CN184579

Overview
NameCN184579
Unique NameCN184579
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length664
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_METFK (Chaperone protein dnaJ OS=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 2.666e-24
Identity = 66/154 (42.86%), Postives = 83/154 (53.90%), Query Frame = 3
Query:  213 ADSDYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNKE-PNAEQHLKEISNAYEVLSDDEKRSLNDKFGEAGL---KGAGMGMGDFSNPFDLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            A  DYY VLGV+R+A+  EIK AYRKLA  YHPD N + P AE+H KE   AYEVLSDD+KR+  D++G AG+     AG G G F N  D F  +F                       G D  Y++ I+ +EA  G E +I I  +  C TC
Sbjct:    2 AKRDYYEVLGVNRDATDEEIKKAYRKLAMKYHPDRNPDNPKAEEHFKEAKEAYEVLSDDQKRAAYDQYGHAGVDPSAAAGAGAGGFGNFADAFGDIF------GDIFGGGGGGRRSNVYRGADLRYNMEISLEEAARGTETKIRIPVMAECETC 149          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_GEOSL (Chaperone protein dnaJ OS=Geobacter sulfurreducens GN=dnaJ PE=3 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 3.482e-24
Identity = 66/158 (41.77%), Postives = 86/158 (54.43%), Query Frame = 3
Query:  222 DYYSVLGVSRNASKSEIKSAYRKLARSYHPDVN-KEPNAEQHLKEISNAYEVLSDDEKRSLNDKFGEAGLKGAGMGMGDF-----SNPF-----DLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            DYY VLGV +NAS +EIK A+RKLA  YHPD N  +  AE+  KEI+ AYEVLSD +KR+  D+FG AG+   G   G F       PF     D+F  +F G                     G D  Y++ ++F+EA FG EKEI++   + CG C
Sbjct:    7 DYYEVLGVHKNASDTEIKKAFRKLAIQYHPDKNPDDKEAEEKFKEITEAYEVLSDPQKRAQYDQFGHAGVGAGGFSGGGFGGFGAGTPFGDIFGDIFGDIFGGRPRGSRGRR------------GDDLQYNMELSFEEAAFGAEKEIQVPYGKRCGDC 152          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_CHRVO (Chaperone protein dnaJ OS=Chromobacterium violaceum GN=dnaJ PE=3 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 3.482e-24
Identity = 64/154 (41.56%), Postives = 82/154 (53.25%), Query Frame = 3
Query:  222 DYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNKE-PNAEQHLKEISNAYEVLSDDEKRSLNDKFG------EAGLKGAGMGMGDFSNPFDLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            DYY VLGV+R+AS  +IK AYRKLA  YHPD N +   AE   KE+  AYE+LSD +KR   D+FG      +AG+ G G G G F +  D+F  +F G                     G D  Y++ I  +EA  G EK+I I   E+C TC
Sbjct:    5 DYYDVLGVNRDASDDDIKKAYRKLAMKYHPDRNPDSKEAEDKFKEVKEAYEILSDSQKRGAYDQFGHAGVDPQAGMGGGGQGFGGFGDFADIFSDIFGG-------GRGGSGGGRSNVYRGADLRYNMEITLEEAARGCEKQIRIPSHESCSTC 151          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_BREBN (Chaperone protein dnaJ OS=Brevibacillus brevis (strain 47 / JCM 6285 / NBRC 100599) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 3.482e-24
Identity = 64/154 (41.56%), Postives = 86/154 (55.84%), Query Frame = 3
Query:  222 DYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNKEPNAEQHLKEISNAYEVLSDDEKRSLNDKFG----EAGLKGAGM---GMGDFSNPFDLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            D Y VLGV+++A   EIK AYRKLAR YHPDVNKE +AE+  KE+ +AY++LS+ +KR+  D+FG      G  G G    GMG F + FD+F   F G                     G D  + L I+F +A+FG E ++EI +   C TC
Sbjct:    4 DLYEVLGVAKDADADEIKKAYRKLARQYHPDVNKEADAEEKFKEVKDAYDILSEPQKRAQYDRFGHQDPNQGFGGGGFDGSGMGGFGDIFDMF---FGGNGRRANPNAPR---------KGSDLQFGLSIDFIDAIFGKETDVEIPKEAECDTC 145          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_BRECH (Chaperone protein dnaJ OS=Brevibacillus choshinensis GN=dnaJ PE=3 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 4.548e-24
