CN184579

Overview
NameCN184579
Unique NameCN184579
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length664
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_LYSSC (Chaperone protein dnaJ OS=Lysinibacillus sphaericus (strain C3-41) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 2.108e-29
Identity = 71/151 (47.02%), Postives = 91/151 (60.26%), Query Frame = 3
Query:  222 DYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNKEPNAEQHLKEISNAYEVLSDDEKRSLNDKFG----EAGLKGAGMGMGDFSNPFDLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            DYY VLG++++A+K EIK AYRKL++ YHPD+NKEP A++  KEI+ AYEVLSDD+K++  D+FG     AG  G G G G F    D+F S F G                     G D  Y + I F+EA+FG E EIEI + ETC TC
Sbjct:    5 DYYEVLGLTKSATKDEIKKAYRKLSKQYHPDLNKEPGADEKFKEIAEAYEVLSDDQKKARYDQFGHEDPNAGF-GGGFGGGGFGGFEDIFSSFFGGGGRRQDPNAPR---------KGDDLQYRMNIKFEEAIFGKETEIEIPKDETCETC 145          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_BACTR (Chaperone protein dnaJ OS=Bacillus thermoglucosidasius GN=dnaJ PE=3 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 2.753e-29
Identity = 73/160 (45.62%), Postives = 91/160 (56.88%), Query Frame = 3
Query:  213 ADSDYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNKEPNAEQHLKEISNAYEVLSDDEKRSLNDKFGEA----GLKGAGM------GMGDFSNPFDLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            A  DYY +LGVS+NA+K EIK AYRKL++ YHPD+NKEP+A +  KEI  AYEVLSDD+KR+  D+FG A    G  G         G   FS   D+F + F G                     G D  Y++ + F+EAVFG E +IEI R ETC TC
Sbjct:    2 AKRDYYEILGVSKNATKEEIKKAYRKLSKKYHPDINKEPDAAEKFKEIKEAYEVLSDDQKRAHYDQFGHADPNQGFGGFRSDDFDFGGFSGFSGFDDIFSTFFGGGRRRDPNAPRA----------GADLQYTMTLTFEEAVFGKETDIEIPREETCNTC 151          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_OCEIH (Chaperone protein dnaJ OS=Oceanobacillus iheyensis GN=dnaJ PE=3 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 6.133e-29
Identity = 67/152 (44.08%), Postives = 90/152 (59.21%), Query Frame = 3
Query:  222 DYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNKEPNAEQHLKEISNAYEVLSDDEKRSLNDKFGEA-----GLKGAGMGMGDFSNPFDLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            DYY +LG+ ++AS+ EIK  YRKLAR YHPDVNKE +A +  KE+  AYEVLSDD+KR+  D+FG +     G  G G G  DF    D+F+  F G                     G D  Y+++++F+EAVFG E +IEI + E+C TC
Sbjct:    5 DYYEILGIDKSASQDEIKKNYRKLARKYHPDVNKEADAAEKFKEVKEAYEVLSDDQKRAQYDQFGHSGPQSQGFGGFGGGAQDFGGFGDIFDMFFGG---------GGRSRDPNAPQQGNDLQYTMILDFEEAVFGKETDIEIPKEESCDTC 147          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_LISW6 (Chaperone protein dnaJ OS=Listeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 8.009e-29
Identity = 70/157 (44.59%), Postives = 89/157 (56.69%), Query Frame = 3
Query:  213 ADSDYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNKEPNAEQHLKEISNAYEVLSDDEKRSLNDKFGE-------AGLKGAGMGMGDFSNPFDLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            A  DYY VLG+S++AS  EIK AYRKL++ YHPD+NKE  A++  KEIS AYEVLSD +KR+  D++G         G  G G   G FS   D+F++ F G                     G D  Y++ + FKEAVFG + EIEI R E C TC
Sbjct:    2 AKRDYYEVLGISKSASADEIKKAYRKLSKQYHPDINKEAGADEKFKEISEAYEVLSDSQKRAQYDQYGHVDPNQGFGGGAGGGFSGGGFSGFEDIFDTFFGGGGRQQDPNAPR---------QGSDLQYTMRLKFKEAVFGKDAEIEIPREENCDTC 149          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_LISMH (Chaperone protein dnaJ OS=Listeria monocytogenes serotype 4a (strain HCC23) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 8.009e-29
