CN184582
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN184582 vs. ExPASy Swiss-Prot
Match: RHOC_MOUSE (Rho-related GTP-binding protein RhoC OS=Mus musculus GN=Rhoc PE=1 SV=2) HSP 1 Score: 174.866 bits (442), Expect = 2.377e-43 Identity = 80/166 (48.19%), Postives = 118/166 (71.08%), Query Frame = 1 Query: 4 VGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVVAEGTTVNLGLWDTAGQEDYNRLRPLSYRGADVFVLAFSLVSRASYENVLKKWIPELQHYSPGVPVVLVGTKLDLREDKHYLADHPGL--VPVTTAQGEELRKQIGAAYYIECSSKTQQNVKAVFDAAIK 495 VGDGA GKTC+LI ++ ++FP Y+PTVF+N+ A++ +G V L LWDTAGQEDY+RLRPLSY DV ++ FS+ S S EN+ +KW PE++H+ P VP++LVG K DLR+D+H + + PV + +G ++ +I A Y+ECS+KT++ V+ VF+ A + Sbjct: 11 VGDGACGKTCLLIVFSKDQFPEVYVPTVFENYIADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRQDEHTRRELAKMKQEPVRSEEGRDMANRISAFGYLECSAKTKEGVREVFEMATR 176
BLAST of CN184582 vs. ExPASy Swiss-Prot
Match: RHOC_HUMAN (Rho-related GTP-binding protein RhoC OS=Homo sapiens GN=RHOC PE=1 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 2.377e-43 Identity = 80/166 (48.19%), Postives = 118/166 (71.08%), Query Frame = 1 Query: 4 VGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVVAEGTTVNLGLWDTAGQEDYNRLRPLSYRGADVFVLAFSLVSRASYENVLKKWIPELQHYSPGVPVVLVGTKLDLREDKHYLADHPGL--VPVTTAQGEELRKQIGAAYYIECSSKTQQNVKAVFDAAIK 495 VGDGA GKTC+LI ++ ++FP Y+PTVF+N+ A++ +G V L LWDTAGQEDY+RLRPLSY DV ++ FS+ S S EN+ +KW PE++H+ P VP++LVG K DLR+D+H + + PV + +G ++ +I A Y+ECS+KT++ V+ VF+ A + Sbjct: 11 VGDGACGKTCLLIVFSKDQFPEVYVPTVFENYIADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRQDEHTRRELAKMKQEPVRSEEGRDMANRISAFGYLECSAKTKEGVREVFEMATR 176
BLAST of CN184582 vs. ExPASy Swiss-Prot
Match: RHOC_BOVIN (Rho-related GTP-binding protein RhoC OS=Bos taurus GN=RHOC PE=2 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 2.377e-43 Identity = 80/166 (48.19%), Postives = 118/166 (71.08%), Query Frame = 1 Query: 4 VGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVVAEGTTVNLGLWDTAGQEDYNRLRPLSYRGADVFVLAFSLVSRASYENVLKKWIPELQHYSPGVPVVLVGTKLDLREDKHYLADHPGL--VPVTTAQGEELRKQIGAAYYIECSSKTQQNVKAVFDAAIK 495 VGDGA GKTC+LI ++ ++FP Y+PTVF+N+ A++ +G V L LWDTAGQEDY+RLRPLSY DV ++ FS+ S S EN+ +KW PE++H+ P VP++LVG K DLR+D+H + + PV + +G ++ +I A Y+ECS+KT++ V+ VF+ A + Sbjct: 11 VGDGACGKTCLLIVFSKDQFPEVYVPTVFENYIADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRQDEHTRRELAKMKQEPVRSEEGRDMANRISAFGYLECSAKTKEGVREVFEMATR 176
BLAST of CN184582 vs. ExPASy Swiss-Prot
