CN184582

Overview
NameCN184582
Unique NameCN184582
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length555
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN184582 vs. ExPASy Swiss-Prot
Match: RAC9_GOSHI (Rac-like GTP-binding protein RAC9 OS=Gossypium hirsutum GN=RAC9 PE=2 SV=1)

HSP 1 Score: 293.123 bits (749), Expect = 5.989e-79
Identity = 137/168 (81.55%), Postives = 155/168 (92.26%), Query Frame = 1
Query:    1 TVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVVAEGTTVNLGLWDTAGQEDYNRLRPLSYRGADVFVLAFSLVSRASYENVLKKWIPELQHYSPGVPVVLVGTKLDLREDKHYLADHPGLVPVTTAQGEELRKQIGAAYYIECSSKTQQNVKAVFDAAIKVVI 504
            TVGDGAVGKTCMLI YTSN FPTDY+PTVFDNFSANVV +G+TVNLGLWDTAGQEDYNRLRPLSYRGADVF+LAFSL+SRASYENV KKWIPEL+HY+P VP+VLVGTKLDLR+DK +L+D+PG + +TT+QGEEL+K IGA  YIECSSKTQQNVKAVFD AIK+ +
Sbjct:   11 TVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISRASYENVHKKWIPELRHYAPNVPIVLVGTKLDLRDDKQFLSDNPGAISITTSQGEELKKMIGAVTYIECSSKTQQNVKAVFDVAIKIAL 178          
BLAST of CN184582 vs. ExPASy Swiss-Prot
Match: RAC7_ARATH (Rac-like GTP-binding protein ARAC7 OS=Arabidopsis thaliana GN=ARAC7 PE=1 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 1.475e-77
Identity = 139/168 (82.74%), Postives = 154/168 (91.67%), Query Frame = 1
Query:    1 TVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVVAEGTTVNLGLWDTAGQEDYNRLRPLSYRGADVFVLAFSLVSRASYENVLKKWIPELQHYSPGVPVVLVGTKLDLREDKHYLADHPGLVPVTTAQGEELRKQIGAAYYIECSSKTQQNVKAVFDAAIKVVI 504
            TVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANV  +G  VNLGLWDTAGQEDY+RLRPLSYRGAD+FVLAFSL+S+ASYENVLKKW+PEL+ ++P VP+VLVGTKLDLR+DK YLADH  +  +T+ QGEELRKQIGAA YIECSSKTQQNVKAVFD AIKVV+
Sbjct:   11 TVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVAVDGQIVNLGLWDTAGQEDYSRLRPLSYRGADIFVLAFSLISKASYENVLKKWMPELRRFAPNVPIVLVGTKLDLRDDKGYLADHTNV--ITSTQGEELRKQIGAAAYIECSSKTQQNVKAVFDTAIKVVL 176          
BLAST of CN184582 vs. ExPASy Swiss-Prot
Match: RAC1_ORYSJ (Rac-like GTP-binding protein 1 OS=Oryza sativa subsp. japonica GN=RAC1 PE=1 SV=1)

HSP 1 Score: 287.345 bits (734), Expect = 3.287e-77
Identity = 137/168 (81.55%), Postives = 152/168 (90.48%), Query Frame = 1
Query:    1 TVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVVAEGTTVNLGLWDTAGQEDYNRLRPLSYRGADVFVLAFSLVSRASYENVLKKWIPELQHYSPGVPVVLVGTKLDLREDKHYLADHPGLVPVTTAQGEELRKQIGAAYYIECSSKTQQNVKAVFDAAIKVVI 504
            TVGDGAVGKTCMLICYT NKFPTDYIPTVFDNFSANV  +G+ VNLGLWDTAGQEDY+RLRPLSYRGADVF+L+FSL+SRASYENV KKW+PEL+ ++PGVPVVLVGTKLDLRED+ YLADHP    +TT QGEELRK IGA  YIECSSKTQ+N+KAVFD AIKVV+
Sbjct:   15 TVGDGAVGKTCMLICYTCNKFPTDYIPTVFDNFSANVSVDGSVVNLGLWDTAGQEDYSRLRPLSYRGADVFILSFSLISRASYENVQKKWMPELRRFAPGVPVVLVGTKLDLREDRAYLADHPASSIITTEQGEELRKLIGAVAYIECSSKTQRNIKAVFDTAIKVVL 182          
BLAST of CN184582 vs. ExPASy Swiss-Prot
Match: RAC9_ARATH (Rac-like GTP-binding protein ARAC9 OS=Arabidopsis thaliana GN=ARAC9 PE=1 SV=1)

