CN184579

Overview
NameCN184579
Unique NameCN184579
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length664
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_NITOC (Chaperone protein dnaJ OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 3.051e-20
Identity = 63/154 (40.91%), Postives = 79/154 (51.30%), Query Frame = 3
Query:  213 ADSDYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNKEPN-AEQHLKEISNAYEVLSDDEKRSLNDKFGEAGLKGAGMGMGDFSNPFD---LFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            A  DYY  LGV+RNAS +EIK AYR+LA  YHPD N +   AE+H KEI  AY+VLSD  KR+  D+FG AG+ GAG   G   + F+    F  +F G                     G D  Y+L +  +EAV G   +I I     C  C
Sbjct:    2 AKRDYYEALGVARNASDAEIKKAYRRLAMRYHPDRNPDDKAAEEHFKEIQEAYDVLSDARKRTAYDQFGHAGV-GAGASAGPGGHGFEGGSNFGDIF-GDVFNDIFGAAAGRGGRRQAYRGADLRYNLDLTLEEAVAGTTAKIRIPTYVACKAC 153          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_NEIG1 (Chaperone protein dnaJ OS=Neisseria gonorrhoeae (strain ATCC 700825 / FA 1090) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 3.051e-20
Identity = 59/160 (36.88%), Postives = 79/160 (49.38%), Query Frame = 3
Query:  213 ADSDYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNKE-PNAEQHLKEISNAYEVLSDDEKRSLNDKFGEAGLKGAGM----GMGDFSNP-----FDLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            ++ D+Y+ LGV+R A+  EIK AYRKLA  YHPD N +   AE+  KE+  AYE LSD EKR++ D++G A  +G G     G G F         D+F  +F G                     G+D    + I  +EA  GV+K I I   E C  C
Sbjct:    2 SNQDFYATLGVARAATDDEIKKAYRKLAMKYHPDRNPDNKEAEEKFKEVQKAYETLSDKEKRAMYDQYGHAAFEGGGQGGFGGFGGFGGAQGFDFGDIFSQMFGG-----------GSGRAQPDYQGEDVQVGIEITLEEAAKGVKKRINIPTYEACDVC 150          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_BURPP (Chaperone protein dnaJ OS=Burkholderia phytofirmans (strain DSM 17436 / PsJN) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 3.051e-20
Identity = 61/157 (38.85%), Postives = 83/157 (52.87%), Query Frame = 3
Query:  213 ADSDYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNK-EPNAEQHLKEISNAYEVLSDDEKRSLNDKFGEAG----LKGAG-MGMGDFSNPF-DLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            A  DYY VLGV++NAS  EIK AYRKLA  +HPD N    +AE H KE+  AYE+LSD +KR+  D++G AG    + GAG  G G F++ F D+F  +F                       G D  YS+ I  ++A  G + +I +    +C  C
Sbjct:    2 AKRDYYEVLGVAKNASDDEIKKAYRKLAMKHHPDRNPGNKDAEGHFKEVKEAYEMLSDSQKRAAYDQYGHAGVDPNMGGAGAQGFGGFADAFGDIFGDIF---GQAAGGAARGGGRAGPQVYRGADLRYSMEITLEQAAHGYDTQIRVPSWVSCEIC 155          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_WOLSU (Chaperone protein dnaJ OS=Wolinella succinogenes GN=dnaJ PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 3.984e-20
Identity = 59/152 (38.82%), Postives = 83/152 (54.61%), Query Frame = 3
Query:  222 DYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNK-EPNAEQHLKEISNAYEVLSDDEKRSLNDKFGEAGLKGAG----MGMGDFSNPFDLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            DYY +L + R+AS  EIK AYRK+A  YHPD N+    AE+  K ++ AY+VLSD+ KR L D++G+ GL+  G     G G F + FD   S+F+                    +D   E   L ++FKEA+FG +KEI+I   + C  C
Sbjct:    5 DYYEILEIERSASGEEIKKAYRKMAMKYHPDRNEGSSEAEEMFKRVNEAYQVLSDEGKRQLYDRYGKQGLESQGYSGFSGRG-FEDVFDDLGSIFDSVFGGGFSSSSRKRSGPKYNLDLAME---LDLSFKEAIFGCKKEIKIRYKDACPDC 152          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_VIBVY (Chaperone protein dnaJ OS=Vibrio vulnificus (strain YJ016) GN=dnaJ PE=3 SV=2)

