CN184579

Overview
NameCN184579
Unique NameCN184579
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length664
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_DESHY (Chaperone protein dnaJ OS=Desulfitobacterium hafniense (strain Y51) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 3.720e-26
Identity = 67/152 (44.08%), Postives = 83/152 (54.61%), Query Frame = 3
Query:  222 DYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNK-EPNAEQHLKEISNAYEVLSDDEKRSLNDKFGEAGLKGAGMGMGDFSNPF----DLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            DYY VLGVS++A + EIK AYRKLAR YHPDVN  + +AE+  KE + AY+VLSD EKR+  D+ G +       G G F   F    D+F+  F G                     G D  Y L I F+EA FG EKEI++ R ETC  C
Sbjct:    4 DYYEVLGVSKSADEQEIKKAYRKLARQYHPDVNPGDKDAEEKFKEATEAYDVLSDTEKRARYDQMGHSAFDPNQQGFGGFGGDFGGFGDIFDMFFGG--------GGGGGQRRQGPTRGNDLRYDLTITFEEAAFGTEKEIQVPRQETCTEC 147          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_DESHD (Chaperone protein dnaJ OS=Desulfitobacterium hafniense (strain DCB-2 / DSM 10664) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 3.720e-26
Identity = 67/152 (44.08%), Postives = 83/152 (54.61%), Query Frame = 3
Query:  222 DYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNK-EPNAEQHLKEISNAYEVLSDDEKRSLNDKFGEAGLKGAGMGMGDFSNPF----DLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            DYY VLGVS++A + EIK AYRKLAR YHPDVN  + +AE+  KE + AY+VLSD EKR+  D+ G +       G G F   F    D+F+  F G                     G D  Y L I F+EA FG EKEI++ R ETC  C
Sbjct:    4 DYYEVLGVSKSADEQEIKKAYRKLARQYHPDVNPGDKDAEEKFKEATEAYDVLSDTEKRARYDQMGHSAFDPNQQGFGGFGGDFGGFGDIFDMFFGG--------GGGGGQRRQGPTRGNDLRYDLTITFEEAAFGTEKEIQVPRQETCTEC 147          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_LACSS (Chaperone protein dnaJ OS=Lactobacillus sakei subsp. sakei (strain 23K) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 4.859e-26
Identity = 67/161 (41.61%), Postives = 85/161 (52.80%), Query Frame = 3
Query:  222 DYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNKEPNAEQHLKEISNAYEVLSDDEKRSLNDKFGEAGLK-------GAGMGMGDFSNPF-------DLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            DYY VLGV R+AS  EIK AYRKL++ YHPD+NK P+AE   KE++ AYE LSD +KR+  D++G AG+        GAG G G F           D+F S F G                     G D  Y + + F+EAVFG E +I  +R   C TC
Sbjct:    6 DYYDVLGVGRDASDDEIKKAYRKLSKKYHPDINKAPDAEAKFKEVTEAYEALSDPQKRAAYDQYGHAGMNGGFGGGAGAGQGFGGFGGGAEGFGGFDDIFSSFFGGGARQQPNGPR----------QGSDLQYRMDLKFEEAVFGKETKISYSREAECHTC 156          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_LACSK (Chaperone protein dnaJ OS=Lactobacillus sakei GN=dnaJ PE=2 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 4.859e-26
Identity = 67/161 (41.61%), Postives = 85/161 (52.80%), Query Frame = 3
Query:  222 DYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNKEPNAEQHLKEISNAYEVLSDDEKRSLNDKFGEAGLK-------GAGMGMGDFSNPF-------DLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            DYY VLGV R+AS  EIK AYRKL++ YHPD+NK P+AE   KE++ AYE LSD +KR+  D++G AG+        GAG G G F           D+F S F G                     G D  Y + + F+EAVFG E +I  +R   C TC
Sbjct:    6 DYYDVLGVGRDASDDEIKKAYRKLSKKYHPDINKAPDAEAKFKEVTEAYEALSDPQKRAAYDQYGHAGMNGGFGGGAGAGQGFGGFGGGAEGFGGFDDIFSSFFGGGARQQPNGPR----------QGSDLQYRMDLKFEEAVFGKETKISYSREAECHTC 156          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_LACLC (Chaperone protein dnaJ OS=Lactococcus lactis subsp. cremoris GN=dnaJ PE=3 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 4.859e-26
