CN184584

Overview
NameCN184584
Unique NameCN184584
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length395
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11542 contig Csv1_Contig11542:77..471. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN184584 vs. ExPASy Swiss-Prot
Match: HSP85_TRYCR (Heat shock-like 85 kDa protein OS=Trypanosoma cruzi PE=3 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 2.368e-41
Identity = 84/113 (74.34%), Postives = 99/113 (87.61%), Query Frame = 3
Query:   57 TETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVS 395
            TETFAFQAEINQL+SLIINTFYSNKEIFLRELISNSSDA DKIR++SLT+++ L  +  L I ++PDK N +L++ D+GIGMTKA+LVNNLGTIARSGTK FMEAL AG D+S
Sbjct:    2 TETFAFQAEINQLMSLIINTFYSNKEIFLRELISNSSDACDKIRYQSLTNQAVLGDESHLRIRVVPDKANKTLTVEDTGIGMTKAELVNNLGTIARSGTKAFMEALEAGGDMS 114          
BLAST of CN184584 vs. ExPASy Swiss-Prot
Match: HSP90_CANAL (Heat shock protein 90 homolog OS=Candida albicans GN=HSP90 PE=1 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 3.093e-41
Identity = 85/115 (73.91%), Postives = 100/115 (86.96%), Query Frame = 3
Query:   51 SETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVS 395
            ++ ET  F AEI+QL+SLIINT YSNKEIFLRELISN+SDALDKIR+++L+D S+L+++PELFI IIP K    L I DSGIGMTKADLVNNLGTIA+SGTK FMEAL+AGADVS
Sbjct:    4 AKVETHEFTAEISQLMSLIINTVYSNKEIFLRELISNASDALDKIRYQALSDPSQLESEPELFIRIIPQKDQKVLEIRDSGIGMTKADLVNNLGTIAKSGTKSFMEALSAGADVS 118          
BLAST of CN184584 vs. ExPASy Swiss-Prot
Match: HSC90_DICDI (Heat shock cognate 90 kDa protein OS=Dictyostelium discoideum GN=hspD PE=1 SV=2)

HSP 1 Score: 164.851 bits (416), Expect = 1.175e-40
Identity = 85/116 (73.28%), Postives = 100/116 (86.21%), Query Frame = 3
Query:   51 SETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAG-ADVS 395
            S+ E F FQAEINQL+SLIINTFYSNKE+FLRELISN+SDALDKIR++SLTD S L+++ EL I IIPDKT  +L++IDSGIGMTK D+V NLGTIARSGTK FME L +G AD+S
Sbjct:    4 SQVERFTFQAEINQLMSLIINTFYSNKEVFLRELISNASDALDKIRYQSLTDASVLESKTELEIKIIPDKTAKTLTLIDSGIGMTKTDMVKNLGTIARSGTKNFMEQLQSGAADIS 119          
BLAST of CN184584 vs. ExPASy Swiss-Prot
Match: HSP82_YEAST (ATP-dependent molecular chaperone HSP82 OS=Saccharomyces cerevisiae GN=HSP82 PE=1 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 9.948e-40
Identity = 82/113 (72.57%), Postives = 96/113 (84.96%), Query Frame = 3
Query:   57 TETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVS 395
            +ETF FQAEI QL+SLIINT YSNKEIFLRELISN+SDALDKIR++SL+D  +L+ +P+LFI I P      L I DSGIGMTKA+L+NNLGTIA+SGTK FMEAL+AGADVS
Sbjct:    3 SETFEFQAEITQLMSLIINTVYSNKEIFLRELISNASDALDKIRYKSLSDPKQLETEPDLFIRITPKPEQKVLEIRDSGIGMTKAELINNLGTIAKSGTKAFMEALSAGADVS 115          
