CN184579

Overview
NameCN184579
Unique NameCN184579
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length664
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_NEIMA (Chaperone protein dnaJ OS=Neisseria meningitidis serogroup A GN=dnaJ PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.788e-20
Identity = 59/160 (36.88%), Postives = 79/160 (49.38%), Query Frame = 3
Query:  213 ADSDYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNKE-PNAEQHLKEISNAYEVLSDDEKRSLNDKFGEAGLKGAGM----GMGDFSNP-----FDLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            ++ D+Y+ LGV+R A+  EIK AYRKLA  YHPD N +   AE+  KE+  AYE LSD EKR++ D++G A  +G G     G G F         D+F  +F G                     G+D    + I  +EA  GV+K I I   E C  C
Sbjct:    2 SNQDFYATLGVARTATDDEIKKAYRKLAMKYHPDRNPDNKEAEEKFKEVQKAYETLSDKEKRAMYDQYGHAAFEGGGQGGFGGFGGFGGAQGFDFGDIFSQMFGG-----------GSGRAQPDYQGEDVQVGIEITLEEAAKGVKKRINIPTYEACDVC 150          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_NEIM0 (Chaperone protein dnaJ OS=Neisseria meningitidis serogroup C (strain 053442) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.788e-20
Identity = 59/160 (36.88%), Postives = 79/160 (49.38%), Query Frame = 3
Query:  213 ADSDYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNKE-PNAEQHLKEISNAYEVLSDDEKRSLNDKFGEAGLKGAGM----GMGDFSNP-----FDLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            ++ D+Y+ LGV+R A+  EIK AYRKLA  YHPD N +   AE+  KE+  AYE LSD EKR++ D++G A  +G G     G G F         D+F  +F G                     G+D    + I  +EA  GV+K I I   E C  C
Sbjct:    2 SNQDFYATLGVARTATDDEIKKAYRKLAMKYHPDRNPDNKEAEEKFKEVQKAYETLSDKEKRAMYDQYGHAAFEGGGQGGFGGFGGFGGAQGFDFGDIFSQMFGG-----------GSGRAQPDYQGEDVQVGIEITLEEAAKGVKKRINIPTYEACDVC 150          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_HELHP (Chaperone protein dnaJ OS=Helicobacter hepaticus GN=dnaJ PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.788e-20
Identity = 58/151 (38.41%), Postives = 80/151 (52.98%), Query Frame = 3
Query:  222 DYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNKEP-NAEQHLKEISNAYEVLSDDEKRSLNDKFGEAGLKG---AGMGMGDFSNPFDLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            DYY +L ++R + K  IK AYRK+A  YHPD N +  +AE+  K ++ AYEVLSDD KR + DK+G+ GL+    +G    DFS+ F    S+FE                    +   DE   L ++F EAVFG +KEI  +    C  C
Sbjct:    5 DYYEILEITRTSDKETIKKAYRKMALKYHPDRNPDDKDAEEQFKRVNEAYEVLSDDSKRQIYDKYGKEGLQNSGFSGFSGRDFSDIFGDLGSIFESAFGANFGFSTQKRGGGKYNL---DEIVGLELSFTEAVFGCKKEIHNSFKIACSDC 152          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_BUCAT (Chaperone protein dnaJ OS=Buchnera aphidicola subsp. Acyrthosiphon pisum (strain Tuc7) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.788e-20
Identity = 60/160 (37.50%), Postives = 84/160 (52.50%), Query Frame = 3
Query:  213 ADSDYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNK-EPNAEQHLKEISNAYEVLSDDEKRSLNDKFGEAGLKGAG--------MGMGDFSNPF-DLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            A  DYY +LG+ ++A + EIK AY+KLA  YHPD N+ +  AE   KEI  AYE+L ++EKRS  D++G A  +               DFS+ F D+F  +F G                     G D  Y++ I  +EAV G++KEI+I  L+ C TC
Sbjct:    2 AKKDYYQILGIPKSAEEREIKKAYKKLAMKYHPDRNQGDKTAEGKFKEIKEAYEILINEEKRSAYDQYGHAAFENGQSNSTYSTFTNSADFSDIFGDVFGDIFGGNRTQRAK-------------KGADLCYNMEITLEEAVKGIKKEIQIPTLQKCKTC 148          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_BUCAI (Chaperone protein dnaJ OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=dnaJ PE=3 SV=2)