Identity = 65/164 (39.63%), Postives = 89/164 (54.27%), Query Frame = 3
Query:  216 DSDYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNKEPNAEQHLKEISNAYEVLSDDEKRSLNDKFGEAGLKG-------------AGMG--MGDFSNPFDLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            +++YY  LGV +NAS+ EIK AYRK+++ YHPD+NKE  AE   KE+  AYE LSD++KR+  D++GEAG  G             +G G   G F    D+F S F G                     G D  Y + + F+EA+FGVEK+++  R E C TC
Sbjct:    3 NTEYYERLGVDKNASQDEIKKAYRKMSKKYHPDLNKEEGAEDKYKEVQEAYETLSDEQKRAAYDQYGEAGRNGGFGGGGFGGASGFSGFGGRSGGFGGFEDIFSSFFGGGGAQVNPNAPR---------QGDDLQYRINLKFEEAIFGVEKQVKYNREELCHTC 157          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_STRT2 (Chaperone protein dnaJ OS=Streptococcus thermophilus (strain ATCC BAA-250 / LMG 18311) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 6.346e-26
Identity = 67/160 (41.88%), Postives = 87/160 (54.37%), Query Frame = 3
Query:  216 DSDYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNKEPNAEQHLKEISNAYEVLSDDEKRSLNDKFGEAGLKG-----------AGMGMGDFSNPFDLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            +++YY  LG+S++AS+ EIK AYRKL++ YHPD+NKEP AE+  KEI  AYE LSD +KR+  D++G  G  G            G G G F    D+F S F G                     G D  Y + ++F+EAVFG EKEI   R  TC TC
Sbjct:    3 NTEYYDRLGLSKDASQDEIKRAYRKLSKKYHPDINKEPGAEEKYKEILEAYETLSDAQKRAAYDQYGPDGANGFGGQGSFGGFDGGAGFGGFE---DIFSSFFGGGATRNPNAPR----------QGDDLQYRVNLSFEEAVFGAEKEIHYNREVTCKTC 149          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_STRT1 (Chaperone protein dnaJ OS=Streptococcus thermophilus (strain CNRZ 1066) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 6.346e-26
Identity = 67/160 (41.88%), Postives = 87/160 (54.37%), Query Frame = 3
Query:  216 DSDYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNKEPNAEQHLKEISNAYEVLSDDEKRSLNDKFGEAGLKG-----------AGMGMGDFSNPFDLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            +++YY  LG+S++AS+ EIK AYRKL++ YHPD+NKEP AE+  KEI  AYE LSD +KR+  D++G  G  G            G G G F    D+F S F G                     G D  Y + ++F+EAVFG EKEI   R  TC TC
Sbjct:    3 NTEYYDRLGLSKDASQDEIKRAYRKLSKKYHPDINKEPGAEEKYKEILEAYETLSDAQKRAAYDQYGPDGANGFGGQGSFGGFDGGAGFGGFE---DIFSSFFGGGATRNPNAPR----------QGDDLQYRVNLSFEEAVFGAEKEIHYNREVTCKTC 149          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_LACDB (Chaperone protein dnaJ OS=Lactobacillus delbrueckii subsp. bulgaricus (strain ATCC BAA-365) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 8.288e-26
Identity = 66/160 (41.25%), Postives = 86/160 (53.75%), Query Frame = 3
Query:  213 ADSDYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNKEPNAEQHLKEISNAYEVLSDDEKRSLNDKFGEAGLK----------GAGMGMGDFSNPFDLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            A+ DYY VLGVSR+AS +EI  AYRKLA+ YHPD+N E  AE+  KE++ AYEVL D +KR   D+FG+AG+           G G G  DF +  D+F S F G                     G D  Y++ I+F +A+ G   EI  +R  TC  C
Sbjct:    3 ANRDYYDVLGVSRDASDAEISKAYRKLAKKYHPDLNHEAGAEEKYKEVNEAYEVLHDPQKRQQYDQFGQAGMNGQGGFGGQYGGQGFGGADFGDFGDIFSSFFGGARQQVDPTAPQR---------GADLDYTMTIDFMDAIKGKTSEISYSRSTTCEVC 153          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_LACDA (Chaperone protein dnaJ OS=Lactobacillus delbrueckii subsp. bulgaricus (strain ATCC 11842 / DSM 20081) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 8.288e-26
