CN184582
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN184582 vs. ExPASy Swiss-Prot
Match: RND3_PONAB (Rho-related GTP-binding protein RhoE OS=Pongo abelii GN=RND3 PE=2 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 2.552e-29 Identity = 65/165 (39.39%), Postives = 101/165 (61.21%), Query Frame = 1 Query: 4 VGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVVAEGTTVNLGLWDTAGQEDYNRLRPLSYRGADVFVLAFSLVSRASYENVLKKWIPELQHYSPGVPVVLVGTKLDLREDKHYLAD--HPGLVPVTTAQGEELRKQIGAAYYIECSS-KTQQNVKAVFDAA 489 VGD GKT +L + + FP +Y+PTVF+N++A+ + + L LWDT+G Y+ +RPLSY +D ++ F + + ++VLKKW E+Q + P ++LVG K DLR D L + + PV+ QG + KQIGAA YIECS+ +++ +V+ +F A Sbjct: 29 VGDSQCGKTALLHVFAKDCFPENYVPTVFENYTASFEIDTQRIELSLWDTSGSPYYDNVRPLSYPDSDAVLICFDISRPETLDSVLKKWKGEIQEFCPNTKMLLVGCKSDLRTDVSTLVELSNHRQTPVSYDQGANMAKQIGAATYIECSALQSENSVRDIFHVA 193
BLAST of CN184582 vs. ExPASy Swiss-Prot
Match: RND3_MOUSE (Rho-related GTP-binding protein RhoE OS=Mus musculus GN=Rnd3 PE=1 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 2.552e-29 Identity = 65/165 (39.39%), Postives = 101/165 (61.21%), Query Frame = 1 Query: 4 VGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVVAEGTTVNLGLWDTAGQEDYNRLRPLSYRGADVFVLAFSLVSRASYENVLKKWIPELQHYSPGVPVVLVGTKLDLREDKHYLAD--HPGLVPVTTAQGEELRKQIGAAYYIECSS-KTQQNVKAVFDAA 489 VGD GKT +L + + FP +Y+PTVF+N++A+ + + L LWDT+G Y+ +RPLSY +D ++ F + + ++VLKKW E+Q + P ++LVG K DLR D L + + PV+ QG + KQIGAA YIECS+ +++ +V+ +F A Sbjct: 29 VGDSQCGKTALLHVFAKDCFPENYVPTVFENYTASFEIDTQRIELSLWDTSGSPYYDNVRPLSYPDSDAVLICFDISRPETLDSVLKKWKGEIQEFCPNTKMLLVGCKSDLRTDVSTLVELSNHRQTPVSYDQGANMAKQIGAATYIECSALQSENSVRDIFHVA 193
BLAST of CN184582 vs. ExPASy Swiss-Prot
Match: RND3_HUMAN (Rho-related GTP-binding protein RhoE OS=Homo sapiens GN=RND3 PE=1 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 2.552e-29 Identity = 65/165 (39.39%), Postives = 101/165 (61.21%), Query Frame = 1 Query: 4 VGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVVAEGTTVNLGLWDTAGQEDYNRLRPLSYRGADVFVLAFSLVSRASYENVLKKWIPELQHYSPGVPVVLVGTKLDLREDKHYLAD--HPGLVPVTTAQGEELRKQIGAAYYIECSS-KTQQNVKAVFDAA 489 VGD GKT +L + + FP +Y+PTVF+N++A+ + + L LWDT+G Y+ +RPLSY +D ++ F + + ++VLKKW E+Q + P ++LVG K DLR D L + + PV+ QG + KQIGAA YIECS+ +++ +V+ +F A Sbjct: 29 VGDSQCGKTALLHVFAKDCFPENYVPTVFENYTASFEIDTQRIELSLWDTSGSPYYDNVRPLSYPDSDAVLICFDISRPETLDSVLKKWKGEIQEFCPNTKMLLVGCKSDLRTDVSTLVELSNHRQTPVSYDQGANMAKQIGAATYIECSALQSENSVRDIFHVA 193
BLAST of CN184582 vs. ExPASy Swiss-Prot