Identity = 66/154 (42.86%), Postives = 81/154 (52.60%), Query Frame = 3
Query:  222 DYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNKEPNAEQHLKEISNAYEVLSDDEKRSLNDKFG----EAGLKGAGM---GMGDFSNPFDLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            DYY VLGV + A   EIK AYRKLAR YHPDVNK  +AE+  KE+  AY+VLS+ +KR+  D+FG      G  G G    GMG F + FD+F   F G                     G D  + L I F E VFG E ++EI +   C TC
Sbjct:    4 DYYEVLGVGKGADADEIKKAYRKLARQYHPDVNKAADAEEKFKEVKEAYDVLSEPQKRAQYDRFGHQDPNQGFGGGGFDASGMGGFGDIFDMF---FGGGGRRANPNAPR---------KGSDLQFGLSIEFTETVFGKETDVEIPKEAECDTC 145          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_FRATW (Chaperone protein dnaJ OS=Francisella tularensis subsp. tularensis (strain WY96-3418) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 5.940e-24
Identity = 67/147 (45.58%), Postives = 81/147 (55.10%), Query Frame = 3
Query:  225 YYSVLGVSRNASKSEIKSAYRKLARSYHPDVNK-EPNAEQHLKEISNAYEVLSDDEKRSLNDKFGEAGLKGAGMGMGDFSNPFDLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            YY +L VS+ AS  EIK AYRKLA  YHPD N  +  AE   KEIS AYE+LSDD KRS  D+FG AG+     G G      D+F++ F G                     G D  Y+L I  +EA FGVEKEI I R+E+C +C
Sbjct:    6 YYEILNVSKTASGVEIKRAYRKLAMEYHPDRNPGDKEAEIKFKEISEAYEILSDDSKRSRYDQFGHAGVNQQS-GFGGTGGFEDIFDTFFGGGTSRGSNRSRASR--------GSDLEYTLEITLEEAFFGVEKEITIPRMESCDSC 143          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_CLOK5 (Chaperone protein dnaJ OS=Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 5.940e-24
Identity = 66/158 (41.77%), Postives = 87/158 (55.06%), Query Frame = 3
Query:  213 ADSDYYSVLGVSRNASKSEIKSAYRKLARSYHPDVN-KEPNAEQHLKEISNAYEVLSDDEKRSLNDKFGEAGLKGAGMGMG----DFSNP---FDLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            A  DYY +LG+ + AS  +IK A+RKLA  YHPD N  +  AE+  KEI+ AY+VL+D +K++  D+FG     G G   G    DFS+     D+F+S F G                     G D  Y+L + F+EAVFGVEKEI +TR E C TC
Sbjct:    2 AKKDYYEILGLDKGASDQDIKKAFRKLALKYHPDRNPNDKKAEEKFKEINEAYQVLTDPQKKAQYDQFGTTDFNGGGFQGGFGGFDFSDLGGFGDIFDSFFGGGFSSGRRKNGPER--------GSDLEYTLSLTFEEAVFGVEKEISVTRNERCETC 151          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_ACHLA (Chaperone protein dnaJ OS=Acholeplasma laidlawii GN=dnaJ PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 5.940e-24
Identity = 61/155 (39.35%), Postives = 81/155 (52.26%), Query Frame = 3
Query:  213 ADSDYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNKEPNAEQHLKEISNAYEVLSDDEKRSLNDKFGEAG-----LKGAGMGMGDFSNPFDLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            A  DYY VLG+S++AS+ EIK AYR LA+ YHPDV+KE +AE   KE+  AY+VL+D  K++  D+FG AG       GAG G G F    D+    F G                     G+D    + I+F EAV G  K + +   + CG C
Sbjct:    2 AKRDYYDVLGISKSASQDEIKKAYRSLAKKYHPDVSKEKDAETKFKEVQEAYDVLNDSNKKAQYDRFGHAGTGQDPFGGAGGGFGGFGGFDDIISQFFGGGQTRRTRQTSNV---------GEDLNMRMTIDFMEAVLGTTKNVSVDITQDCGHC 147          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_THIDA (Chaperone protein dnaJ OS=Thiobacillus denitrificans (strain ATCC 25259) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 7.758e-24