HSP 1 Score: 99.3673 bits (246), Expect = 1.788e-20
Identity = 60/160 (37.50%), Postives = 84/160 (52.50%), Query Frame = 3
Query:  213 ADSDYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNK-EPNAEQHLKEISNAYEVLSDDEKRSLNDKFGEAGLKGAG--------MGMGDFSNPF-DLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            A  DYY +LG+ ++A + EIK AY+KLA  YHPD N+ +  AE   KEI  AYE+L ++EKRS  D++G A  +               DFS+ F D+F  +F G                     G D  Y++ I  +EAV G++KEI+I  L+ C TC
Sbjct:    2 AKKDYYQILGIPKSAEEREIKKAYKKLAMKYHPDRNQGDKTAEGKFKEIKEAYEILINEEKRSAYDQYGHAAFENGQSNSTYSTFTNSADFSDIFGDVFGDIFGGNRTQRAK-------------KGADLCYNMEITLEEAVKGIKKEIQIPTLQKCKTC 148          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_BUCA5 (Chaperone protein dnaJ OS=Buchnera aphidicola subsp. Acyrthosiphon pisum (strain 5A) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.788e-20
Identity = 60/160 (37.50%), Postives = 84/160 (52.50%), Query Frame = 3
Query:  213 ADSDYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNK-EPNAEQHLKEISNAYEVLSDDEKRSLNDKFGEAGLKGAG--------MGMGDFSNPF-DLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            A  DYY +LG+ ++A + EIK AY+KLA  YHPD N+ +  AE   KEI  AYE+L ++EKRS  D++G A  +               DFS+ F D+F  +F G                     G D  Y++ I  +EAV G++KEI+I  L+ C TC
Sbjct:    2 AKKDYYQILGIPKSAEEREIKKAYKKLAMKYHPDRNQGDKTAEGKFKEIKEAYEILINEEKRSAYDQYGHAAFENGQSNSTYSTFTNSADFSDIFGDVFGDIFGGNRTQRAK-------------KGADLCYNMEITLEEAVKGIKKEIQIPTLQKCKTC 148          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_BORGA (Chaperone protein dnaJ OS=Borrelia garinii GN=dnaJ PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.788e-20
Identity = 60/157 (38.22%), Postives = 81/157 (51.59%), Query Frame = 3
Query:  222 DYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNK-EPNAEQHLKEISNAYEVLSDDEKRSLNDKFGEAGLKGAGM-----GMGDFSNPF----DLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            DYY +LG+S+ ASK EIK AYRK+A  YHPD N+    A    KE + AYEVL DD K++  D+FG +  +G G      G   FS+ F    D+F+S F G                     G+D  Y++ I+ + A FG +  I ITR   C +C
Sbjct:    4 DYYEILGLSKGASKDEIKKAYRKIAIKYHPDRNQGNEEAASIFKEATQAYEVLIDDNKKAKYDRFGHSAFEGGGFEGFSGGFSGFSDIFEDFGDIFDSFFTGN---------KGQERNRKHARGEDLGYNIEISLENAYFGYKNNINITRQILCHSC 151          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_SHESR (Chaperone protein dnaJ OS=Shewanella sp. (strain MR-7) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 2.336e-20
Identity = 61/155 (39.35%), Postives = 85/155 (54.84%), Query Frame = 3
Query:  222 DYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNK-EPNAEQHLKEISNAYEVLSDDEKRSLNDKFGEAGL---KGAG---MGMGDFSNPF-DLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            DYY VLGV R+AS+ EIK AY++LA  +HPD N  +  AE   KE+  AYE+L+D  K++  D+FG AG+   +G G    G GDF + F D+F  +F G                     G D  Y+L ++ +EAV G+ KE+ I  L +C  C
Sbjct:    5 DYYEVLGVGRDASEREIKKAYKRLAMKFHPDRNPGDKAAEASFKEVKEAYEILTDANKKAAYDQFGHAGVDPNRGGGGGYGGAGDFGDIFGDVFGDIFGG----------GRRGGQRQAARGSDLRYNLELSLEEAVKGLTKELRIPTLASCDVC 149          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_SHESM (Chaperone protein dnaJ OS=Shewanella sp. (strain MR-4) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 2.336e-20