Match: RHO3_ASHGO (GTP-binding protein RHO3 OS=Ashbya gossypii GN=RHO3 PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 3.333e-29 Identity = 71/182 (39.01%), Postives = 98/182 (53.85%), Query Frame = 1 Query: 4 VGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVVAEGTTVNLGLWDTAGQEDYNRLRPLSYRGADVFVLAFSLVSRASYENVLKKWIPELQHYSPGVPVVLVGTKLDLREDKHY---LADHPGLVP------------VTTAQGEELRKQIGAAYYIECSSKTQQNVKAVFDAAIKVVI 504 +GDGA GKT +L +T FP Y PTVF+N+ ++ + + L LWDTAGQE+++RLR LSY +L FS+ SR S ENV KW+ E+ + GV +VLV K DLR Y A PG + + +G + KQIGA Y+ECS+K + V F A + + Sbjct: 21 LGDGACGKTSLLNVFTRGYFPKVYEPTVFENYIHDIFVDNQHITLSLWDTAGQEEFDRLRSLSYSDTHTIMLCFSVDSRDSLENVKNKWVSEIADHCEGVKLVLVALKCDLRSSDEYGNESAITPGSIQNQKYNGGGGNGLIPYDEGLAMAKQIGALRYLECSAKMNRGVNEAFTEAARCAL 202
BLAST of CN184582 vs. ExPASy Swiss-Prot
Match: RND3_PIG (Rho-related GTP-binding protein RhoE OS=Sus scrofa GN=RND3 PE=2 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 5.685e-29 Identity = 64/165 (38.79%), Postives = 101/165 (61.21%), Query Frame = 1 Query: 4 VGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVVAEGTTVNLGLWDTAGQEDYNRLRPLSYRGADVFVLAFSLVSRASYENVLKKWIPELQHYSPGVPVVLVGTKLDLREDKHYLAD--HPGLVPVTTAQGEELRKQIGAAYYIECSS-KTQQNVKAVFDAA 489 VGD G+T +L + + FP +Y+PTVF+N++A+ + + L LWDT+G Y+ +RPLSY +D ++ F + + ++VLKKW E+Q + P ++LVG K DLR D L + + PV+ QG + KQIGAA YIECS+ +++ +V+ +F A Sbjct: 29 VGDSQCGRTALLHVFAKDCFPENYVPTVFENYTASFEIDTQRIELSLWDTSGSPYYDNVRPLSYPDSDAVLICFDISRPETLDSVLKKWKGEIQEFCPNTKMLLVGCKSDLRTDVSTLVELSNHRQTPVSYDQGANMAKQIGAATYIECSALQSENSVRDIFHVA 193
BLAST of CN184582 vs. ExPASy Swiss-Prot
Match: RHO3_SCHCO (GTP-binding protein Rho3 OS=Schizophyllum commune GN=RHO3 PE=2 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 3.685e-28 Identity = 71/161 (44.10%), Postives = 96/161 (59.63%), Query Frame = 1 Query: 7 GDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVVAEGTTVNLGLWDTAGQEDYNRLRPLSYRGADVFVLAFSLVSRASYENVLKKWIPELQHYSPGVPVVLVGTKLDLREDKHYLADHPGLVPVTTAQGEE---LRKQIGAAYYIECSSKTQQNVKAVF 480 GDGA GKT +L +T F Y PTVF+N+ ++ + V L LWDTAGQE+++RLR LSY V ++ FS+ + S ENV KW+ E+ Y PGV +VLV +K DLR+D L D T Q EE + ++I A+ Y+ECSSK + V VF Sbjct: 24 GDGACGKTSLLNVFTRGFFTQVYEPTVFENYVHDLYIDDQLVELSLWDTAGQEEFDRLRSLSYAETHVIMICFSVDNPTSLENVESKWLDEILEYCPGVKLVLVDSKCDLRDDPAVL-DRLQRYGTHTDQYEEGLGVARRIRASRYLECSSKHNRGVNEVF 183
BLAST of CN184582 vs. ExPASy Swiss-Prot
Match: RHO3_YEAST (GTP-binding protein RHO3 OS=Saccharomyces cerevisiae GN=RHO3 PE=1 SV=2) HSP 1 Score: 122.865 bits (307), Expect = 1.072e-27 Identity = 70/190 (36.84%), Postives = 100/190 (52.63%), Query Frame = 1 Query: 4 VGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVVAEGTTVNLGLWDTAGQEDYNRLRPLSYRGADVFVLAFSLVSRASYENVLKKWIPELQHYSPGVPVVLVGTKLDLR---------------EDKHYLADHPGLVPVTT--------AQGEELRKQIGAAYYIECSSKTQQNVKAVFDAAIKVVI 504 +GDGA GKT +L +T FP Y PTVF+N+ ++ + + L LWDTAGQE+++RLR LSY +L FS+ SR S ENV KW+ E+ + GV +VLV K DLR +D D+ + T+ +G + K+IGA Y+ECS+K + V F A +V + Sbjct: 22 LGDGACGKTSLLNVFTRGYFPEVYEPTVFENYIHDIFVDSKHITLSLWDTAGQEEFDRLRSLSYSDTQCIMLCFSIDSRDSLENVQNKWVGEITDHCEGVKLVLVALKCDLRNNENESNAITPNNIQQDNSVSNDNGNNINSTSNGKNLISYEEGLAMAKKIGALRYLECSAKLNKGVNEAFTEAARVAL 211