BLAST of CN184584 vs. ExPASy Swiss-Prot
Match: HSP82_ASHGO (Heat shock protein HSP82 OS=Ashbya gossypii GN=HSP82 PE=3 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 2.216e-39
Identity = 82/115 (71.30%), Postives = 95/115 (82.61%), Query Frame = 3
Query:   51 SETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVS 395
            S  ET+ FQAEI QL+SLIINT YSNKEIFLRELISN+SDALDKIR++SL+D   L++ PELFI + P      L I DSGIGMTKA+L+NNLGTIA+SGTK FMEAL+AGADVS
Sbjct:    2 SSQETYEFQAEITQLMSLIINTVYSNKEIFLRELISNASDALDKIRYQSLSDPKVLESDPELFIRLTPKPEEKVLEIRDSGIGMTKAELINNLGTIAKSGTKAFMEALSAGADVS 116          
BLAST of CN184584 vs. ExPASy Swiss-Prot
Match: HSC82_YEAST (ATP-dependent molecular chaperone HSC82 OS=Saccharomyces cerevisiae GN=HSC82 PE=1 SV=4)

HSP 1 Score: 160.614 bits (405), Expect = 2.216e-39
Identity = 81/112 (72.32%), Postives = 95/112 (84.82%), Query Frame = 3
Query:   60 ETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVS 395
            ETF FQAEI QL+SLIINT YSNKEIFLRELISN+SDALDKIR+++L+D  +L+ +P+LFI I P      L I DSGIGMTKA+L+NNLGTIA+SGTK FMEAL+AGADVS
Sbjct:    4 ETFEFQAEITQLMSLIINTVYSNKEIFLRELISNASDALDKIRYQALSDPKQLETEPDLFIRITPKPEEKVLEIRDSGIGMTKAELINNLGTIAKSGTKAFMEALSAGADVS 115          
BLAST of CN184584 vs. ExPASy Swiss-Prot
Match: HSP83_DROPB (Heat shock protein 83 (Fragment) OS=Drosophila pseudoobscura bogotana GN=Hsp83 PE=3 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 4.937e-39
Identity = 84/117 (71.79%), Postives = 94/117 (80.34%), Query Frame = 3
Query:   45 MASETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVS 395
            M  E ETFAFQAEI QL+SLIINTFYSNKEIFLRELISN+SDALDKIR+ S TD  KL          IP+KT  +L+IID+GI MTK+DLVNNLGTIA+SGTK FMEAL AGAD+S
Sbjct:    1 MPEEAETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNASDALDKIRYXSXTDPXKLXXXXXXXXXXIPNKTAGTLTIIDTGIXMTKSDLVNNLGTIAKSGTKAFMEALQAGADIS 117          
BLAST of CN184584 vs. ExPASy Swiss-Prot
Match: HSP90_THEAN (Heat shock protein 90 OS=Theileria annulata GN=TA12105 PE=3 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 6.448e-39
Identity = 81/122 (66.39%), Postives = 102/122 (83.61%), Query Frame = 3
Query:   45 MASETET-----FAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVS 395
            MAS+ ET     +AF A+I+QLLSLIIN FYSNKEIFLRELISN+SDAL+KIR+E++ D  +++ QP+ +I +  DK NN+L+I DSGIGMTKADLVNNLGTIA+SGT+ FMEAL AG+D+S
Sbjct:    1 MASKEETPDQEVYAFNADISQLLSLIINAFYSNKEIFLRELISNASDALEKIRYEAIKDPKQIEDQPDYYIRLYADKNNNTLTIEDSGIGMTKADLVNNLGTIAKSGTRAFMEALQAGSDMS 122          
BLAST of CN184584 vs. ExPASy Swiss-Prot
Match: HSP90_THEPA (Heat shock protein 90 OS=Theileria parva GN=TP02_0244 PE=2 SV=2)

HSP 1 Score: 158.688 bits (400), Expect = 8.422e-39
Identity = 77/114 (67.54%), Postives = 98/114 (85.96%), Query Frame = 3