Identity = 61/155 (39.35%), Postives = 85/155 (54.84%), Query Frame = 3
Query:  222 DYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNK-EPNAEQHLKEISNAYEVLSDDEKRSLNDKFGEAGL---KGAG---MGMGDFSNPF-DLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            DYY VLGV R+AS+ EIK AY++LA  +HPD N  +  AE   KE+  AYE+L+D  K++  D+FG AG+   +G G    G GDF + F D+F  +F G                     G D  Y+L ++ +EAV G+ KE+ I  L +C  C
Sbjct:    5 DYYEVLGVGRDASEREIKKAYKRLAMKFHPDRNPGDKAAEASFKEVKEAYEILTDANKKAAYDQFGHAGVDPNRGGGGGYGGAGDFGDIFGDVFGDIFGG----------GRRGGQRQAARGSDLRYNLELSLEEAVKGLTKELRIPTLASCDVC 149          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_SHESA (Chaperone protein dnaJ OS=Shewanella sp. (strain ANA-3) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 2.336e-20
Identity = 61/155 (39.35%), Postives = 85/155 (54.84%), Query Frame = 3
Query:  222 DYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNK-EPNAEQHLKEISNAYEVLSDDEKRSLNDKFGEAGL---KGAG---MGMGDFSNPF-DLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            DYY VLGV R+AS+ EIK AY++LA  +HPD N  +  AE   KE+  AYE+L+D  K++  D+FG AG+   +G G    G GDF + F D+F  +F G                     G D  Y+L ++ +EAV G+ KE+ I  L +C  C
Sbjct:    5 DYYEVLGVGRDASEREIKKAYKRLAMKFHPDRNPGDKAAEASFKEVKEAYEILTDANKKAAYDQFGHAGVDPNRGGGGGYGGAGDFGDIFGDVFGDIFGG----------GRRGGQRQAARGSDLRYNLELSLEEAVKGLTKELRIPTLASCDVC 149          
The following BLAST results are available for this feature:
BLAST of CN184579 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAJ_NEIMA1.788e-2036.88Chaperone protein dnaJ OS=Neisseria meningitidis s... [more]
DNAJ_NEIM01.788e-2036.88Chaperone protein dnaJ OS=Neisseria meningitidis s... [more]
DNAJ_HELHP1.788e-2038.41Chaperone protein dnaJ OS=Helicobacter hepaticus G... [more]
DNAJ_BUCAT1.788e-2037.50Chaperone protein dnaJ OS=Buchnera aphidicola subs... [more]
DNAJ_BUCAI1.788e-2037.50Chaperone protein dnaJ OS=Buchnera aphidicola subs... [more]
DNAJ_BUCA51.788e-2037.50Chaperone protein dnaJ OS=Buchnera aphidicola subs... [more]
DNAJ_BORGA1.788e-2038.22Chaperone protein dnaJ OS=Borrelia garinii GN=dnaJ... [more]
DNAJ_SHESR2.336e-2039.35Chaperone protein dnaJ OS=Shewanella sp. (strain M... [more]
DNAJ_SHESM2.336e-2039.35Chaperone protein dnaJ OS=Shewanella sp. (strain M... [more]
DNAJ_SHESA2.336e-2039.35Chaperone protein dnaJ OS=Shewanella sp. (strain A... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0005L18_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0005L18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184579 ID=CN184579; Name=CN184579; organism=Citrus sinensis; type=EST; length=664bp
GAGGGTCCACTTTTCACTTCTTTGACCACAATTGCCCTTATGCCAGTTGG
GGAGGGAAAAGAGGCCTGCTGCAAGAAGACATCGCAAGCAGGTTAAGCTG
TCTGGCTGCTCCAAGTTCAAGCTTTTTTTCACGCGATTCCTTCTCTTTGT
TTTCTTATGCTAGTCCATCTCAGACTTCATACCGTCGTAGGGGAGCACGA
TTGATCGTTAGAGCTGATAGTGACTACTATTCAGTTCTAGGGGTGTCAAG
AAATGCAAGTAAATCTGAAATTAAAAGCGCTTATCGGAAGCTTGCAAGGA
GTTATCACCCGGATGTAAACAAAGAACCTAATGCAGAACAGCATCTCAAG
GAAATTAGCAATGCATATGAGGTTCTGTCAGATGATGAGAAACGTTCTTT
AAATGACAAATTTGGGGAGGCTGGACTTAAAGGTGCTGGTATGGGCATGG
GGGATTTCAGCAATCCTTTCGATTTGTTTGAATCACTATTTGAGGGCACG
GGTGGTATGGGCGGAATGGGGAGCATGGGGAGCAGAGCTTCCAGGAGCAG
AGCAGTTGATGGACAAGATGAATATTACAGCCTTGTCATAAATTTCAAAG
AAGCTGTTTTTGGCGTTGAAAAGGAGATTGAGATAACACGTCTTGAGACC
TGTGGCACTTGCCA
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