CN184579

Overview
NameCN184579
Unique NameCN184579
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length664
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_STRPN (Chaperone protein dnaJ OS=Streptococcus pneumoniae GN=dnaJ PE=1 SV=2)

HSP 1 Score: 119.783 bits (299), Expect = 1.279e-26
Identity = 67/158 (42.41%), Postives = 87/158 (55.06%), Query Frame = 3
Query:  216 DSDYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNKEPNAEQHLKEISNAYEVLSDDEKRSLNDKFGEAGLK----GAG-----MGMGDFSNPFDLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            ++++Y  LGVS+NAS  EIK AYRKL++ YHPD+NKEP AE   KE+  AYE LSDD+KR+  D++G AG      GAG      G G F    D+F S F G                     G D  Y + + F+EA+FG EKE++  R   C TC
Sbjct:    3 NTEFYDRLGVSKNASADEIKKAYRKLSKKYHPDINKEPGAEDKYKEVQEAYETLSDDQKRAAYDQYGAAGANGGFGGAGGFGGFNGAGGFGGFEDIFSSFFGGGGSSRNPNAPR---------QGDDLQYRVNLTFEEAIFGTEKEVKYHREAGCRTC 151          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_LACGA (Chaperone protein dnaJ OS=Lactobacillus gasseri (strain ATCC 33323 / DSM 20243) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.279e-26
Identity = 68/169 (40.24%), Postives = 92/169 (54.44%), Query Frame = 3
Query:  213 ADSDYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNKEPNAEQHLKEISNAYEVLSDDEKRSLNDKFGEAGLKG------------------AGMGMGDFSNPF-DLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            A  DYY VLGV +NAS+S+I  AYRKLA+ YHPD+N EP AE+  KE++ AYEVL D +K++  D+FG+AG+ G                  +  G GDF + F D+F S F G                     GQD  Y++ I+F +A+ G + +I  TR E C TC
Sbjct:    2 AQRDYYDVLGVDKNASESDINKAYRKLAKKYHPDLNHEPGAEEKYKEVNEAYEVLHDKQKKAQYDQFGQAGVNGQAGFGGQGYGGFGGQGGYSSQGFGDFGDIFGDIFGSAFGG---------GRSRVDPTAPQKGQDLDYTMTIDFMDAIKGKKTDITYTRSEVCPTC 161          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_HALOH (Chaperone protein dnaJ OS=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.279e-26
Identity = 66/153 (43.14%), Postives = 87/153 (56.86%), Query Frame = 3
Query:  222 DYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNK-EPNAEQHLKEISNAYEVLSDDEKRSLNDKFGEAGLKGAGMGMGDFSNP-----FDLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            DYY +LGVSR+A + EIK AYR+LAR YHPD+NK +P+AE+  KEIS AYE+LSD +KR+  D++G AG+        DF+        D+F+  F G                     G D  Y + I F++A FG  K+I I R ETC TC
Sbjct:    6 DYYEILGVSRDADQKEIKKAYRRLARKYHPDINKDDPDAEEKFKEISEAYEILSDPDKRARYDQYGHAGINEEDFNFEDFAQRGFGGFDDIFDMFFGGGMGRRRRGPR----------PGADLQYRMKIPFEDAAFGTTKKITIPRTETCDTC 148          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_ANATD (Chaperone protein dnaJ OS=Anaerocellum thermophilum (strain DSM 6725 / Z-1320) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.279e-26
Identity = 73/163 (44.79%), Postives = 86/163 (52.76%), Query Frame = 3
Query:  222 DYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNK-EPNAEQHLKEISNAYEVLSDDEKRSLNDKFGEA------GLKGAGMGMGDFSNPF---------DLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            DYY +LGV RNA++ EIK AYR+LA+ YHPD N     AE+  KEI+ AYEVLSD EKR L D+FG A      G +G+G   G F   F         D+FE LFEG                     G D Y  L +  KE+VFG EKEI I R E C  C
Sbjct:    6 DYYEILGVPRNATEEEIKRAYRRLAKQYHPDANPGNKEAEEKFKEINEAYEVLSDPEKRKLYDQFGHAAFDPKYGAQGSGGFSGGFGGGFADFDFGSFGDIFEDLFEGFDIFGTSRRRKEAPR-----KGADIYVDLELTLKESVFGCEKEIPIYRTEKCSVC 163          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_PEDPA (Chaperone protein dnaJ OS=Pediococcus pentosaceus (strain ATCC 25745 / 183-1w) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 2.849e-26