Identity = 66/160 (41.25%), Postives = 86/160 (53.75%), Query Frame = 3
Query:  213 ADSDYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNKEPNAEQHLKEISNAYEVLSDDEKRSLNDKFGEAGLK----------GAGMGMGDFSNPFDLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            A+ DYY VLGVSR+AS +EI  AYRKLA+ YHPD+N E  AE+  KE++ AYEVL D +KR   D+FG+AG+           G G G  DF +  D+F S F G                     G D  Y++ I+F +A+ G   EI  +R  TC  C
Sbjct:    3 ANRDYYDVLGVSRDASDAEISKAYRKLAKKYHPDLNHEAGAEEKYKEVNEAYEVLHDPQKRQQYDQFGQAGMNGQGGFGGQYGGQGFGGADFGDFGDIFSSFFGGARQQVDPTAPQR---------GADLDYTMTIDFMDAIKGKTSEISYSRSTTCEVC 153          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_STRA1 (Chaperone protein dnaJ OS=Streptococcus agalactiae serotype Ia GN=dnaJ PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.082e-25
Identity = 60/151 (39.74%), Postives = 86/151 (56.95%), Query Frame = 3
Query:  216 DSDYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNKEPNAEQHLKEISNAYEVLSDDEKRSLNDKFGEAGLKG--AGMGMGDFSNPFDLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            ++++Y  LGVS++AS+ EIK AYR++++ YHPD+NKE  AE+  KE+  AYE LSD +KR+  D++G AG  G   G   G F    D+F S F G                     G D  Y + ++F+EA+FG EKE+   R  +C TC
Sbjct:    3 NTEFYDRLGVSKDASQDEIKKAYRRMSKKYHPDINKEAGAEEKYKEVQEAYETLSDTQKRAAYDQYGAAGANGGFGGFDGGGFGGFEDIFSSFFGGGGMRNPNAPR----------QGDDLQYRVNLSFEEAIFGAEKEVSYNRESSCHTC 143          
The following BLAST results are available for this feature:
BLAST of CN184579 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAJ_DESHY3.720e-2644.08Chaperone protein dnaJ OS=Desulfitobacterium hafni... [more]
DNAJ_DESHD3.720e-2644.08Chaperone protein dnaJ OS=Desulfitobacterium hafni... [more]
DNAJ_LACSS4.859e-2641.61Chaperone protein dnaJ OS=Lactobacillus sakei subs... [more]
DNAJ_LACSK4.859e-2641.61Chaperone protein dnaJ OS=Lactobacillus sakei GN=d... [more]
DNAJ_LACLC4.859e-2639.63Chaperone protein dnaJ OS=Lactococcus lactis subsp... [more]
DNAJ_STRT26.346e-2641.88Chaperone protein dnaJ OS=Streptococcus thermophil... [more]
DNAJ_STRT16.346e-2641.88Chaperone protein dnaJ OS=Streptococcus thermophil... [more]
DNAJ_LACDB8.288e-2641.25Chaperone protein dnaJ OS=Lactobacillus delbruecki... [more]
DNAJ_LACDA8.288e-2641.25Chaperone protein dnaJ OS=Lactobacillus delbruecki... [more]
DNAJ_STRA11.082e-2539.74Chaperone protein dnaJ OS=Streptococcus agalactiae... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0005L18_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0005L18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184579 ID=CN184579; Name=CN184579; organism=Citrus sinensis; type=EST; length=664bp
GAGGGTCCACTTTTCACTTCTTTGACCACAATTGCCCTTATGCCAGTTGG
GGAGGGAAAAGAGGCCTGCTGCAAGAAGACATCGCAAGCAGGTTAAGCTG
TCTGGCTGCTCCAAGTTCAAGCTTTTTTTCACGCGATTCCTTCTCTTTGT
TTTCTTATGCTAGTCCATCTCAGACTTCATACCGTCGTAGGGGAGCACGA
TTGATCGTTAGAGCTGATAGTGACTACTATTCAGTTCTAGGGGTGTCAAG
AAATGCAAGTAAATCTGAAATTAAAAGCGCTTATCGGAAGCTTGCAAGGA
GTTATCACCCGGATGTAAACAAAGAACCTAATGCAGAACAGCATCTCAAG
GAAATTAGCAATGCATATGAGGTTCTGTCAGATGATGAGAAACGTTCTTT
AAATGACAAATTTGGGGAGGCTGGACTTAAAGGTGCTGGTATGGGCATGG
GGGATTTCAGCAATCCTTTCGATTTGTTTGAATCACTATTTGAGGGCACG
GGTGGTATGGGCGGAATGGGGAGCATGGGGAGCAGAGCTTCCAGGAGCAG
AGCAGTTGATGGACAAGATGAATATTACAGCCTTGTCATAAATTTCAAAG
AAGCTGTTTTTGGCGTTGAAAAGGAGATTGAGATAACACGTCTTGAGACC
TGTGGCACTTGCCA
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