Query:   54 ETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVS 395
            + E +AF A+I+QLLSLIIN FYSNKEIFLRELISN+SDAL+KIR+E++ D  +++ QP+ +I +  DK NN+L+I DSGIGMTKADLVNNLGTIA+SGT+ FMEAL AG+D+S
Sbjct:    9 DQEVYAFNADISQLLSLIINAFYSNKEIFLRELISNASDALEKIRYEAIKDPKQIEDQPDYYIRLYADKNNNTLTIEDSGIGMTKADLVNNLGTIAKSGTRAFMEALQAGSDMS 122          
BLAST of CN184584 vs. ExPASy Swiss-Prot
Match: H90B3_HUMAN (Putative heat shock protein HSP 90-beta-3 OS=Homo sapiens GN=HSP90AB3P PE=5 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 1.216e-37
Identity = 80/109 (73.39%), Postives = 94/109 (86.24%), Query Frame = 3
Query:   54 ETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAA 380
            E ETFAFQAEI QL+SLIINTFYSN+EIFL+ELISN+SDALDKIR+ESLTD SKLD+  EL I IIP+    +L+++D+GIGMTKADL+NNL TIA+SGTK  MEAL A
Sbjct:   11 EVETFAFQAEIAQLISLIINTFYSNEEIFLQELISNASDALDKIRYESLTDPSKLDSGKELKIDIIPNPQERTLALVDTGIGMTKADLINNLRTIAKSGTKACMEALQA 119          
The following BLAST results are available for this feature:
BLAST of CN184584 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 375
Match NameE-valueIdentityDescription
HSP85_TRYCR2.368e-4174.34Heat shock-like 85 kDa protein OS=Trypanosoma cruz... [more]
HSP90_CANAL3.093e-4173.91Heat shock protein 90 homolog OS=Candida albicans ... [more]
HSC90_DICDI1.175e-4073.28Heat shock cognate 90 kDa protein OS=Dictyostelium... [more]
HSP82_YEAST9.948e-4072.57ATP-dependent molecular chaperone HSP82 OS=Sacchar... [more]
HSP82_ASHGO2.216e-3971.30Heat shock protein HSP82 OS=Ashbya gossypii GN=HSP... [more]
HSC82_YEAST2.216e-3972.32ATP-dependent molecular chaperone HSC82 OS=Sacchar... [more]
HSP83_DROPB4.937e-3971.79Heat shock protein 83 (Fragment) OS=Drosophila pse... [more]
HSP90_THEAN6.448e-3966.39Heat shock protein 90 OS=Theileria annulata GN=TA1... [more]
HSP90_THEPA8.422e-3967.54Heat shock protein 90 OS=Theileria parva GN=TP02_0... [more]
H90B3_HUMAN1.216e-3773.39Putative heat shock protein HSP 90-beta-3 OS=Homo ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0005L22_f Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0005L22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184584 ID=CN184584; Name=CN184584; organism=Citrus sinensis; type=EST; length=395bp
AACTCAGAAGAGATCGTTTTTTGGTTGAACGGCAGGTCGTTTCGATGGCA
TCAGAGACAGAGACGTTTGCCTTTCAGGCTGAGATCAACCAGTTGTTGAG
TTTGATCATCAACACCTTTTACAGTAACAAGGAGATCTTTCTTCGTGAGC
TCATCAGCAACTCCTCCGATGCATTGGATAAGATCAGATTTGAAAGCTTG
ACAGACAAGAGCAAGCTAGATGCCCAACCAGAGCTTTTCATTCACATTAT
CCCTGATAAGACCAACAACTCATTGTCTATTATTGACAGTGGTATTGGCA
TGACTAAGGCTGATTTGGTGAACAACCTTGGTACAATTGCTAGGTCTGGG
ACCAAAGAGTTCATGGAGGCATTGGCTGCTGGGGCGGATGTGAGC
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