CN184579

Overview
NameCN184579
Unique NameCN184579
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length664
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_PROMP (Chaperone protein dnaJ OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 6.552e-31
Identity = 74/150 (49.33%), Postives = 91/150 (60.67%), Query Frame = 3
Query:  219 SDYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNKEPNAEQHLKEISNAYEVLSDDEKRSLNDKFGEAGLKG-AGM-GMGDFSNPFDLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            +D+Y +LGVSR+A  + +KSAYRKLAR YHPDVNK+P AE   KEI  AYE L+D E R+  D+FGEAG+ G AGM  MGD     DLFE+ F G                     G D  Y L I+FK+A+FG ++EI I  LETC  C
Sbjct:    2 ADFYQILGVSRDADANTLKSAYRKLARQYHPDVNKDPGAEDKFKEIGKAYEALADPETRARYDQFGEAGIGGAAGMPDMGDMGGFGDLFETFFNG---FGGQSSQGGRSQRRGPQQGDDLRYDLNIDFKDAIFGQQREINIPHLETCEVC 148          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_GEOKA (Chaperone protein dnaJ OS=Geobacillus kaustophilus GN=dnaJ PE=3 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 6.552e-31
Identity = 76/159 (47.80%), Postives = 90/159 (56.60%), Query Frame = 3
Query:  213 ADSDYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNKEPNAEQHLKEISNAYEVLSDDEKRSLNDKFGEA---------GLKGAGMGMGDFSNPFDLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            A  DYY +LGVS+NA+K EIK AYRKL++ YHPDVNK P+A +  KEI  AYEVLSDDEKR+  D+FG A         G +G G   G FS  F  FE +FE                      G D  Y + + F+EA FG E EIEI R ETC TC
Sbjct:    2 AKRDYYEILGVSKNATKDEIKKAYRKLSKQYHPDVNKAPDAAEKFKEIKEAYEVLSDDEKRARYDRFGHADPNETFGGGGFQGGGFDFGGFSG-FGGFEDIFE------TFFGAGPRRRASGPRKGADVEYMMTLTFEEAAFGKETEIEIPREETCDTC 153          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_PROMM (Chaperone protein dnaJ OS=Prochlorococcus marinus (strain MIT 9313) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 8.557e-31
Identity = 74/150 (49.33%), Postives = 91/150 (60.67%), Query Frame = 3
Query:  219 SDYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNKEPNAEQHLKEISNAYEVLSDDEKRSLNDKFGEAGLKG-AGM-GMGDFSNPFDLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            +DYY +LGVS++A    +K AYR+LAR YHPD+NK+P AE   KEI  AYEVLSD + R   D+FGEAGL G AGM  +GD     DLFE+ F G                     G D  Y L I+F++AVFG E+EI+I  LETC TC
Sbjct:    2 ADYYDLLGVSKDADGDTLKRAYRRLARQYHPDINKDPGAEDRFKEIGRAYEVLSDPQTRGRYDQFGEAGLGGAAGMPDVGDMGGFADLFETFFSG--FGGAGGSGGARPRRRGPQQGDDLRYDLKIDFEQAVFGQEREIKIPHLETCDTC 149          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ1_SYNY3 (Chaperone protein dnaJ 1 OS=Synechocystis sp. (strain PCC 6803) GN=dnaJ1 PE=3 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 2.490e-30
Identity = 74/153 (48.37%), Postives = 90/153 (58.82%), Query Frame = 3
Query:  222 DYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNKEPNAEQHLKEISNAYEVLSDDEKRSLNDKFGEAGLKGAGM------GMGDFSNPFDLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            DYY  LGV+R+A K EIK AYR+LAR YHPDVNKEP AE+  KEI+ AYEVLS+ E R   D+FGEAG+ G G        MGDF+   D+FE++F G                     G D    L + F+EA+FG EKEI I  LE+C  C
Sbjct:    4 DYYQTLGVTRDADKDEIKRAYRRLARKYHPDVNKEPGAEEKFKEINRAYEVLSEPEIRQRYDQFGEAGVSGGGAQGFDVGNMGDFA---DIFETIF-GGFGGGMGGQQRGRRRANGPTRGDDLRLDLQLTFQEAIFGGEKEIRIPHLESCQVC 152          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_GEOTN (Chaperone protein dnaJ OS=Geobacillus thermodenitrificans (strain NG80-2) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 3.252e-30
