CN184579

Overview
NameCN184579
Unique NameCN184579
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length664
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_STRMU (Chaperone protein dnaJ OS=Streptococcus mutans GN=dnaJ PE=3 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.414e-25
Identity = 62/153 (40.52%), Postives = 86/153 (56.21%), Query Frame = 3
Query:  216 DSDYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNKEPNAEQHLKEISNAYEVLSDDEKRSLNDKFGEAGLKGA---GMGMGDF-SNPFDLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            + +YY  LGVS++AS+ EIK AYR++++ YHPD+NKEP AE+  KEI  AY+ L D++KR+  D++G AG  G    G G   F S+ F  FE +F                       G D  Y + + F+EAVFG EKE+   R  +C TC
Sbjct:    3 NQEYYDRLGVSKDASQDEIKKAYRRMSKKYHPDINKEPGAEEKYKEIQEAYDTLGDEQKRAAYDQYGPAGANGGFGDGSGFSGFDSSGFGGFEDIFSSFFGGGASRNPNAPR------QGDDLQYRVNLQFEEAVFGTEKEVHYNREASCHTC 149          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_LACAC (Chaperone protein dnaJ OS=Lactobacillus acidophilus GN=dnaJ PE=3 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.414e-25
Identity = 68/167 (40.72%), Postives = 89/167 (53.29%), Query Frame = 3
Query:  213 ADSDYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNKEPNAEQHLKEISNAYEVLSDDEKRSLNDKFGEAGLKGAG----------------MGMGDFSNPFDLFESLF-EGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            A  DYY VLGV R+AS  EI  AYRKLA+ YHPD+N EP AE+  K+++ AYEVL D +KR+  D+FG AG+ G G                 G GDF    D+F  +F +G                     GQD  Y+L I+F +A+ G + ++  TR ETC TC
Sbjct:    2 AQEDYYKVLGVDRDASDQEISKAYRKLAKKYHPDLNHEPGAEEKYKQVNEAYEVLHDKQKRAQYDQFGSAGVNGQGGFGGAGQGFGGAGFDTSGFGDFG---DIFGDIFGQGARQQRVDPTQPQR--------GQDLDYTLTIDFMDAINGKKTQVSYTRDETCETC 157          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_CLOTH (Chaperone protein dnaJ OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.414e-25
Identity = 69/161 (42.86%), Postives = 88/161 (54.66%), Query Frame = 3
Query:  222 DYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNK-EPNAEQHLKEISNAYEVLSDDEKRSLNDKFGEA-----GLKGAGMGMG--------DFSNPFDLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            DYY +LGV R AS +EIK AYRKLA+ YHPD+N  +  AE   KEI+ AYEVLSD +KR+  D+FG +     G  G G G G        DF    D+FE+ F                       G D  YS+ ++F+EA FG EKE+ ++RLE C TC
Sbjct:    6 DYYEILGVDRGASDAEIKKAYRKLAKQYHPDMNPGDKAAEAKFKEINEAYEVLSDPQKRARYDQFGHSAFDPNGFGGGGFGGGFTGGFGDFDFGGFGDIFEAFF------GSGFGTRTSSARRGPQKGADLKYSMEVSFEEAAFGTEKEVTVSRLEICPTC 160          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_PHOLL (Chaperone protein dnaJ OS=Photorhabdus luminescens subsp. laumondii GN=dnaJ PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 1.846e-25
Identity = 68/154 (44.16%), Postives = 88/154 (57.14%), Query Frame = 3
Query:  213 ADSDYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNK-EPNAEQHLKEISNAYEVLSDDEKRSLNDKFGEAGLKGAGMGMG--DFSNPF-DLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            A  DYY VLGVS+ AS+ EIK AY++LA  YHPD N+ +  AE   KE+  AYE+L+DD+KR+  D++G A  +  GMG G  DFS+ F D+F  +F G                     G D  YS+ +  +EAV GV KEI I  LETC  C
Sbjct:    2 AKRDYYEVLGVSKTASEKEIKKAYKRLAMKYHPDRNQGDKEAESQFKEVKEAYEILTDDQKRAAYDQYGHAAFEQGGMGGGGADFSDIFGDVFGDIFGGGRRQQRPSR------------GADLRYSMELTLEEAVRGVTKEIRIPTLETCDIC 143          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_LACRJ (Chaperone protein dnaJ OS=Lactobacillus reuteri (strain JCM 1112) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 1.846e-25