Identity = 66/159 (41.51%), Postives = 89/159 (55.97%), Query Frame = 3
Query:  213 ADSDYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNKEPNAEQHLKEISNAYEVLSDDEKRSLNDKFG----EAGLKGAGM----GMGDFSNPF-DLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            A+ DYY +LGVS++AS  EIK AYRKL++ YHPD+NK P+AEQ  K+++ AYEVL D +KR+  D+FG     AG  G G     G  DF   F D+F S F G                     G+D  Y + + F+EA+FG +  I+ +R   C TC
Sbjct:    3 ANKDYYDILGVSKDASDDEIKKAYRKLSKKYHPDINKAPDAEQKFKDVNEAYEVLGDSQKRAQYDQFGSADPNAGFGGGGFGGQGGFSDFGGGFEDIFGSFFGGGQRQSPNQPR----------QGEDLQYQMSLKFEEAIFGKKTTIKYSREALCKTC 151          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_LACLS (Chaperone protein dnaJ OS=Lactococcus lactis subsp. cremoris (strain SK11) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 2.849e-26
Identity = 64/164 (39.02%), Postives = 87/164 (53.05%), Query Frame = 3
Query:  216 DSDYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNKEPNAEQHLKEISNAYEVLSDDEKRSLNDKFGEAGLKGA---------------GMGMGDFSNPFDLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            +++YY  LGV +NAS+ EIK AYRK+++ YHPD+NKE  AE   KE+  AYE LSD++KR+  D++GEAG  G                G   G F    D+F S F G                     G D  Y + + F+EA+FGVEK+++  R E C TC
Sbjct:    3 NTEYYERLGVDKNASQDEIKKAYRKMSKKYHPDLNKEEGAEDKYKEVQEAYETLSDEQKRAAYDQYGEAGANGGFGGGGFGGASGFSGFGGASGGFGGFEDIFSSFFGGGGAQVNPNAPR---------QGDDLQYRINLKFEEAIFGVEKQVKYNREELCHTC 157          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_LACLM (Chaperone protein dnaJ OS=Lactococcus lactis subsp. cremoris (strain MG1363) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 2.849e-26
Identity = 64/164 (39.02%), Postives = 87/164 (53.05%), Query Frame = 3
Query:  216 DSDYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNKEPNAEQHLKEISNAYEVLSDDEKRSLNDKFGEAGLKGA---------------GMGMGDFSNPFDLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            +++YY  LGV +NAS+ EIK AYRK+++ YHPD+NKE  AE   KE+  AYE LSD++KR+  D++GEAG  G                G   G F    D+F S F G                     G D  Y + + F+EA+FGVEK+++  R E C TC
Sbjct:    3 NTEYYERLGVDKNASQDEIKKAYRKMSKKYHPDLNKEEGAEDKYKEVQEAYETLSDEQKRAAYDQYGEAGANGGFGGGGFGGASGFSGFGGASGGFGGFEDIFSSFFGGGGAQVNPNAPR---------QGDDLQYRINLKFEEAIFGVEKQVKYNREELCHTC 157          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_ERYRH (Chaperone protein dnaJ OS=Erysipelothrix rhusiopathiae GN=dnaJ PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 2.849e-26
Identity = 64/148 (43.24%), Postives = 86/148 (58.11%), Query Frame = 3
Query:  222 DYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNKEPNAEQHLKEISNAYEVLSDDEKRSLNDKFGEAGL-KGAGMGMGDFSNPFDLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            D+Y +LGVS++A+ +EIK AYR+LA+ YHPD+NKE  AE   KE+  AYEVLSD +KR+  D+FG A   +GAG   G FS  FD F  +F                     + GQD + S+ I+F EAVFG  K + +   E C +C
Sbjct:    6 DFYEILGVSKSATDAEIKKAYRQLAKKYHPDINKEDGAEAKFKEVQEAYEVLSDSQKRANYDQFGHAAFDQGAGGFGGGFSGGFDDFGDIFSS---FFGGGGGGQRRNPNGPMKGQDRFMSMRIDFMEAVFGANKSVTLNVDEECTSC 150          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_CLONN (Chaperone protein dnaJ OS=Clostridium novyi (strain NT) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 2.849e-26