Identity = 74/158 (46.84%), Postives = 89/158 (56.33%), Query Frame = 3
Query:  213 ADSDYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNKEPNAEQHLKEISNAYEVLSDDEKRSLNDKFGEA--------GLKGAGMGMGDFSNPFDLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            A  DYY VLGVS+NA+K EIK AYRKL++ YHPD+NK P+A +  KEI  AYEVLSDDEKR+  D+FG A        G +G G   G FS  F  FE +FE                      G D  Y + + F+EA FG E EIE+   ETC TC
Sbjct:    2 AKRDYYEVLGVSKNATKDEIKKAYRKLSKQYHPDINKAPDAAEKFKEIKEAYEVLSDDEKRARYDRFGHADPNEAFGGGFQGGGFDFGGFSG-FGGFEDIFE------TFFGGGSRRRASGPRKGADLEYMMTLTFEEAAFGKETEIEVPHEETCDTC 152          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_ACAM1 (Chaperone protein dnaJ OS=Acaryochloris marina (strain MBIC 11017) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 5.547e-30
Identity = 71/151 (47.02%), Postives = 90/151 (59.60%), Query Frame = 3
Query:  222 DYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNKEPNAEQHLKEISNAYEVLSDDEKRSLNDKFGEAGLK---GAG-MGMGDFSNPFDLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            DYY +LGVSR+A   E+K +YR+LAR YHPDVNKEP AE   KEI+ AYE LSD + R   D+FGEAG+    GAG    GDF    D+FE+ F G                     G+D  + L + F+EAVFG E++I I+ LE+C TC
Sbjct:    4 DYYDILGVSRSADPDELKRSYRRLARKYHPDVNKEPGAEDKFKEINKAYETLSDPQMRGRYDQFGEAGVSSAAGAGYQDFGDFGGFADIFETFFSG-----FGGSPQSGRRRSGPARGEDLRFDLKLKFREAVFGGEQQIRISHLESCKTC 149          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_STAES (Chaperone protein dnaJ OS=Staphylococcus epidermidis (strain ATCC 12228) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 7.244e-30
Identity = 72/154 (46.75%), Postives = 90/154 (58.44%), Query Frame = 3
Query:  213 ADSDYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNKEPNAEQHLKEISNAYEVLSDDEKRSLNDKFGEAGLKGA----GMGMGDFSNPFDLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            A  DYY VLGV+++ASK EIK AYRKL++ YHPD+NKE  A++  KEIS AYEVLSD+ KR+  D+FG  G +G     G G  DF    D+F S F G                     G D  Y++ I F+EAVFG +KEI I +  TC TC
Sbjct:    2 AKRDYYEVLGVNKSASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDENKRANYDQFGHDGPQGGFGSQGFGGSDFGGFEDIFSSFFGGGSRQRDPNAPR---------KGDDLQYTMTITFEEAVFGTKKEISIKKDVTCHTC 146          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_CARHZ (Chaperone protein dnaJ OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 7.244e-30
Identity = 74/152 (48.68%), Postives = 89/152 (58.55%), Query Frame = 3
Query:  222 DYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNK-EPNAEQHLKEISNAYEVLSDDEKRSLNDKFGEAGLKGAGMGMGDFSNPFDL-FESLFE---GTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            DYY +LGV+RNA+  EIK AYRKLAR YHPDVNK +PNA +  KEI+ AYEVLSD EKR+  D+FG AG+ G   G G F     + FE +F    G                   V G D    L +  +EAVFG EKE+ +TR ETCG C
Sbjct:    4 DYYEILGVARNATPEEIKKAYRKLARKYHPDVNKDDPNAAEKFKEINEAYEVLSDPEKRARYDQFGHAGVDGNFAGQGGFGGGAGINFEDIFSGFGGFGDLFDMVFGSGRKARQGPVPGDDIEAVLELTLEEAVFGGEKELRVTRTETCGHC 155          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_MACCJ (Chaperone protein dnaJ OS=Macrococcus caseolyticus (strain JCSC5402) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 9.461e-30