HSP 1 Score: 98.2117 bits (243), Expect = 3.984e-20
Identity = 58/157 (36.94%), Postives = 86/157 (54.78%), Query Frame = 3
Query:  222 DYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNK-EPNAEQHLKEISNAYEVLSDDEKRSLNDKFGEAGLKGAGMGMG--------DFSNPF-DLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            D+Y VLGVSR+AS+ +IK AY++LA  +HPD N+ + +A    KE+  AYE+L+D +K++  D++G A  +  G G G        DF + F D+F  +F G                     G D  Y++ ++ +EAV GV KEIE+  L  C TC
Sbjct:    5 DFYEVLGVSRDASERDIKKAYKRLAMKFHPDRNQGDESAADKFKEVKEAYEILTDPQKKAAYDQYGHAAFEQGGGGFGGGFGGGGADFGDIFGDVFGDIFGGGRRGGGHARPQR---------GADLRYNMELSLEEAVRGVSKEIEVPTLVHCDTC 152          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_VIBVU (Chaperone protein dnaJ OS=Vibrio vulnificus GN=dnaJ PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 3.984e-20
Identity = 58/157 (36.94%), Postives = 86/157 (54.78%), Query Frame = 3
Query:  222 DYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNK-EPNAEQHLKEISNAYEVLSDDEKRSLNDKFGEAGLKGAGMGMG--------DFSNPF-DLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            D+Y VLGVSR+AS+ +IK AY++LA  +HPD N+ + +A    KE+  AYE+L+D +K++  D++G A  +  G G G        DF + F D+F  +F G                     G D  Y++ ++ +EAV GV KEIE+  L  C TC
Sbjct:    5 DFYEVLGVSRDASERDIKKAYKRLAMKFHPDRNQGDESAADKFKEVKEAYEILTDPQKKAAYDQYGHAAFEQGGGGFGGGFGGGGADFGDIFGDVFGDIFGGGRRGGGHARPQR---------GADLRYNMELSLEEAVRGVSKEIEVPTLVHCDTC 152          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_VIBSL (Chaperone protein dnaJ OS=Vibrio splendidus (strain LGP32) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 3.984e-20
Identity = 58/157 (36.94%), Postives = 86/157 (54.78%), Query Frame = 3
Query:  222 DYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNK-EPNAEQHLKEISNAYEVLSDDEKRSLNDKFGEAGLKGAGM--------GMGDFSNPF-DLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            D+Y VLGVSR+AS+ +IK AY++LA  +HPD N+ + +A    KE+  AYE+L+D +K++  D++G A  +  GM        G GDF + F D+F  +F G                     G D  Y++ ++ +EAV GV KEIE+  L  C  C
Sbjct:    5 DFYEVLGVSRDASERDIKKAYKRLAMKFHPDRNQGDDSAADKFKEVKVAYEILTDAQKKAAYDQYGHAAFEQGGMGGGGYGGGGQGDFGDIFGDVFGDIFGGGRRGGGQARAQR---------GSDLRYNMELSLEEAVRGVSKEIEVPTLVECDIC 152          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_VIBHA (Chaperone protein dnaJ OS=Vibrio harveyi GN=dnaJ PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 3.984e-20
Identity = 58/158 (36.71%), Postives = 86/158 (54.43%), Query Frame = 3
Query:  222 DYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNK-EPNAEQHLKEISNAYEVLSDDEKRSLNDKFGEAGLKGAGMGMG---------DFSNPF-DLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            D+Y VLGVSR+AS+ +IK AY++LA  YHPD N+ + +A    KE+  +YE+L+D +K++  D++G A  +  G G G         DF + F D+F  +F G                     G D  Y++ ++ +EAV GV KEIE+  L  C TC
Sbjct:    5 DFYEVLGVSRDASERDIKKAYKRLAMKYHPDRNQGDESAADKFKEVKESYEILTDPQKKAAYDQYGHAAFEQGGGGFGGGGFGGGGADFGDIFGDVFGDIFGGGRRGGGQQRAQR---------GADLRYNMELSLEEAVRGVSKEIEVPTLVHCDTC 153          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_SHEHH (Chaperone protein dnaJ OS=Shewanella halifaxensis (strain HAW-EB4) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 3.984e-20