Identity = 71/160 (44.38%), Postives = 88/160 (55.00%), Query Frame = 3
Query:  213 ADSDYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNK-EPNAEQHLKEISNAYEVLSDDEKRSLNDKFGEAGLKGAGM---------GMGDFSNPFDLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            A  DYY VLG+S+ AS  EIK AYRKLA  YHPD N+    AE+  K+I+ AY+VLSD +K++  D+FG A   G G          GMG F    D+F+S F G                     G D  Y++ + F+EAVFGVEKEI ITR E C TC
Sbjct:    2 ASKDYYEVLGLSKGASDDEIKKAYRKLAMKYHPDRNQGNKEAEEKFKDINEAYQVLSDPQKKANYDQFGSADFNGGGFGGFGGGGFSGMGGFE---DIFDSFFGGGFSSRRRNGPER---------GADLEYTVSLTFEEAVFGVEKEISITRNEKCDTC 149          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_METAC (Chaperone protein dnaJ OS=Methanosarcina acetivorans GN=dnaJ PE=3 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 3.720e-26
Identity = 67/152 (44.08%), Postives = 80/152 (52.63%), Query Frame = 3
Query:  222 DYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNKEPNAEQHLKEISNAYEVLSDDEKRSLNDKFGEAGLKGAGMGM-----GDFSNPFDLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            DYY +LG+ ++AS  +IK  YRKLA  YHPD NK+P AE   KEIS AY VLSD EKR+  D+FG AG+             DF    D+FE  F G                     G D  Y L I F+EA FGV K+I+I R E C TC
Sbjct:    6 DYYEILGLPKDASVEDIKKTYRKLALQYHPDRNKDPGAEDKFKEISEAYAVLSDTEKRAQYDRFGHAGIDNQYSAEDIFRGADFGGFGDIFEMFFGGGRRGGPMGPRR----------GSDLQYDLYITFEEAAFGVRKDIDIPRTERCSTC 147          
The following BLAST results are available for this feature:
BLAST of CN184579 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAJ_STRPN1.279e-2642.41Chaperone protein dnaJ OS=Streptococcus pneumoniae... [more]
DNAJ_LACGA1.279e-2640.24Chaperone protein dnaJ OS=Lactobacillus gasseri (s... [more]
DNAJ_HALOH1.279e-2643.14Chaperone protein dnaJ OS=Halothermothrix orenii (... [more]
DNAJ_ANATD1.279e-2644.79Chaperone protein dnaJ OS=Anaerocellum thermophilu... [more]
DNAJ_PEDPA2.849e-2641.51Chaperone protein dnaJ OS=Pediococcus pentosaceus ... [more]
DNAJ_LACLS2.849e-2639.02Chaperone protein dnaJ OS=Lactococcus lactis subsp... [more]
DNAJ_LACLM2.849e-2639.02Chaperone protein dnaJ OS=Lactococcus lactis subsp... [more]
DNAJ_ERYRH2.849e-2643.24Chaperone protein dnaJ OS=Erysipelothrix rhusiopat... [more]
DNAJ_CLONN2.849e-2644.38Chaperone protein dnaJ OS=Clostridium novyi (strai... [more]
DNAJ_METAC3.720e-2644.08Chaperone protein dnaJ OS=Methanosarcina acetivora... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS04_0005L18_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0005L18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184579 ID=CN184579; Name=CN184579; organism=Citrus sinensis; type=EST; length=664bp
GAGGGTCCACTTTTCACTTCTTTGACCACAATTGCCCTTATGCCAGTTGG
GGAGGGAAAAGAGGCCTGCTGCAAGAAGACATCGCAAGCAGGTTAAGCTG
TCTGGCTGCTCCAAGTTCAAGCTTTTTTTCACGCGATTCCTTCTCTTTGT
TTTCTTATGCTAGTCCATCTCAGACTTCATACCGTCGTAGGGGAGCACGA
TTGATCGTTAGAGCTGATAGTGACTACTATTCAGTTCTAGGGGTGTCAAG
AAATGCAAGTAAATCTGAAATTAAAAGCGCTTATCGGAAGCTTGCAAGGA
GTTATCACCCGGATGTAAACAAAGAACCTAATGCAGAACAGCATCTCAAG
GAAATTAGCAATGCATATGAGGTTCTGTCAGATGATGAGAAACGTTCTTT
AAATGACAAATTTGGGGAGGCTGGACTTAAAGGTGCTGGTATGGGCATGG
GGGATTTCAGCAATCCTTTCGATTTGTTTGAATCACTATTTGAGGGCACG
GGTGGTATGGGCGGAATGGGGAGCATGGGGAGCAGAGCTTCCAGGAGCAG
AGCAGTTGATGGACAAGATGAATATTACAGCCTTGTCATAAATTTCAAAG
AAGCTGTTTTTGGCGTTGAAAAGGAGATTGAGATAACACGTCTTGAGACC
TGTGGCACTTGCCA
back to top