HSP 1 Score: 263.462 bits (672), Expect = 5.082e-70
Identity = 122/168 (72.62%), Postives = 145/168 (86.31%), Query Frame = 1
Query:    1 TVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVVAEGTTVNLGLWDTAGQEDYNRLRPLSYRGADVFVLAFSLVSRASYENVLKKWIPELQHYSPGVPVVLVGTKLDLREDKHYLADHPGLVPVTTAQGEELRKQIGAAYYIECSSKTQQNVKAVFDAAIKVVI 504
            TVGDGAVGKTC+LI YTSN FPTDY+PTVFDNF+ANV+ +G TVNLGLWDTAGQEDYNR+RPLSYRGADVF+LAFSL+SR S+EN+ KKW+PEL+HY+P VP+VLVGTK DLR++  +  ++PG   +   QG+ELRK+IGA  YIECSSK Q NVKAVFD AIKVV+
Sbjct:   23 TVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFNANVLVDGKTVNLGLWDTAGQEDYNRVRPLSYRGADVFILAFSLISRPSFENIAKKWVPELRHYAPTVPIVLVGTKSDLRDNMQFPKNYPGACTIFPEQGQELRKEIGALAYIECSSKAQMNVKAVFDEAIKVVL 190          
BLAST of CN184582 vs. ExPASy Swiss-Prot
Match: RAC1_RAT (Ras-related C3 botulinum toxin substrate 1 OS=Rattus norvegicus GN=Rac1 PE=1 SV=1)

HSP 1 Score: 218.009 bits (554), Expect = 2.449e-56
Identity = 104/169 (61.54%), Postives = 130/169 (76.92%), Query Frame = 1
Query:    4 VGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVVAEGTTVNLGLWDTAGQEDYNRLRPLSYRGADVFVLAFSLVSRASYENVLKKWIPELQHYSPGVPVVLVGTKLDLREDKHYL--ADHPGLVPVTTAQGEELRKQIGAAYYIECSSKTQQNVKAVFDAAIKVVI 504
            VGDGAVGKTC+LI YT+N FP +YIPTVFDN+SANV+ +G  VNLGLWDTAGQEDY+RLRPLSY   DVF++ FSLVS AS+ENV  KW PE++H+ P  P++LVGTKLDLR+DK  +       L P+T  QG  + K+IGA  Y+ECS+ TQ+ +K VFD AI+ V+
Sbjct:    9 VGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAGQEDYDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVRHHCPNTPIILVGTKLDLRDDKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALTQRGLKTVFDEAIRAVL 177          
BLAST of CN184582 vs. ExPASy Swiss-Prot
Match: RAC1_MOUSE (Ras-related C3 botulinum toxin substrate 1 OS=Mus musculus GN=Rac1 PE=1 SV=1)

HSP 1 Score: 218.009 bits (554), Expect = 2.449e-56
Identity = 104/169 (61.54%), Postives = 130/169 (76.92%), Query Frame = 1
Query:    4 VGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVVAEGTTVNLGLWDTAGQEDYNRLRPLSYRGADVFVLAFSLVSRASYENVLKKWIPELQHYSPGVPVVLVGTKLDLREDKHYL--ADHPGLVPVTTAQGEELRKQIGAAYYIECSSKTQQNVKAVFDAAIKVVI 504
            VGDGAVGKTC+LI YT+N FP +YIPTVFDN+SANV+ +G  VNLGLWDTAGQEDY+RLRPLSY   DVF++ FSLVS AS+ENV  KW PE++H+ P  P++LVGTKLDLR+DK  +       L P+T  QG  + K+IGA  Y+ECS+ TQ+ +K VFD AI+ V+
Sbjct:    9 VGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAGQEDYDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVRHHCPNTPIILVGTKLDLRDDKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALTQRGLKTVFDEAIRAVL 177          
BLAST of CN184582 vs. ExPASy Swiss-Prot
Match: RAC1_HUMAN (Ras-related C3 botulinum toxin substrate 1 OS=Homo sapiens GN=RAC1 PE=1 SV=1)

