CN184579

Overview
NameCN184579
Unique NameCN184579
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length664
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_CLOB8 (Chaperone protein dnaJ OS=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 5.372e-25
Identity = 69/161 (42.86%), Postives = 88/161 (54.66%), Query Frame = 3
Query:  213 ADSDYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNK-EPNAEQHLKEISNAYEVLSDDEKRSLNDKFGEAGLKGAGMGMG----------DFSNPFDLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            A+ DYY +LG+ + AS  EIK A+RKLA  YHPD N+    AE+  KEI+ AY+VLSD EK++  D+FG A   G+G G G          D     D+FES F G                   V G D  Y++ + F+EAVFGVEKEI +TR E C  C
Sbjct:    2 ANKDYYELLGLQKGASDDEIKRAFRKLAVKYHPDRNQGNAEAEEKFKEINEAYQVLSDPEKKAKYDQFGSAAFDGSG-GFGGGGFGGFDGFDMGGFGDIFESFFGG--------GGSNSRRRNGPVRGNDIEYTITLTFEEAVFGVEKEISVTRNENCEHC 153          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_CALS8 (Chaperone protein dnaJ OS=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 5.372e-25
Identity = 71/162 (43.83%), Postives = 84/162 (51.85%), Query Frame = 3
Query:  222 DYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNK-EPNAEQHLKEISNAYEVLSDDEKRSLNDKFGEA------GLKGAGMGMG--------DFSNPFDLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            DYY +LGV RNA++ EIK AYR+LA+ YHPD N     AE+  KEI+ AYEVLSD EKR   D+FG A      G +G G   G        DF +  D+FE LFEG                     G D    L +  KE+VFG EKEI I R E C  C
Sbjct:    6 DYYEILGVPRNATQEEIKRAYRRLAKQYHPDANPGNKEAEEKFKEINEAYEVLSDPEKRRKYDQFGHAAFDPTYGAQGGGFSGGFTGGFADFDFGSFGDIFEDLFEGFDIFGSSRRRKEAPR-----KGADIQVDLELTLKESVFGCEKEIPIYRTEKCSVC 162          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_STRA5 (Chaperone protein dnaJ OS=Streptococcus agalactiae serotype V GN=dnaJ PE=3 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 9.164e-25
Identity = 60/159 (37.74%), Postives = 86/159 (54.09%), Query Frame = 3
Query:  216 DSDYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNKEPNAEQHLKEISNAYEVLSDDEKRSLNDKFGEAGLKG----------AGMGMGDFSNPFDLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            ++++Y  LGVS++AS+ EIK AYR++++ YHPD+NKE  AE+  KE+  AYE LSD +KR+  D++G AG  G           G   G F    D+F S F G                     G D  Y + ++F+EA+FG EKE+   R  +C TC
Sbjct:    3 NTEFYDRLGVSKDASQDEIKKAYRRMSKKYHPDINKETGAEEKYKEVQEAYETLSDTQKRAAYDQYGAAGANGGFGGFDGGGFGGFDGGGFGGFEDIFSSFFGGGGMRNPNAPR----------QGDDLQYRVNLSFEEAIFGAEKEVSYNRESSCHTC 151          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_STRA3 (Chaperone protein dnaJ OS=Streptococcus agalactiae serotype III GN=dnaJ PE=3 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 9.164e-25
Identity = 60/159 (37.74%), Postives = 86/159 (54.09%), Query Frame = 3
Query:  216 DSDYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNKEPNAEQHLKEISNAYEVLSDDEKRSLNDKFGEAGLKG----------AGMGMGDFSNPFDLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            ++++Y  LGVS++AS+ EIK AYR++++ YHPD+NKE  AE+  KE+  AYE LSD +KR+  D++G AG  G           G   G F    D+F S F G                     G D  Y + ++F+EA+FG EKE+   R  +C TC
Sbjct:    3 NTEFYDRLGVSKDASQDEIKKAYRRMSKKYHPDINKETGAEEKYKEVQEAYETLSDTQKRAAYDQYGAAGANGGFGGFDGGGFGGFDGGGFGGFEDIFSSFFGGGGMRNPNAPR----------QGDDLQYRVNLSFEEAIFGAEKEVSYNRESSCHTC 151          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_THETN (Chaperone protein dnaJ OS=Thermoanaerobacter tengcongensis GN=dnaJ PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.197e-24