Identity = 69/157 (43.95%), Postives = 89/157 (56.69%), Query Frame = 3
Query:  213 ADSDYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNKEPNAEQHLKEISNAYEVLSDDEKRSLNDKFGE-------AGLKGAGMGMGDFSNPFDLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            A  DYY VLG+S++AS  EIK AYRKL++ YHPD+NKE  A++  KEIS AYE LSD +KR+  D++G         G  G G G G FS   D+F++ F G                     G D  Y++ + FKEA+FG + EIEI R E C TC
Sbjct:    2 AKRDYYEVLGISKSASADEIKKAYRKLSKQYHPDINKEAGADEKFKEISEAYEALSDPQKRAQYDQYGHVDPNQGFGGGAGGGFGGGGFSGFEDIFDTFFGGGGRQQDPNAPR---------QGSDLQYTMRLKFKEAIFGKDAEIEIPREENCDTC 149          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_LISIN (Chaperone protein dnaJ OS=Listeria innocua GN=dnaJ PE=3 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 8.009e-29
Identity = 69/157 (43.95%), Postives = 89/157 (56.69%), Query Frame = 3
Query:  213 ADSDYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNKEPNAEQHLKEISNAYEVLSDDEKRSLNDKFGE-------AGLKGAGMGMGDFSNPFDLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            A  DYY VLG+S++AS  EIK AYRKL++ YHPD+NKE  A++  KEIS AYE LSD +KR+  D++G         G  G G G G FS   D+F++ F G                     G D  Y++ + FKEA+FG + EIEI R E C TC
Sbjct:    2 AKRDYYEVLGISKSASADEIKKAYRKLSKQYHPDINKEAGADEKFKEISEAYEALSDPQKRAQYDQYGHVDPNQGFGGGAGGGFGGGGFSGFEDIFDTFFGGGGRQQDPNAPR---------QGSDLQYTMRLKFKEAIFGKDAEIEIPREENCDTC 149          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_GEOSW (Chaperone protein dnaJ OS=Geobacillus sp. (strain WCH70) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 8.009e-29
Identity = 71/157 (45.22%), Postives = 89/157 (56.69%), Query Frame = 3
Query:  213 ADSDYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNKEPNAEQHLKEISNAYEVLSDDEKRSLNDKFGEA-------GLKGAGMGMGDFSNPFDLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            A  DYY +LGVS+NA+K EIK AYRKL++ YHPD+NKEP+A +  KEI  AYEVLSDD+KR+  D+FG A       G +      G FS  F  FE +F                       G D  Y++ + F+EA FG E +IEI R ETC TC
Sbjct:    2 AKRDYYEILGVSKNATKEEIKKAYRKLSKKYHPDINKEPDAAEKFKEIKEAYEVLSDDQKRAHYDQFGHADPNQGFGGFRSDDFDFGGFSG-FGGFEDIFSTFFGGGRRRDPNAPRA------GADLQYTMTLTFEEAAFGKETDIEIPREETCDTC 151          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_BACST (Chaperone protein dnaJ OS=Bacillus stearothermophilus GN=dnaJ PE=3 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 8.009e-29
Identity = 71/157 (45.22%), Postives = 90/157 (57.32%), Query Frame = 3
Query:  213 ADSDYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNKEPNAEQHLKEISNAYEVLSDDEKRSLNDKFGEA-------GLKGAGMGMGDFSNPFDLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            A  DYY +LGVS+NA+K EIK AYRKL++ YHPDVNKEP+A +  KEI  AYEVLSDD+KR+  D+FG+A       G +     +G FS  F  FE +F                       G D  Y++ + F+EA FG E +IEI   ETC TC
Sbjct:    2 AKRDYYEILGVSKNATKEEIKKAYRKLSKKYHPDVNKEPDAAEKFKEIKEAYEVLSDDQKRAHYDQFGQADPNQGFGGFRSDDFDLGGFSG-FGGFEDIFNTFFGGGRRRNPNAPRA------GADLQYTMTLTFEEAAFGKETDIEIPSEETCNTC 151          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_LISMO (Chaperone protein dnaJ OS=Listeria monocytogenes GN=dnaJ PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.046e-28