HSP 1 Score: 218.009 bits (554), Expect = 2.449e-56
Identity = 104/169 (61.54%), Postives = 130/169 (76.92%), Query Frame = 1
Query:    4 VGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVVAEGTTVNLGLWDTAGQEDYNRLRPLSYRGADVFVLAFSLVSRASYENVLKKWIPELQHYSPGVPVVLVGTKLDLREDKHYL--ADHPGLVPVTTAQGEELRKQIGAAYYIECSSKTQQNVKAVFDAAIKVVI 504
            VGDGAVGKTC+LI YT+N FP +YIPTVFDN+SANV+ +G  VNLGLWDTAGQEDY+RLRPLSY   DVF++ FSLVS AS+ENV  KW PE++H+ P  P++LVGTKLDLR+DK  +       L P+T  QG  + K+IGA  Y+ECS+ TQ+ +K VFD AI+ V+
Sbjct:    9 VGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAGQEDYDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVRHHCPNTPIILVGTKLDLRDDKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALTQRGLKTVFDEAIRAVL 177          
BLAST of CN184582 vs. ExPASy Swiss-Prot
Match: RAC1_CANFA (Ras-related C3 botulinum toxin substrate 1 OS=Canis familiaris GN=RAC1 PE=2 SV=1)

HSP 1 Score: 218.009 bits (554), Expect = 2.449e-56
Identity = 104/169 (61.54%), Postives = 130/169 (76.92%), Query Frame = 1
Query:    4 VGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVVAEGTTVNLGLWDTAGQEDYNRLRPLSYRGADVFVLAFSLVSRASYENVLKKWIPELQHYSPGVPVVLVGTKLDLREDKHYL--ADHPGLVPVTTAQGEELRKQIGAAYYIECSSKTQQNVKAVFDAAIKVVI 504
            VGDGAVGKTC+LI YT+N FP +YIPTVFDN+SANV+ +G  VNLGLWDTAGQEDY+RLRPLSY   DVF++ FSLVS AS+ENV  KW PE++H+ P  P++LVGTKLDLR+DK  +       L P+T  QG  + K+IGA  Y+ECS+ TQ+ +K VFD AI+ V+
Sbjct:    9 VGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAGQEDYDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVRHHCPNTPIILVGTKLDLRDDKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALTQRGLKTVFDEAIRAVL 177          
BLAST of CN184582 vs. ExPASy Swiss-Prot
Match: RAC1_BOVIN (Ras-related C3 botulinum toxin substrate 1 OS=Bos taurus GN=RAC1 PE=1 SV=1)

HSP 1 Score: 218.009 bits (554), Expect = 2.449e-56
Identity = 104/169 (61.54%), Postives = 130/169 (76.92%), Query Frame = 1
Query:    4 VGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVVAEGTTVNLGLWDTAGQEDYNRLRPLSYRGADVFVLAFSLVSRASYENVLKKWIPELQHYSPGVPVVLVGTKLDLREDKHYL--ADHPGLVPVTTAQGEELRKQIGAAYYIECSSKTQQNVKAVFDAAIKVVI 504
            VGDGAVGKTC+LI YT+N FP +YIPTVFDN+SANV+ +G  VNLGLWDTAGQEDY+RLRPLSY   DVF++ FSLVS AS+ENV  KW PE++H+ P  P++LVGTKLDLR+DK  +       L P+T  QG  + K+IGA  Y+ECS+ TQ+ +K VFD AI+ V+
Sbjct:    9 VGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAGQEDYDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVRHHCPNTPIILVGTKLDLRDDKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALTQRGLKTVFDEAIRAVL 177          
BLAST of CN184582 vs. ExPASy Swiss-Prot
Match: RAC2_HUMAN (Ras-related C3 botulinum toxin substrate 2 OS=Homo sapiens GN=RAC2 PE=1 SV=1)