Match: RHOA_EMENI (GTP-binding protein rhoA OS=Emericella nidulans GN=rhoA PE=3 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 2.377e-43 Identity = 84/169 (49.70%), Postives = 117/169 (69.23%), Query Frame = 1 Query: 4 VGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVVAEGTTVNLGLWDTAGQEDYNRLRPLSYRGADVFVLAFSLVSRASYENVLKKWIPELQHYSPGVPVVLVGTKLDLREDKHYLAD--HPGLVPVTTAQGEELRKQIGAAYYIECSSKTQQNVKAVFDAAIKVVI 504 VGDGA GKTC+LI ++ FP Y+PTVF+N+ A+V +G V L LWDTAGQEDY+RLRPLSY + V ++ F++ S S +NV +KWI E+ H+ G+P++LVG K DLR D + + PVT QGEE+RK+IGA Y+ECS++T + V+ VF+AA + + Sbjct: 11 VGDGACGKTCLLIVFSKGTFPEVYVPTVFENYVADVEVDGKHVELALWDTAGQEDYDRLRPLSYPDSHVILICFAVDSPDSLDNVQEKWISEVLHFCQGLPIILVGCKKDLRHDPKTIEELNKTSQKPVTPEQGEEVRKKIGAYKYLECSARTNEGVREVFEAATRAAL 179
BLAST of CN184582 vs. ExPASy Swiss-Prot
Match: RHO1_ASHGO (GTP-binding protein RHO1 OS=Ashbya gossypii GN=RHO1 PE=3 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 2.377e-43 Identity = 86/166 (51.81%), Postives = 114/166 (68.67%), Query Frame = 1 Query: 4 VGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVVAEGTTVNLGLWDTAGQEDYNRLRPLSYRGADVFVLAFSLVSRASYENVLKKWIPELQHYSPGVPVVLVGTKLDLREDKHYLAD--HPGLVPVTTAQGEELRKQIGAAYYIECSSKTQQNVKAVFDAAIK 495 VGDGA GKTC+LI + KFP Y+PTVFDN+ A+V +G V L LWDTAGQEDY+RLRPLSY ++V ++ +S+ S ENV++KWI E+ ++ GVP++LVG K DLR D + G PV+ AQ +E+ QIGA YIECS+KT V+ VF+AA + Sbjct: 17 VGDGACGKTCLLIVFAKGKFPQVYVPTVFDNYVADVEVDGRRVELALWDTAGQEDYDRLRPLSYPDSNVVLICYSIDLPDSLENVMEKWISEVLYFCQGVPIILVGCKADLRNDPQVIEQLRQQGQQPVSQAQAQEVADQIGAVEYIECSAKTGFGVREVFEAATR 182
BLAST of CN184582 vs. ExPASy Swiss-Prot
Match: RHO1_CAEEL (Ras-like GTP-binding protein rhoA OS=Caenorhabditis elegans GN=rho-1 PE=2 SV=1) HSP 1 Score: 174.481 bits (441), Expect = 3.105e-43 Identity = 81/169 (47.93%), Postives = 116/169 (68.64%), Query Frame = 1 Query: 4 VGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVVAEGTTVNLGLWDTAGQEDYNRLRPLSYRGADVFVLAFSLVSRASYENVLKKWIPELQHYSPGVPVVLVGTKLDLREDKHYLADHPGL--VPVTTAQGEELRKQIGAAYYIECSSKTQQNVKAVFDAAIKVVI 504 VGDGA GKTC+LI ++ ++FP Y+PTVF+N+ A++ +G V L LWDTAGQEDY+RLRPLSY DV ++ FS+ S S EN+ +KW PE++H+ P VP++LVG K DLR D + + + PV QG + +QIGA Y+ECS+KT+ ++ VF+ A + + Sbjct: 11 VGDGACGKTCLLIVFSKDQFPDVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVRHFCPNVPIILVGNKRDLRSDPQTVRELAKMKQEPVKPEQGRAIAEQIGAFAYLECSAKTKDGIREVFEKATQAAL 179
BLAST of CN184582 vs. ExPASy Swiss-Prot
Match: RHOC_CHICK (Rho-related GTP-binding protein RhoC OS=Gallus gallus GN=RHOC PE=1 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 6.917e-43 Identity = 80/166 (48.19%), Postives = 116/166 (69.88%), Query Frame = 1 Query: 4 VGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVVAEGTTVNLGLWDTAGQEDYNRLRPLSYRGADVFVLAFSLVSRASYENVLKKWIPELQHYSPGVPVVLVGTKLDLREDKHYLADHPGL--VPVTTAQGEELRKQIGAAYYIECSSKTQQNVKAVFDAAIK 495 VGDGA GKTC+LI ++ ++FP Y+PTVF+N+ A++ +G V L LWDTAGQEDY+RLRPLSY DV ++ FS+ S S EN+ +KW PE++H+ P VP++LVG K DLR D+H + + PV +G ++ +I A Y+ECS+KT++ V+ VF+ A + Sbjct: 11 VGDGACGKTCLLIVFSKDQFPEVYVPTVFENYIADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDEHTRRELAKMKQEPVKPEEGRDMANRINAFGYLECSAKTKEGVREVFEMATR 176