Identity = 69/158 (43.67%), Postives = 89/158 (56.33%), Query Frame = 3
Query:  213 ADSDYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNKEPNAEQHLKEISNAYEVLSDDEKRSLNDKFGE--------AGLKGAGMGMGDFSNPFDLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            A  DYY VLG+S++AS  EIK AYRKL++ YHPD+NKE  A++  KEIS AYE LSD +KR+  D++G          G  G G G G FS   D+F++ F G                     G D  Y++ + FKEA+FG + EIEI R E C TC
Sbjct:    2 AKRDYYEVLGISKSASADEIKKAYRKLSKQYHPDINKEAGADEKFKEISEAYEALSDPQKRAQYDQYGHVDPNQGFGGGGAGGGFGGGGFSGFEDIFDTFFGGGGRQQDPNAPR---------QGSDLQYTMRLKFKEAIFGKDAEIEIPREENCDTC 150          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_BACSU (Chaperone protein dnaJ OS=Bacillus subtilis GN=dnaJ PE=2 SV=3)

HSP 1 Score: 126.716 bits (317), Expect = 1.046e-28
Identity = 69/153 (45.10%), Postives = 89/153 (58.17%), Query Frame = 3
Query:  222 DYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNKEPNAEQHLKEISNAYEVLSDDEKRSLNDKFGEA----GLKGAGMGMGDFS--NPFDLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            DYY VLGVS++ASK EIK AYRKL++ YHPD+NKE  +++  KE+  AYE LSDD+KR+  D+FG      G  G G G GDF      D+F S+F G                     G D  Y++ ++F++A FG E  IEI R ETC TC
Sbjct:    5 DYYEVLGVSKSASKDEIKKAYRKLSKKYHPDINKEAGSDEKFKEVKEAYETLSDDQKRAHYDQFGHTDPNQGFGGGGFGGGDFGGFGFDDIFSSIFGGGTRRRDPNAPR---------QGADLQYTMTLSFEDAAFGKETTIEIPREETCETC 148          
The following BLAST results are available for this feature:
BLAST of CN184579 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAJ_LYSSC2.108e-2947.02Chaperone protein dnaJ OS=Lysinibacillus sphaericu... [more]
DNAJ_BACTR2.753e-2945.63Chaperone protein dnaJ OS=Bacillus thermoglucosida... [more]
DNAJ_OCEIH6.133e-2944.08Chaperone protein dnaJ OS=Oceanobacillus iheyensis... [more]
DNAJ_LISW68.009e-2944.59Chaperone protein dnaJ OS=Listeria welshimeri sero... [more]
DNAJ_LISMH8.009e-2943.95Chaperone protein dnaJ OS=Listeria monocytogenes s... [more]
DNAJ_LISIN8.009e-2943.95Chaperone protein dnaJ OS=Listeria innocua GN=dnaJ... [more]
DNAJ_GEOSW8.009e-2945.22Chaperone protein dnaJ OS=Geobacillus sp. (strain ... [more]
DNAJ_BACST8.009e-2945.22Chaperone protein dnaJ OS=Bacillus stearothermophi... [more]
DNAJ_LISMO1.046e-2843.67Chaperone protein dnaJ OS=Listeria monocytogenes G... [more]
DNAJ_BACSU1.046e-2845.10Chaperone protein dnaJ OS=Bacillus subtilis GN=dna... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS04_0005L18_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0005L18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184579 ID=CN184579; Name=CN184579; organism=Citrus sinensis; type=EST; length=664bp
GAGGGTCCACTTTTCACTTCTTTGACCACAATTGCCCTTATGCCAGTTGG
GGAGGGAAAAGAGGCCTGCTGCAAGAAGACATCGCAAGCAGGTTAAGCTG
TCTGGCTGCTCCAAGTTCAAGCTTTTTTTCACGCGATTCCTTCTCTTTGT
TTTCTTATGCTAGTCCATCTCAGACTTCATACCGTCGTAGGGGAGCACGA
TTGATCGTTAGAGCTGATAGTGACTACTATTCAGTTCTAGGGGTGTCAAG
AAATGCAAGTAAATCTGAAATTAAAAGCGCTTATCGGAAGCTTGCAAGGA
GTTATCACCCGGATGTAAACAAAGAACCTAATGCAGAACAGCATCTCAAG
GAAATTAGCAATGCATATGAGGTTCTGTCAGATGATGAGAAACGTTCTTT
AAATGACAAATTTGGGGAGGCTGGACTTAAAGGTGCTGGTATGGGCATGG
GGGATTTCAGCAATCCTTTCGATTTGTTTGAATCACTATTTGAGGGCACG
GGTGGTATGGGCGGAATGGGGAGCATGGGGAGCAGAGCTTCCAGGAGCAG
AGCAGTTGATGGACAAGATGAATATTACAGCCTTGTCATAAATTTCAAAG
AAGCTGTTTTTGGCGTTGAAAAGGAGATTGAGATAACACGTCTTGAGACC
TGTGGCACTTGCCA
back to top