Identity = 71/154 (46.10%), Postives = 91/154 (59.09%), Query Frame = 3
Query:  213 ADSDYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNKEPNAEQHLKEISNAYEVLSDDEKRSLNDKFGEAGL-KGAGMG---MGDFSNPFDLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            A  DYY VLG+S+ ASK EIK AY+KL++ YHPD+NKE +AE   KEI+ AYEVLSDD+K++  D+FG AG+ +GAG G    G F    D+F S F G                     G D  Y + + F+EAVFG EKEI + +   C TC
Sbjct:    2 AKRDYYEVLGLSKGASKEEIKRAYKKLSKKYHPDINKEADAEDKFKEIAEAYEVLSDDQKKAQYDQFGHAGMGQGAGFGGQDFGGFGGFEDIFSSFFGGGARRDPNAPR----------QGNDLQYQMNVTFEEAVFGAEKEISVKKEVECDTC 145          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_STAEQ (Chaperone protein dnaJ OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 1.614e-29
Identity = 72/154 (46.75%), Postives = 89/154 (57.79%), Query Frame = 3
Query:  213 ADSDYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNKEPNAEQHLKEISNAYEVLSDDEKRSLNDKFGEAGLKGA----GMGMGDFSNPFDLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            A  DYY VLGV+++ASK EIK AYRKL++ YHPD+NKE  A++  KEIS AYEVLSD+ KR   D+FG  G +G     G G  DF    D+F S F G                     G D  Y++ I F+EAVFG +KEI I +  TC TC
Sbjct:    2 AKRDYYEVLGVNKSASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDENKRVNYDQFGHDGPQGGFGSQGFGGSDFGGFEDIFSSFFGGGSRQRDPNAPR---------KGDDLQYTMTITFEEAVFGTKKEISIKKDVTCHTC 146          
The following BLAST results are available for this feature:
BLAST of CN184579 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAJ_PROMP6.552e-3149.33Chaperone protein dnaJ OS=Prochlorococcus marinus ... [more]
DNAJ_GEOKA6.552e-3147.80Chaperone protein dnaJ OS=Geobacillus kaustophilus... [more]
DNAJ_PROMM8.557e-3149.33Chaperone protein dnaJ OS=Prochlorococcus marinus ... [more]
DNAJ1_SYNY32.490e-3048.37Chaperone protein dnaJ 1 OS=Synechocystis sp. (str... [more]
DNAJ_GEOTN3.252e-3046.84Chaperone protein dnaJ OS=Geobacillus thermodenitr... [more]
DNAJ_ACAM15.547e-3047.02Chaperone protein dnaJ OS=Acaryochloris marina (st... [more]
DNAJ_STAES7.244e-3046.75Chaperone protein dnaJ OS=Staphylococcus epidermid... [more]
DNAJ_CARHZ7.244e-3048.68Chaperone protein dnaJ OS=Carboxydothermus hydroge... [more]
DNAJ_MACCJ9.461e-3046.10Chaperone protein dnaJ OS=Macrococcus caseolyticus... [more]
DNAJ_STAEQ1.614e-2946.75Chaperone protein dnaJ OS=Staphylococcus epidermid... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0005L18_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0005L18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184579 ID=CN184579; Name=CN184579; organism=Citrus sinensis; type=EST; length=664bp
GAGGGTCCACTTTTCACTTCTTTGACCACAATTGCCCTTATGCCAGTTGG
GGAGGGAAAAGAGGCCTGCTGCAAGAAGACATCGCAAGCAGGTTAAGCTG
TCTGGCTGCTCCAAGTTCAAGCTTTTTTTCACGCGATTCCTTCTCTTTGT
TTTCTTATGCTAGTCCATCTCAGACTTCATACCGTCGTAGGGGAGCACGA
TTGATCGTTAGAGCTGATAGTGACTACTATTCAGTTCTAGGGGTGTCAAG
AAATGCAAGTAAATCTGAAATTAAAAGCGCTTATCGGAAGCTTGCAAGGA
GTTATCACCCGGATGTAAACAAAGAACCTAATGCAGAACAGCATCTCAAG
GAAATTAGCAATGCATATGAGGTTCTGTCAGATGATGAGAAACGTTCTTT
AAATGACAAATTTGGGGAGGCTGGACTTAAAGGTGCTGGTATGGGCATGG
GGGATTTCAGCAATCCTTTCGATTTGTTTGAATCACTATTTGAGGGCACG
GGTGGTATGGGCGGAATGGGGAGCATGGGGAGCAGAGCTTCCAGGAGCAG
AGCAGTTGATGGACAAGATGAATATTACAGCCTTGTCATAAATTTCAAAG
AAGCTGTTTTTGGCGTTGAAAAGGAGATTGAGATAACACGTCTTGAGACC
TGTGGCACTTGCCA
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