Identity = 63/153 (41.18%), Postives = 86/153 (56.21%), Query Frame = 3
Query:  213 ADSDYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNKEPNAEQHLKEISNAYEVLSDDEKRSLNDKFGEAGLKGA-GMGMGDF--SNPFDLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            A+ DYY +LGVS++AS+ +IK AYR+LA  YHPDVN EP AE+  K+I+ AYE LSD +KR+  D+FG AG +GA G G G F     +  F   F+                      G+D  Y++ ++F +AVFG    I+  R   C TC
Sbjct:    2 AEQDYYDILGVSKDASEKDIKRAYRRLAAKYHPDVNHEPGAEEKFKKINEAYETLSDSQKRAQYDQFGSAGPQGAGGQGFGGFGGGQAYSNFGGGFDDIFSQFFGGGGRTRRDPTAPRQGRDLQYAMTLDFMDAVFGKTTTIKYDRDAECKTC 154          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_LACRD (Chaperone protein dnaJ OS=Lactobacillus reuteri (strain DSM 20016) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 1.846e-25
Identity = 63/153 (41.18%), Postives = 86/153 (56.21%), Query Frame = 3
Query:  213 ADSDYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNKEPNAEQHLKEISNAYEVLSDDEKRSLNDKFGEAGLKGA-GMGMGDF--SNPFDLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            A+ DYY +LGVS++AS+ +IK AYR+LA  YHPDVN EP AE+  K+I+ AYE LSD +KR+  D+FG AG +GA G G G F     +  F   F+                      G+D  Y++ ++F +AVFG    I+  R   C TC
Sbjct:    2 AEQDYYDILGVSKDASEKDIKRAYRRLAAKYHPDVNHEPGAEEKFKKINEAYETLSDSQKRAQYDQFGSAGPQGAGGQGFGGFGGGQAYSNFGGGFDDIFSQFFGGGGRTRRDPTAPRQGRDLQYAMTLDFMDAVFGKTTTIKYDRDAECKTC 154          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_LACF3 (Chaperone protein dnaJ OS=Lactobacillus fermentum (strain IFO 3956 / LMG 18251) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 1.846e-25
Identity = 65/164 (39.63%), Postives = 87/164 (53.05%), Query Frame = 3
Query:  213 ADSDYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNKEPNAEQHLKEISNAYEVLSDDEKRSLNDKFGEAGLKGAGMG--------------MGDFSNPFDLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            A+ D Y VLGV ++AS++EIK AYRKLA  YHPDVN EP AE+  K+I+ AYE LSDD+KR+  D+FG  G +  G G               G F +  D+F  +F G                     G+D  Y++ ++F +AVFG E  I+  R   C TC
Sbjct:    2 AEEDLYDVLGVKKDASEAEIKRAYRKLAAKYHPDVNHEPGAEKKFKKINEAYETLSDDQKRAQYDQFGTTGSQAGGFGGQGGFGGFGQGGFSQGGFGDFSDIFGDIFGG---------GRARRDPSAPQQGRDLQYTMTLDFMDAVFGKETSIKYNRSAECHTC 156          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_LEPBP (Chaperone protein dnaJ OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / ATCC 23582 / Paris) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 4.113e-25
Identity = 70/157 (44.59%), Postives = 87/157 (55.41%), Query Frame = 3
Query:  213 ADSDYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNK-EPNAEQHLKEISNAYEVLSDDEKRSLNDKFGEAGLK-GAGMGMG-----DFSNPFDLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            +D  YY VLGVS+ AS  EIKSAYRKLA  YHPD NK +  AE+  KE + AYEVL D +KR   D+FG+AG+  GAG G G     DFS+ F  F  +F                       G D  Y+L ++ ++A  G E +IEI RLETC  C
Sbjct:    2 SDRGYYEVLGVSKGASDDEIKSAYRKLAIKYHPDKNKGDKEAEEKFKEATEAYEVLRDPQKRQAYDQFGKAGVNAGAGGGYGAGAYTDFSDIFGDFGDIFSEFFGGGGGGGSRGGGRRSGPQRGSDLRYNLEVSLEDAALGKEYKIEIPRLETCVDC 158          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_LEPBA (Chaperone protein dnaJ OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / Ames) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 4.113e-25