BLAST of CN184582 vs. ExPASy Swiss-Prot
Match: RHOU_HUMAN (Rho-related GTP-binding protein RhoU OS=Homo sapiens GN=RHOU PE=1 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 1.180e-42 Identity = 86/165 (52.12%), Postives = 118/165 (71.52%), Query Frame = 1 Query: 4 VGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVVAEGTTVNLGLWDTAGQEDYNRLRPLSYRGADVFVLAFSLVSRASYENVLKKWIPELQHYSPGVPVVLVGTKLDLREDKHYL--ADHPGLVPVTTAQGEELRKQIGAAYYIECSSKTQQNVKAVFDAAI 492 VGDGAVGKT +++ YT+N +PT+YIPT FDNFSA V +G V L L DTAGQ+++++LRPL Y D+F+L FS+VS +S++NV +KW+PE++ + P P++LVGT+ DLRED L D PV + ++I AA YIECS+ TQ+N+K VFDAAI Sbjct: 55 VGDGAVGKTSLVVSYTTNGYPTEYIPTAFDNFSAVVSVDGRPVRLQLCDTAGQDEFDKLRPLCYTNTDIFLLCFSVVSPSSFQNVSEKWVPEIRCHCPKAPIILVGTQSDLREDVKVLIELDKCKEKPVPEEAAKLCAEEIKAASYIECSALTQKNLKEVFDAAI 219
BLAST of CN184582 vs. ExPASy Swiss-Prot
Match: RHOB_RAT (Rho-related GTP-binding protein RhoB OS=Rattus norvegicus GN=Rhob PE=1 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 1.180e-42 Identity = 80/169 (47.34%), Postives = 116/169 (68.64%), Query Frame = 1 Query: 4 VGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVVAEGTTVNLGLWDTAGQEDYNRLRPLSYRGADVFVLAFSLVSRASYENVLKKWIPELQHYSPGVPVVLVGTKLDLREDKHYLADHPGL--VPVTTAQGEELRKQIGAAYYIECSSKTQQNVKAVFDAAIKVVI 504 VGDGA GKTC+LI ++ ++FP Y+PTVF+N+ A++ +G V L LWDTAGQEDY+RLRPLSY DV ++ FS+ S S EN+ +KW+PE++H+ P VP++LV K DLR D+H + + PV T G + +I A Y+ECS+KT++ V+ VF+ A + + Sbjct: 11 VGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPNVPIILVANKKDLRSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAAL 179
BLAST of CN184582 vs. ExPASy Swiss-Prot
Match: RHOB_MOUSE (Rho-related GTP-binding protein RhoB OS=Mus musculus GN=Rhob PE=1 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 1.180e-42 Identity = 80/169 (47.34%), Postives = 116/169 (68.64%), Query Frame = 1 Query: 4 VGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVVAEGTTVNLGLWDTAGQEDYNRLRPLSYRGADVFVLAFSLVSRASYENVLKKWIPELQHYSPGVPVVLVGTKLDLREDKHYLADHPGL--VPVTTAQGEELRKQIGAAYYIECSSKTQQNVKAVFDAAIKVVI 504 VGDGA GKTC+LI ++ ++FP Y+PTVF+N+ A++ +G V L LWDTAGQEDY+RLRPLSY DV ++ FS+ S S EN+ +KW+PE++H+ P VP++LV K DLR D+H + + PV T G + +I A Y+ECS+KT++ V+ VF+ A + + Sbjct: 11 VGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPNVPIILVANKKDLRSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAAL 179 The following BLAST results are available for this feature:
BLAST of CN184582 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN184582 ID=CN184582; Name=CN184582; organism=Citrus sinensis; type=EST; length=555bpback to top |