Identity = 65/160 (40.62%), Postives = 82/160 (51.25%), Query Frame = 3
Query:  222 DYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNK-EPNAEQHLKEISNAYEVLSDDEKRSLNDKFGEAGLKGAGMGMG------------DFSNPFDLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            D Y +LGV RNAS+ EIK AYR+LA+ YHPD+N  +  AEQ  KEI+ AYE+LSD +KR+  D+FG A  +  G   G            DF    D+F  +F                       G D  Y L + F+EA FG EKEIE+ R E C  C
Sbjct:    5 DLYEILGVDRNASQEEIKKAYRRLAKKYHPDLNPGDKEAEQKFKEINEAYEILSDPQKRAQYDQFGHAAFEQGGSQQGGFGDFGEGGFDFDFGGFGDIFGDIFS------DFFGTGRRKAEKGPKKGADIRYDLTLTFEEAAFGTEKEIEVERFEVCDVC 158          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_FRATT (Chaperone protein dnaJ OS=Francisella tularensis subsp. tularensis GN=dnaJ PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.197e-24
Identity = 70/150 (46.67%), Postives = 84/150 (56.00%), Query Frame = 3
Query:  225 YYSVLGVSRNASKSEIKSAYRKLARSYHPDVNK-EPNAEQHLKEISNAYEVLSDDEKRSLNDKFGEAGL---KGAGMGMGDFSNPFDLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            YY +L VS+ AS  EIK AYRKLA  YHPD N  +  AE   KEIS AYE+LSDD KRS  D+FG AG+    G G G G F    D+F++ F G                     G D  Y+L I  +EA FGVEKEI I R+E+C +C
Sbjct:    6 YYEILNVSKTASGVEIKRAYRKLAMEYHPDRNPGDKEAEIKFKEISEAYEILSDDSKRSRYDQFGHAGVNQQSGFG-GTGGFGGFEDIFDTFFGGGTSRGSNRSRASR--------GSDLEYTLEITLEEAFFGVEKEITIPRMESCDSC 146          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_FRAT1 (Chaperone protein dnaJ OS=Francisella tularensis subsp. tularensis (strain FSC 198) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.197e-24
Identity = 70/150 (46.67%), Postives = 84/150 (56.00%), Query Frame = 3
Query:  225 YYSVLGVSRNASKSEIKSAYRKLARSYHPDVNK-EPNAEQHLKEISNAYEVLSDDEKRSLNDKFGEAGL---KGAGMGMGDFSNPFDLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            YY +L VS+ AS  EIK AYRKLA  YHPD N  +  AE   KEIS AYE+LSDD KRS  D+FG AG+    G G G G F    D+F++ F G                     G D  Y+L I  +EA FGVEKEI I R+E+C +C
Sbjct:    6 YYEILNVSKTASGVEIKRAYRKLAMEYHPDRNPGDKEAEIKFKEISEAYEILSDDSKRSRYDQFGHAGVNQQSGFG-GTGGFGGFEDIFDTFFGGGTSRGSNRSRASR--------GSDLEYTLEITLEEAFFGVEKEITIPRMESCDSC 146          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_FRAP2 (Chaperone protein dnaJ OS=Francisella philomiragia subsp. philomiragia (strain ATCC 25017) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.563e-24
Identity = 67/149 (44.97%), Postives = 84/149 (56.38%), Query Frame = 3
Query:  225 YYSVLGVSRNASKSEIKSAYRKLARSYHPDVN-KEPNAEQHLKEISNAYEVLSDDEKRSLNDKFGEAGL--KGAGMGMGDFSNPFDLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            YY +L VS+ AS  EIK AYRKLA  YHPD N  +  AE   KEIS AYE+LSDD KRS  D+FG AG+  +G     G F    D+F++ F G                     G D  Y++ I+ +EA FGVEKEI I R+E+C +C
Sbjct:    6 YYEILNVSKTASGVEIKRAYRKLAMKYHPDRNPDDKEAEIKFKEISEAYEILSDDGKRSRYDQFGHAGVNQQGGAGSAGGFGGFEDIFDTFFGGGTSRGSNRSRASR--------GSDLEYTIEISLEEAFFGVEKEINIPRMESCDSC 146          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_SERP5 (Chaperone protein dnaJ OS=Serratia proteamaculans (strain 568) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 2.042e-24
Identity = 64/158 (40.51%), Postives = 88/158 (55.70%), Query Frame = 3