Identity = 60/154 (38.96%), Postives = 83/154 (53.90%), Query Frame = 3
Query:  222 DYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNK-EPNAEQHLKEISNAYEVLSDDEKRSLNDKFGEAGLK----GAGMGMG-DFSNPF-DLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            D+Y VLGV R+AS+ EIK AY++LA  +HPD N     AE   KE+  AYE+L+D +K++  D+FG AG+     G G G G DF + F D+F  +F G                     G D  Y+L ++ +EAV G+ KE+ I  L  C  C
Sbjct:    5 DFYEVLGVGRDASEREIKKAYKRLAMKFHPDRNPGNKEAEASFKEVKEAYEILTDGDKKAAYDQFGHAGVDPNRGGGGFGGGADFGDVFGDVFGDIFGG----------GRRGGQRQAARGSDLRYNLELSLEEAVRGLTKELRIPTLAACDAC 148          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_PSEPW (Chaperone protein dnaJ OS=Pseudomonas putida (strain W619) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 3.984e-20
Identity = 61/155 (39.35%), Postives = 80/155 (51.61%), Query Frame = 3
Query:  222 DYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNK-EPNAEQHLKEISNAYEVLSDDEKRSLNDKFGEAGLK------GAGMGMGDFSNPF-DLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            DYY VLGV R AS++++K AYR+LA  YHPD N  +  +E   KE + AYEVLSD  KR+  D++G AG+       GAG G  +FS+ F D+F   F G                     G D  Y+L +N +EAV G    I +  L  C  C
Sbjct:    5 DYYEVLGVERGASEADLKKAYRRLAMKYHPDRNPGDKESEDKFKEANEAYEVLSDASKRAAFDQYGHAGVDPSMGGGGAGFGGANFSDIFGDVFSDFFGG----------GRGGGRGGAARGSDLRYTLELNLEEAVRGTTVSIRVPTLVNCQPC 149          
The following BLAST results are available for this feature:
BLAST of CN184579 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAJ_NITOC3.051e-2040.91Chaperone protein dnaJ OS=Nitrosococcus oceani (st... [more]
DNAJ_NEIG13.051e-2036.88Chaperone protein dnaJ OS=Neisseria gonorrhoeae (s... [more]
DNAJ_BURPP3.051e-2038.85Chaperone protein dnaJ OS=Burkholderia phytofirman... [more]
DNAJ_WOLSU3.984e-2038.82Chaperone protein dnaJ OS=Wolinella succinogenes G... [more]
DNAJ_VIBVY3.984e-2036.94Chaperone protein dnaJ OS=Vibrio vulnificus (strai... [more]
DNAJ_VIBVU3.984e-2036.94Chaperone protein dnaJ OS=Vibrio vulnificus GN=dna... [more]
DNAJ_VIBSL3.984e-2036.94Chaperone protein dnaJ OS=Vibrio splendidus (strai... [more]
DNAJ_VIBHA3.984e-2036.71Chaperone protein dnaJ OS=Vibrio harveyi GN=dnaJ P... [more]
DNAJ_SHEHH3.984e-2038.96Chaperone protein dnaJ OS=Shewanella halifaxensis ... [more]
DNAJ_PSEPW3.984e-2039.35Chaperone protein dnaJ OS=Pseudomonas putida (stra... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0005L18_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0005L18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184579 ID=CN184579; Name=CN184579; organism=Citrus sinensis; type=EST; length=664bp
GAGGGTCCACTTTTCACTTCTTTGACCACAATTGCCCTTATGCCAGTTGG
GGAGGGAAAAGAGGCCTGCTGCAAGAAGACATCGCAAGCAGGTTAAGCTG
TCTGGCTGCTCCAAGTTCAAGCTTTTTTTCACGCGATTCCTTCTCTTTGT
TTTCTTATGCTAGTCCATCTCAGACTTCATACCGTCGTAGGGGAGCACGA
TTGATCGTTAGAGCTGATAGTGACTACTATTCAGTTCTAGGGGTGTCAAG
AAATGCAAGTAAATCTGAAATTAAAAGCGCTTATCGGAAGCTTGCAAGGA
GTTATCACCCGGATGTAAACAAAGAACCTAATGCAGAACAGCATCTCAAG
GAAATTAGCAATGCATATGAGGTTCTGTCAGATGATGAGAAACGTTCTTT
AAATGACAAATTTGGGGAGGCTGGACTTAAAGGTGCTGGTATGGGCATGG
GGGATTTCAGCAATCCTTTCGATTTGTTTGAATCACTATTTGAGGGCACG
GGTGGTATGGGCGGAATGGGGAGCATGGGGAGCAGAGCTTCCAGGAGCAG
AGCAGTTGATGGACAAGATGAATATTACAGCCTTGTCATAAATTTCAAAG
AAGCTGTTTTTGGCGTTGAAAAGGAGATTGAGATAACACGTCTTGAGACC
TGTGGCACTTGCCA
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