CN184579

Overview
NameCN184579
Unique NameCN184579
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length664
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3990 contig Csv1_Contig3990:181..844. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_TRIEI (Chaperone protein dnaJ OS=Trichodesmium erythraeum (strain IMS101) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 4.537e-32
Identity = 76/150 (50.67%), Postives = 94/150 (62.67%), Query Frame = 3
Query:  222 DYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNKEPNAEQHLKEISNAYEVLSDDEKRSLNDKFGEAGLK-GAGMGMG-DFSNPF-DLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            DYY +LGVSR+A K E+K AYR+LAR YHPDVNKEP +E+  KEI+ AYE+LSD E ++  D+FGEAG+  GA  G   DFS+ F D+FES F G                   V G D    L + F EA+FG +KE+ I  LETCGTC
Sbjct:    4 DYYEILGVSRSADKEELKRAYRRLARKYHPDVNKEPGSEERFKEINRAYEILSDPEMKARFDRFGEAGVSGGAASGFSTDFSDSFADIFESFFSG-----FGGAGTQGRRRTGPVRGDDLRLDLNLEFIEAIFGGDKELTIKHLETCGTC 148          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_SYNJB (Chaperone protein dnaJ OS=Synechococcus sp. GN=dnaJ PE=3 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 4.537e-32
Identity = 75/156 (48.08%), Postives = 94/156 (60.26%), Query Frame = 3
Query:  222 DYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNKEPNAEQHLKEISNAYEVLSDDEKRSLNDKFGEAGLKGAG---------MGMGDFSNPFDLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            DYY +LGVSR++SK EIK AYR+LAR YHPDVNKEP AE+  KEI+ AYEVLSD+E ++  D+FGEAGL GA           GMG F++ F+ F + F G                   V G D  + L + F EA+FG EK+I I+ LE C  C
Sbjct:    4 DYYEILGVSRDSSKEEIKRAYRRLARKYHPDVNKEPGAEERFKEINRAYEVLSDNELKARYDRFGEAGLSGAAAAASGFQDFAGMGGFADIFESFFTNFAGA-------GASYARSRQGPVRGDDLRFDLKLEFLEAIFGGEKQIRISHLEVCNVC 152          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_CYAP7 (Chaperone protein dnaJ OS=Cyanothece sp. (strain PCC 7424) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 5.926e-32
Identity = 74/150 (49.33%), Postives = 91/150 (60.67%), Query Frame = 3
Query:  222 DYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNKEPNAEQHLKEISNAYEVLSDDEKRSLNDKFGEAGLK---GAGMGMGDFSNPFDLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            DYY +LGVSR+A+K EIK AYR+LAR YHPDVNKE  AE+  KEI+ AYE+LS+ E R+  D+FGEAG+    G+G   GD     D+FE++F G                   V G D      +NF+EAVFG EKEI I  LETC  C
Sbjct:    4 DYYEILGVSRDANKDEIKRAYRRLARKYHPDVNKEIGAEERFKEINRAYEILSEPETRARYDRFGEAGVSSGAGSGFEYGDMGGIADIFETIFSG---FGGMGTGTSSRRRTGPVRGDDLRLDFKLNFREAVFGGEKEIRIRHLETCQVC 150          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_ROSCS (Chaperone protein dnaJ OS=Roseiflexus castenholzii (strain DSM 13941 / HLO8) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.011e-31
Identity = 77/149 (51.68%), Postives = 93/149 (62.42%), Query Frame = 3
Query:  222 DYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNKEPNAEQHLKEISNAYEVLSDDEKRSLNDKFGEAGLKGA-GMGMGDFSNPF-DLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            DYY VLGV RNAS+ EIK A+R+LAR YHPDVNK P+AE   KEI+ AYEVLSD EKRS+ D+FG AG   A G      ++PF  +FE+ F GT                    G D  Y+L I+F+EA+FGVEK IE  R+ETC  C