HSP 1 Score: 214.542 bits (545), Expect = 2.707e-55
Identity = 103/169 (60.95%), Postives = 128/169 (75.74%), Query Frame = 1
Query:    4 VGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVVAEGTTVNLGLWDTAGQEDYNRLRPLSYRGADVFVLAFSLVSRASYENVLKKWIPELQHYSPGVPVVLVGTKLDLREDKHYL--ADHPGLVPVTTAQGEELRKQIGAAYYIECSSKTQQNVKAVFDAAIKVVI 504
            VGDGAVGKTC+LI YT+N FP +YIPTVFDN+SANV+ +   VNLGLWDTAGQEDY+RLRPLSY   DVF++ FSLVS ASYENV  KW PE++H+ P  P++LVGTKLDLR+DK  +       L P+T  QG  L K+I +  Y+ECS+ TQ+ +K VFD AI+ V+
Sbjct:    9 VGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDSKPVNLGLWDTAGQEDYDRLRPLSYPQTDVFLICFSLVSPASYENVRAKWFPEVRHHCPSTPIILVGTKLDLRDDKDTIEKLKEKKLAPITYPQGLALAKEIDSVKYLECSALTQRGLKTVFDEAIRAVL 177          
The following BLAST results are available for this feature:
BLAST of CN184582 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RAC9_GOSHI5.989e-7981.55Rac-like GTP-binding protein RAC9 OS=Gossypium hir... [more]
RAC7_ARATH1.475e-7782.74Rac-like GTP-binding protein ARAC7 OS=Arabidopsis ... [more]
RAC1_ORYSJ3.287e-7781.55Rac-like GTP-binding protein 1 OS=Oryza sativa sub... [more]
RAC9_ARATH5.082e-7072.62Rac-like GTP-binding protein ARAC9 OS=Arabidopsis ... [more]
RAC1_RAT2.449e-5661.54Ras-related C3 botulinum toxin substrate 1 OS=Ratt... [more]
RAC1_MOUSE2.449e-5661.54Ras-related C3 botulinum toxin substrate 1 OS=Mus ... [more]
RAC1_HUMAN2.449e-5661.54Ras-related C3 botulinum toxin substrate 1 OS=Homo... [more]
RAC1_CANFA2.449e-5661.54Ras-related C3 botulinum toxin substrate 1 OS=Cani... [more]
RAC1_BOVIN2.449e-5661.54Ras-related C3 botulinum toxin substrate 1 OS=Bos ... [more]
RAC2_HUMAN2.707e-5560.95Ras-related C3 botulinum toxin substrate 2 OS=Homo... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0005L21_f Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0005L21, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184582 ID=CN184582; Name=CN184582; organism=Citrus sinensis; type=EST; length=555bp
ACAGTTGGTGATGGGGCTGTTGGCAAAACTTGCATGCTTATTTGCTACAC
AAGTAACAAGTTTCCTACTGATTATATACCAACGGTGTTCGACAACTTCA
GTGCAAATGTGGTAGCTGAAGGCACTACTGTCAACTTAGGCCTCTGGGAC
ACAGCTGGGCAAGAGGATTACAATAGATTAAGGCCTTTGAGCTACAGAGG
GGCAGACGTTTTTGTCTTAGCTTTCTCATTAGTCAGTCGAGCCAGCTATG
AAAACGTTCTAAAAAAGTGGATCCCTGAACTTCAGCATTACTCTCCCGGA
GTACCAGTTGTATTGGTTGGCACCAAATTGGATCTTCGAGAGGATAAGCA
TTATTTGGCTGATCATCCAGGATTGGTGCCTGTGACCACTGCACAAGGAG
AGGAACTCCGTAAACAGATTGGTGCTGCATATTACATTGAATGCAGCTCG
AAAACTCAGCAGAATGTAAAAGCAGTTTTTGATGCTGCAATCAAGGTAGT
TATCAAACCCCCGCAGAAGCAAAAGGAGAAGAAGAAAAAACAACCGAGGA
TGCCT
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