Identity = 70/157 (44.59%), Postives = 87/157 (55.41%), Query Frame = 3
Query:  213 ADSDYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNK-EPNAEQHLKEISNAYEVLSDDEKRSLNDKFGEAGLK-GAGMGMG-----DFSNPFDLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            +D  YY VLGVS+ AS  EIKSAYRKLA  YHPD NK +  AE+  KE + AYEVL D +KR   D+FG+AG+  GAG G G     DFS+ F  F  +F                       G D  Y+L ++ ++A  G E +IEI RLETC  C
Sbjct:    2 SDRGYYEVLGVSKGASDDEIKSAYRKLAIKYHPDKNKGDKEAEEKFKEATEAYEVLRDPQKRQAYDQFGKAGVNAGAGGGYGAGAYTDFSDIFGDFGDIFSEFFGGGGGGGSRGGGRRSGPQRGSDLRYNLEVSLEDAALGKEYKIEIPRLETCVDC 158          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_MYCGA (Chaperone protein dnaJ OS=Mycoplasma gallisepticum GN=dnaJ PE=3 SV=2)

HSP 1 Score: 114.39 bits (285), Expect = 5.372e-25
Identity = 63/157 (40.13%), Postives = 85/157 (54.14%), Query Frame = 3
Query:  222 DYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNKEPNAEQHLKEISNAYEVLSDDEKRSLNDKFGEAGLKGAGMGMGDFSNPFDLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYY----------SLVINFKEAVFGVEKEIEITRLETCGTC 662
            DYY +L VSR+A++ +IK A+RKLA  YHPD NK+ +AE+  KE++ AYEVLSD+EKR L D +G  GL  +G   G F NP+D+F S+F G                       ++ Y           + INF EA  G  K ++ TR  TC  C
Sbjct:    6 DYYEILEVSRSATQQDIKKAFRKLAMKYHPDRNKDSDAEEKFKEVNEAYEVLSDEEKRKLYDTYGHEGLNASGFHQGGF-NPYDVFNSVFSGFDFEGGFGDVFSQFFGGGGSGFHNQEYIEEVDVNLVHEIKINFLEAANGCIKNVKYTRQVTCPDC 161          
The following BLAST results are available for this feature:
BLAST of CN184579 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAJ_STRMU1.414e-2540.52Chaperone protein dnaJ OS=Streptococcus mutans GN=... [more]
DNAJ_LACAC1.414e-2540.72Chaperone protein dnaJ OS=Lactobacillus acidophilu... [more]
DNAJ_CLOTH1.414e-2542.86Chaperone protein dnaJ OS=Clostridium thermocellum... [more]
DNAJ_PHOLL1.846e-2544.16Chaperone protein dnaJ OS=Photorhabdus luminescens... [more]
DNAJ_LACRJ1.846e-2541.18Chaperone protein dnaJ OS=Lactobacillus reuteri (s... [more]
DNAJ_LACRD1.846e-2541.18Chaperone protein dnaJ OS=Lactobacillus reuteri (s... [more]
DNAJ_LACF31.846e-2539.63Chaperone protein dnaJ OS=Lactobacillus fermentum ... [more]
DNAJ_LEPBP4.113e-2544.59Chaperone protein dnaJ OS=Leptospira biflexa serov... [more]
DNAJ_LEPBA4.113e-2544.59Chaperone protein dnaJ OS=Leptospira biflexa serov... [more]
DNAJ_MYCGA5.372e-2540.13Chaperone protein dnaJ OS=Mycoplasma gallisepticum... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS04_0005L18_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0005L18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184579 ID=CN184579; Name=CN184579; organism=Citrus sinensis; type=EST; length=664bp
GAGGGTCCACTTTTCACTTCTTTGACCACAATTGCCCTTATGCCAGTTGG
GGAGGGAAAAGAGGCCTGCTGCAAGAAGACATCGCAAGCAGGTTAAGCTG
TCTGGCTGCTCCAAGTTCAAGCTTTTTTTCACGCGATTCCTTCTCTTTGT
TTTCTTATGCTAGTCCATCTCAGACTTCATACCGTCGTAGGGGAGCACGA
TTGATCGTTAGAGCTGATAGTGACTACTATTCAGTTCTAGGGGTGTCAAG
AAATGCAAGTAAATCTGAAATTAAAAGCGCTTATCGGAAGCTTGCAAGGA
GTTATCACCCGGATGTAAACAAAGAACCTAATGCAGAACAGCATCTCAAG
GAAATTAGCAATGCATATGAGGTTCTGTCAGATGATGAGAAACGTTCTTT
AAATGACAAATTTGGGGAGGCTGGACTTAAAGGTGCTGGTATGGGCATGG
GGGATTTCAGCAATCCTTTCGATTTGTTTGAATCACTATTTGAGGGCACG
GGTGGTATGGGCGGAATGGGGAGCATGGGGAGCAGAGCTTCCAGGAGCAG
AGCAGTTGATGGACAAGATGAATATTACAGCCTTGTCATAAATTTCAAAG
AAGCTGTTTTTGGCGTTGAAAAGGAGATTGAGATAACACGTCTTGAGACC
TGTGGCACTTGCCA
back to top