Sbjct:    6 DYYEVLGVQRNASQDEIKKAFRRLARQYHPDVNKAPDAEAKFKEINEAYEVLSDPEKRSMYDRFGHAGPTAAPGFDPFASADPFSSIFETFFGGTMRGTQRGPQR----------GADLRYTLSISFEEAIFGVEKTIEYRRMETCPAC 144          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_NOSP7 (Chaperone protein dnaJ OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.011e-31
Identity = 73/150 (48.67%), Postives = 89/150 (59.33%), Query Frame = 3
Query:  222 DYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNKEPNAEQHLKEISNAYEVLSDDEKRSLNDKFGEAGLKGAGMG---MGDFSNPFDLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            DYY +LGVSR+  K E+K AYR+LAR YHPDVNKEP AE   KEI+ AYEVLS+ E R+  D+FG  G+ GAG G   +GD     D+FES+F G                     G D    L ++F+EAVFG EKEI I+ LE C  C
Sbjct:    4 DYYEILGVSRDTDKEELKQAYRRLARKYHPDVNKEPGAEDRFKEINRAYEVLSEPETRARYDRFGPEGVSGAGAGFQDVGDMGGFADIFESIFSG--FAGGMGSPTQQRRRSGPARGDDLRLDLKLDFREAVFGGEKEIRISHLENCEVC 151          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_CYAP8 (Chaperone protein dnaJ OS=Cyanothece sp. (strain PCC 8801) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 2.941e-31
Identity = 73/150 (48.67%), Postives = 88/150 (58.67%), Query Frame = 3
Query:  222 DYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNKEPNAEQHLKEISNAYEVLSDDEKRSLNDKFGEAGLKG---AGMGMGDFSNPFDLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            DYY  LGV RNASK +IK AYR+LAR YHPD+NKE  AE   KEI+ AYEVLS+ E R+  D+FGEAG+ G   AG   GD     D+FE++F G                     G D    L ++F+EA+FG EKEI I  LETC  C
Sbjct:    4 DYYETLGVDRNASKEDIKRAYRRLARKYHPDINKEAGAEDRFKEINRAYEVLSEPETRARYDQFGEAGVSGAGAAGFDYGDMGGFADIFETIFSG---FGGGVGTGSTRRRTGPTRGDDLRLDLKLDFREAIFGGEKEIRIPHLETCQVC 150          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_PROMA (Chaperone protein dnaJ OS=Prochlorococcus marinus GN=dnaJ PE=3 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 3.841e-31
Identity = 74/150 (49.33%), Postives = 89/150 (59.33%), Query Frame = 3
Query:  219 SDYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNKEPNAEQHLKEISNAYEVLSDDEKRSLNDKFGEAGLKG-AGM-GMGDFSNPFDLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            +D+Y  LGV+RNA    +K AYR+LAR YHPD+NKE  AE+  KEI  AYEVL D EKR+  D+FGEAGL G AGM  MGD     D+FE+ F G                     G D  Y L I+F +AVFG E+EI+I  LETC  C
Sbjct:    2 ADFYDTLGVNRNADADSLKRAYRRLARQYHPDINKEAGAEERFKEIGRAYEVLGDPEKRARYDQFGEAGLGGSAGMPDMGDMGGFADIFETFFSG---FGGPGSSGARTQRRGPQQGDDLRYDLTIDFNQAVFGQEREIKIPHLETCDVC 148          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_GLOVI (Chaperone protein dnaJ OS=Gloeobacter violaceus GN=dnaJ PE=3 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 3.841e-31
Identity = 77/154 (50.00%), Postives = 91/154 (59.09%), Query Frame = 3
Query:  222 DYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNKEPNAEQHLKEISNAYEVLSDDEKRSLNDKFGEAGLK-GAGMGMGDFSNP------FDLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            D Y  L VSR+ASK +IK AYRKLAR YHPDVNK+  AE   KE+S AYEVLSDD++R+  D+FGEAGL  G G G GDF+         D+FES F G                     G D  Y +V+ F+EA+FG EKEI I  L TC TC
Sbjct:    4 DLYETLNVSRDASKEDIKRAYRKLARQYHPDVNKDAGAEDTFKELSRAYEVLSDDDQRARYDRFGEAGLNGGVGGGPGDFAGAAGFGDISDIFESFFGG--FAGAGTGGRRATRPGGPTRGDDLRYDMVLEFQEAIFGGEKEITINHLITCETC 155          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_BACSK (Chaperone protein dnaJ OS=Bacillus clausii (strain KSM-K16) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 3.841e-31
