinensis; type=EST; length=395bp
AACTCAGAAGAGATCGTTTTTTGGTTGAACGGCAGGTCGTTTCGATGGCA
TCAGAGACAGAGACGTTTGCCTTTCAGGCTGAGATCAACCAGTTGTTGAG
TTTGATCATCAACACCTTTTACAGTAACAAGGAGATCTTTCTTCGTGAGC
TCATCAGCAACTCCTCCGATGCATTGGATAAGATCAGATTTGAAAGCTTG
ACAGACAAGAGCAAGCTAGATGCCCAACCAGAGCTTTTCATTCACATTAT
CCCTGATAAGACCAACAACTCATTGTCTATTATTGACAGTGGTATTGGCA
TGACTAAGGCTGATTTGGTGAACAACCTTGGTACAATTGCTAGGTCTGGG
ACCAAAGAGTTCATGGAGGCATTGGCTGCTGGGGCGGATGTGAGC
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