Identity = 68/155 (43.87%), Postives = 83/155 (53.55%), Query Frame = 3
Query:  222 DYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNK-EPNAEQHLKEISNAYEVLSDDEKRSLNDKFGEA------GLKGAGMGMGDFSNPF-DLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            DYY VLGV++NAS  EIK AYRKLA  +HPD N  +  AE   KE   AYE+LSD +KR+  D+FG A      G+ G G G G FS+ F D+F  +F G                     G D  Y+L I  +EA  G E +I I  LE CGTC
Sbjct:    5 DYYEVLGVAKNASDEEIKKAYRKLAMKHHPDRNPGDHAAEDKFKEAKQAYEILSDSDKRAAYDQFGHAGVDPQSGMGGGGFGGGGFSDAFSDIFGDIFGG----------GGGNRRDRVYRGADLRYNLEIGLEEAARGTETKIRIPTLEECGTC 149          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_FRATU (Chaperone protein dnaJ OS=Francisella tularensis GN=dnaJ PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 7.758e-24
Identity = 66/147 (44.90%), Postives = 81/147 (55.10%), Query Frame = 3
Query:  225 YYSVLGVSRNASKSEIKSAYRKLARSYHPDVNK-EPNAEQHLKEISNAYEVLSDDEKRSLNDKFGEAGLKGAGMGMGDFSNPFDLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            YY +L +S+ AS  EIK AYRKLA  YHPD N  +  AE   KEIS AYE+LSDD KRS  D+FG AG+     G G      D+F++ F G                     G D  Y+L I  +EA FGVEKEI I R+E+C +C
Sbjct:    6 YYEILNISKTASGVEIKRAYRKLAMKYHPDRNPGDKEAEIKFKEISEAYEILSDDSKRSRYDQFGHAGVNQQS-GFGGTGGFEDIFDTFFGGGTSRGSNRSRASR--------GSDLEYTLEITLEEAFFGVEKEITIPRMESCDSC 143          
The following BLAST results are available for this feature:
BLAST of CN184579 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAJ_METFK2.666e-2442.86Chaperone protein dnaJ OS=Methylobacillus flagella... [more]
DNAJ_GEOSL3.482e-2441.77Chaperone protein dnaJ OS=Geobacter sulfurreducens... [more]
DNAJ_CHRVO3.482e-2441.56Chaperone protein dnaJ OS=Chromobacterium violaceu... [more]
DNAJ_BREBN3.482e-2441.56Chaperone protein dnaJ OS=Brevibacillus brevis (st... [more]
DNAJ_BRECH4.548e-2442.86Chaperone protein dnaJ OS=Brevibacillus choshinens... [more]
DNAJ_FRATW5.940e-2445.58Chaperone protein dnaJ OS=Francisella tularensis s... [more]
DNAJ_CLOK55.940e-2441.77Chaperone protein dnaJ OS=Clostridium kluyveri (st... [more]
DNAJ_ACHLA5.940e-2439.35Chaperone protein dnaJ OS=Acholeplasma laidlawii G... [more]
DNAJ_THIDA7.758e-2443.87Chaperone protein dnaJ OS=Thiobacillus denitrifica... [more]
DNAJ_FRATU7.758e-2444.90Chaperone protein dnaJ OS=Francisella tularensis G... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS04_0005L18_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0005L18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184579 ID=CN184579; Name=CN184579; organism=Citrus sinensis; type=EST; length=664bp
GAGGGTCCACTTTTCACTTCTTTGACCACAATTGCCCTTATGCCAGTTGG
GGAGGGAAAAGAGGCCTGCTGCAAGAAGACATCGCAAGCAGGTTAAGCTG
TCTGGCTGCTCCAAGTTCAAGCTTTTTTTCACGCGATTCCTTCTCTTTGT
TTTCTTATGCTAGTCCATCTCAGACTTCATACCGTCGTAGGGGAGCACGA
TTGATCGTTAGAGCTGATAGTGACTACTATTCAGTTCTAGGGGTGTCAAG
AAATGCAAGTAAATCTGAAATTAAAAGCGCTTATCGGAAGCTTGCAAGGA
GTTATCACCCGGATGTAAACAAAGAACCTAATGCAGAACAGCATCTCAAG
GAAATTAGCAATGCATATGAGGTTCTGTCAGATGATGAGAAACGTTCTTT
AAATGACAAATTTGGGGAGGCTGGACTTAAAGGTGCTGGTATGGGCATGG
GGGATTTCAGCAATCCTTTCGATTTGTTTGAATCACTATTTGAGGGCACG
GGTGGTATGGGCGGAATGGGGAGCATGGGGAGCAGAGCTTCCAGGAGCAG
AGCAGTTGATGGACAAGATGAATATTACAGCCTTGTCATAAATTTCAAAG
AAGCTGTTTTTGGCGTTGAAAAGGAGATTGAGATAACACGTCTTGAGACC
TGTGGCACTTGCCA
back to top