Identity = 75/151 (49.67%), Postives = 88/151 (58.28%), Query Frame = 3
Query:  222 DYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNKEPNAEQHLKEISNAYEVLSDDEKRSLNDKFGEA----GLKGAGMGMGDFSNPFDLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            DYY VLGV RNAS  E+K AYRKLAR YHPDVNKE +AE   KE+  AY+ LSD +K++  D+FG A    G  GAG   GDF    D+F+  F G                     G D  Y++ + FKEAVFG E EIEI R ETCGTC
Sbjct:    5 DYYEVLGVDRNASVEEVKKAYRKLARKYHPDVNKEEDAEAKFKEVKEAYDTLSDPQKKARYDQFGHADPNQGFGGAG-ASGDFGGFSDIFDMFFGGGGGRRNPNAPR---------QGDDLQYTMTLEFKEAVFGKETEIEIPREETCGTC 145          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_SYNPX (Chaperone protein dnaJ OS=Synechococcus sp. (strain WH8102) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 5.017e-31
Identity = 73/150 (48.67%), Postives = 88/150 (58.67%), Query Frame = 3
Query:  219 SDYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNKEPNAEQHLKEISNAYEVLSDDEKRSLNDKFGEAGLKGA--GMGMGDFSNPFDLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            +DYY +LGV R+A    +K AYR  AR YHPD+NKEP AE   KEI  AYEVLSD + R+  D+FGEAGL GA     MGD     DLFE+ F+G                     G D  Y L I+F++AVFG E+EI+I  LETC TC
Sbjct:    2 ADYYDLLGVGRDADADTLKRAYRSKARKYHPDINKEPGAEDRFKEIGRAYEVLSDPQTRARYDQFGEAGLGGAAGASDMGDMGGFADLFETFFQG--FGGPGGAAAGRSGRRGPQQGDDLRYDLTIDFEQAVFGQEQEIKIPHLETCDTC 149          
The following BLAST results are available for this feature:
BLAST of CN184579 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAJ_TRIEI4.537e-3250.67Chaperone protein dnaJ OS=Trichodesmium erythraeum... [more]
DNAJ_SYNJB4.537e-3248.08Chaperone protein dnaJ OS=Synechococcus sp. GN=dna... [more]
DNAJ_CYAP75.926e-3249.33Chaperone protein dnaJ OS=Cyanothece sp. (strain P... [more]
DNAJ_ROSCS1.011e-3151.68Chaperone protein dnaJ OS=Roseiflexus castenholzii... [more]
DNAJ_NOSP71.011e-3148.67Chaperone protein dnaJ OS=Nostoc punctiforme (stra... [more]
DNAJ_CYAP82.941e-3148.67Chaperone protein dnaJ OS=Cyanothece sp. (strain P... [more]
DNAJ_PROMA3.841e-3149.33Chaperone protein dnaJ OS=Prochlorococcus marinus ... [more]
DNAJ_GLOVI3.841e-3150.00Chaperone protein dnaJ OS=Gloeobacter violaceus GN... [more]
DNAJ_BACSK3.841e-3149.67Chaperone protein dnaJ OS=Bacillus clausii (strain... [more]
DNAJ_SYNPX5.017e-3148.67Chaperone protein dnaJ OS=Synechococcus sp. (strai... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0005L18_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0005L18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184579 ID=CN184579; Name=CN184579; organism=Citrus sinensis; type=EST; length=664bp
GAGGGTCCACTTTTCACTTCTTTGACCACAATTGCCCTTATGCCAGTTGG
GGAGGGAAAAGAGGCCTGCTGCAAGAAGACATCGCAAGCAGGTTAAGCTG
TCTGGCTGCTCCAAGTTCAAGCTTTTTTTCACGCGATTCCTTCTCTTTGT
TTTCTTATGCTAGTCCATCTCAGACTTCATACCGTCGTAGGGGAGCACGA
TTGATCGTTAGAGCTGATAGTGACTACTATTCAGTTCTAGGGGTGTCAAG
AAATGCAAGTAAATCTGAAATTAAAAGCGCTTATCGGAAGCTTGCAAGGA
GTTATCACCCGGATGTAAACAAAGAACCTAATGCAGAACAGCATCTCAAG
GAAATTAGCAATGCATATGAGGTTCTGTCAGATGATGAGAAACGTTCTTT
AAATGACAAATTTGGGGAGGCTGGACTTAAAGGTGCTGGTATGGGCATGG
GGGATTTCAGCAATCCTTTCGATTTGTTTGAATCACTATTTGAGGGCACG
GGTGGTATGGGCGGAATGGGGAGCATGGGGAGCAGAGCTTCCAGGAGCAG
AGCAGTTGATGGACAAGATGAATATTACAGCCTTGTCATAAATTTCAAAG
AAGCTGTTTTTGGCGTTGAAAAGGAGATTGAGATAACACGTCTTGAGACC
TGTGGCACTTGCCA
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