Query:  213 ADSDYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNKEPNAEQHLKEISNAYEVLSDDEKRSLNDKFGEAGLKGAGMGMG-------DFSNPF-DLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            A  DYY +LGVS+ A + EIK AY++LA  +HPD N+E +AE   KEI  AYE+L+D +KR+  D++G A  +  GMG G       +FS+ F D+F  +F G                     G D  Y++ ++ +EAV GV KEI I  LE CG C
Sbjct:    2 AKKDYYEILGVSKTAEEREIKKAYKRLAMKFHPDRNQEQDAEARFKEIKEAYEILTDAQKRAAYDQYGHAAFEQGGMGGGGGFGGGAEFSDIFGDVFGDIFGGGRRQRASR-------------GSDLRYNMELSLEEAVRGVTKEIRIPTLEECGVC 146          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_OPITP (Chaperone protein dnaJ OS=Opitutus terrae (strain DSM 11246 / PB90-1) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 2.042e-24
Identity = 66/161 (40.99%), Postives = 83/161 (51.55%), Query Frame = 3
Query:  213 ADSDYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNK-EPNAEQHLKEISNAYEVLSDDEKRSLNDKFGEAGLKGAGMGM--------GDFSNPFDLFESLF--EGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            A  DYY +LGV + AS+ E+K AYRK A  YHPD N     AE+  K+IS+AYEVL D EKR+  D++G A  +GAG G         G F +PFD+F  +F  +G                    DG D  Y L I  +EA  G EKEI   +L  C  C
Sbjct:    2 AKDDYYELLGVQKGASEEELKKAYRKKAVQYHPDKNPGNKEAEEMFKKISHAYEVLKDPEKRAAYDRYGPAAFEGAGAGAGMGGMRGGGGFHDPFDIFREVFGQQGGMGGGIFEEMFGGGRGGGGQDGADLRYDLEITLEEAARGAEKEISFRKLVACERC 162          
The following BLAST results are available for this feature:
BLAST of CN184579 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAJ_CLOB85.372e-2542.86Chaperone protein dnaJ OS=Clostridium beijerinckii... [more]
DNAJ_CALS85.372e-2543.83Chaperone protein dnaJ OS=Caldicellulosiruptor sac... [more]
DNAJ_STRA59.164e-2537.74Chaperone protein dnaJ OS=Streptococcus agalactiae... [more]
DNAJ_STRA39.164e-2537.74Chaperone protein dnaJ OS=Streptococcus agalactiae... [more]
DNAJ_THETN1.197e-2440.63Chaperone protein dnaJ OS=Thermoanaerobacter tengc... [more]
DNAJ_FRATT1.197e-2446.67Chaperone protein dnaJ OS=Francisella tularensis s... [more]
DNAJ_FRAT11.197e-2446.67Chaperone protein dnaJ OS=Francisella tularensis s... [more]
DNAJ_FRAP21.563e-2444.97Chaperone protein dnaJ OS=Francisella philomiragia... [more]
DNAJ_SERP52.042e-2440.51Chaperone protein dnaJ OS=Serratia proteamaculans ... [more]
DNAJ_OPITP2.042e-2440.99Chaperone protein dnaJ OS=Opitutus terrae (strain ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0005L18_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0005L18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184579 ID=CN184579; Name=CN184579; organism=Citrus sinensis; type=EST; length=664bp
GAGGGTCCACTTTTCACTTCTTTGACCACAATTGCCCTTATGCCAGTTGG
GGAGGGAAAAGAGGCCTGCTGCAAGAAGACATCGCAAGCAGGTTAAGCTG
TCTGGCTGCTCCAAGTTCAAGCTTTTTTTCACGCGATTCCTTCTCTTTGT
TTTCTTATGCTAGTCCATCTCAGACTTCATACCGTCGTAGGGGAGCACGA
TTGATCGTTAGAGCTGATAGTGACTACTATTCAGTTCTAGGGGTGTCAAG
AAATGCAAGTAAATCTGAAATTAAAAGCGCTTATCGGAAGCTTGCAAGGA
GTTATCACCCGGATGTAAACAAAGAACCTAATGCAGAACAGCATCTCAAG
GAAATTAGCAATGCATATGAGGTTCTGTCAGATGATGAGAAACGTTCTTT
AAATGACAAATTTGGGGAGGCTGGACTTAAAGGTGCTGGTATGGGCATGG
GGGATTTCAGCAATCCTTTCGATTTGTTTGAATCACTATTTGAGGGCACG
GGTGGTATGGGCGGAATGGGGAGCATGGGGAGCAGAGCTTCCAGGAGCAG
AGCAGTTGATGGACAAGATGAATATTACAGCCTTGTCATAAATTTCAAAG
AAGCTGTTTTTGGCGTTGAAAAGGAGATTGAGATAACACGTCTTGAGACC
TGTGGCACTTGCCA
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