BLAST of CN184582 vs. ExPASy Swiss-Prot
Match: RACN_DICDI (Rho-related protein racN OS=Dictyostelium discoideum GN=racN PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 4.504e-26 Identity = 63/160 (39.38%), Postives = 92/160 (57.50%), Query Frame = 1 Query: 4 VGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVVAEGTTVNLGLWDTAGQEDYNRLRPLSYRGADVFVLAFSLVSRASYENVLKKWIPELQHYSPGVPVVLVGTKLDLREDKHYLADHPGLVPVTTAQGEELRKQIGAAYYIECSSKTQQNVKAVFD 483 +GD +GKT +L+ FP +YIPT+FDN + + +G WDT G E+Y R PLSY ++F++ FS+ SR S+ N W+PE+ + P VP++LVGTK DLR Y VT +G E++ +I A+ Y+ECSS + V +FD Sbjct: 11 LGDVTIGKTSLLVTKKIG-FPLEYIPTIFDNHYFEIKINDQIMRIGCWDTGGGEEYPR--PLSYPQTNLFLILFSISSRNSFNNCETYWLPEVTKFLPSVPIILVGTKTDLRNCDDY---KDKSTFVTYEEGLEMKDKINASAYLECSSLLNKGVDDLFD 164
BLAST of CN184582 vs. ExPASy Swiss-Prot
Match: RND1_BOVIN (Rho-related GTP-binding protein Rho6 OS=Bos taurus GN=RND1 PE=2 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 5.883e-26 Identity = 63/170 (37.06%), Postives = 96/170 (56.47%), Query Frame = 1 Query: 4 VGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVVAEGTTVNLGLWDTAGQEDYNRLRPLSYRGADVFVLAFSLVSRASYENVLKKWIPELQHYSPGVPVVLVGTKLDLREDKHYLAD--HPGLVPVTTAQGEELRKQIGAAYYIECSSKT-QQNVKAVFDAAIKVVI 504 VGD GKT ML + +P Y+PTVF+N++A + E V L LWDT+G Y+ +RPL Y +D +L F + + ++ LKKW E+ Y P V+L+G K DLR D L + H P++ QG + KQ+GA Y+E S+ T ++++ ++F A V + Sbjct: 19 VGDVQCGKTAMLQVLAKDCYPETYVPTVFENYTACLETEEQRVELSLWDTSGSPYYDNVRPLCYSDSDAVLLCFDISRPETVDSALKKWRTEILDYCPSTRVLLIGCKTDLRTDLSTLMELSHQKQAPISYEQGCAIAKQLGAEIYLEGSAFTSEKSIHSIFRTASMVCL 188
BLAST of CN184582 vs. ExPASy Swiss-Prot
Match: RND1_MOUSE (Rho-related GTP-binding protein Rho6 OS=Mus musculus GN=Rnd1 PE=2 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 7.683e-26 Identity = 63/170 (37.06%), Postives = 95/170 (55.88%), Query Frame = 1 Query: 4 VGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVVAEGTTVNLGLWDTAGQEDYNRLRPLSYRGADVFVLAFSLVSRASYENVLKKWIPELQHYSPGVPVVLVGTKLDLREDKHYLAD--HPGLVPVTTAQGEELRKQIGAAYYIECSSKTQQ-NVKAVFDAAIKVVI 504 VGD GKT ML + +P Y+PTVF+N++A + E V L LWDT+G Y+ +RPL Y +D +L F + + ++ LKKW E+ Y P V+L+G K DLR D L + H P++ QG + KQ+GA Y+E S+ T + ++ ++F A V + Sbjct: 19 VGDVQCGKTAMLQVLAKDCYPETYVPTVFENYTACLETEEQRVELSLWDTSGSPYYDNVRPLCYSDSDAVLLCFDISRPETMDSALKKWRTEILDYCPSTRVLLIGCKTDLRTDLSTLMELSHQKQAPISYEQGCAIAKQLGAEIYLEGSAFTSETSIHSIFRTASMVCL 188 The following BLAST results are available for this feature:
BLAST of CN184582 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN184582 ID=CN184582; Name=CN184582; organism=Citrus sinensis; type=EST; length=555bpback to top |