CN184579

Overview
NameCN184579
Unique NameCN184579
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length664
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3990 contig Csv1_Contig3990:181..844. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_BACLD (Chaperone protein dnaJ OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.366e-28
Identity = 70/153 (45.75%), Postives = 87/153 (56.86%), Query Frame = 3
Query:  222 DYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNKEPNAEQHLKEISNAYEVLSDDEKRSLNDKFGEA----GLKGAGMGMGDFS--NPFDLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            DYY VLGV ++ASK EIK AYRKL++ YHPD+NKE  A +  KE+  AYE LSDD+KR+  D+FG      G  G G G GDF      D+F S+F G                     G D  Y++ ++F+EA FG E  IEI R ETC TC
Sbjct:    5 DYYEVLGVGKSASKDEIKKAYRKLSKKYHPDINKEAGAAEKFKEVKEAYETLSDDQKRAHYDQFGHTDPNQGFGGGGFGGGDFGGFGFDDIFSSIFGGGARRRDPNAPR---------QGADLQYTMTLSFEEAAFGKETTIEIPREETCETC 148          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_METTE (Chaperone protein dnaJ OS=Methanosarcina thermophila GN=dnaJ PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 1.784e-28
Identity = 69/152 (45.39%), Postives = 85/152 (55.92%), Query Frame = 3
Query:  222 DYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNKEPNAEQHLKEISNAYEVLSDDEKRSLNDKFGEAGLKGAGMGM-----GDFSNPFDLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            DYY +LG+SR+A+  +IK +YRKLA  YHPD NKEP AE+  KEIS AY VLSD EKR+  D+FG AG+ G           DFS   D+FE  F G+                    G D  Y L I F+EA FGV K+I++ R E C  C
Sbjct:    6 DYYEILGLSRDATPEDIKKSYRKLALKYHPDRNKEPGAEEKFKEISEAYAVLSDPEKRAQYDRFGHAGINGQYTAEDIFRGADFSGFGDIFEMFFGGSRRGPRGPRR-----------GSDLQYDLYITFEEAAFGVRKDIDVPRTERCSNC 146          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_BACHD (Chaperone protein dnaJ OS=Bacillus halodurans GN=dnaJ PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 1.784e-28
Identity = 69/149 (46.31%), Postives = 84/149 (56.38%), Query Frame = 3
Query:  222 DYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNKEPNAEQHLKEISNAYEVLSDDEKRSLNDKFG--EAGLKGAGMGMGDFSNPFDLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            DYY VLGV RNAS  E+K AYRKLAR YHPDVNK P+AE   KE+  A++ LSD +K++  D+FG  +      G G GDF    D+F+  F G                     G D  Y++ + FKEAVFG E  IEI R ETC TC
Sbjct:    5 DYYEVLGVDRNASADEVKKAYRKLARKYHPDVNKAPDAEDKFKEVKEAFDTLSDPQKKAHYDQFGHTDPNQGFGGGGAGDFGGFSDIFDMFFGGGGGRRNPNAPR---------QGADLQYTMTLEFKEAVFGKETTIEIPREETCHTC 144          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_BACCN (Chaperone protein dnaJ OS=Bacillus cereus subsp. cytotoxis (strain NVH 391-98) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 1.784e-28
Identity = 69/150 (46.00%), Postives = 87/150 (58.00%), Query Frame = 3
Query:  222 DYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNKEPNAEQHLKEISNAYEVLSDDEKRSLNDKFGEAGLKGAGMGMGDFSNPF---DLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            DYY VLGVS++ASK EIK AYR+LA+ YHPDV+KE NA +  KE+  AYEVLSD++KR+  D+FG AG    G G GDF   F   D+F S F G                     G D  Y + + F+EA+FG E  +EI   + C TC
Sbjct:    5 DYYEVLGVSKSASKDEIKKAYRRLAKKYHPDVSKEENAVEKFKEVQEAYEVLSDEQKRAQYDQFGHAG-SSQGFGGGDFGGGFGFEDIFSSFFGGGSRRRDPNAPR---------QGADLQYQVTLEFEEAIFGKELNVEIPVEDPCDTC 144          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_STACT (Chaperone protein dnaJ OS=Staphylococcus carnosus (strain TM300) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 2.330e-28
Identity = 71/159 (44.65%), Postives = 88/159 (55.35%), Query Frame = 3
Query:  213 ADSDYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNKEPNAEQHLKEISNAYEVLSDDEKRSLNDKFGEAGLK--------GAGMGMGDFSNPF-DLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            A  DYY VLGVS++ASK EIK AYRKL++ YHPD+N+E  AE+  KEIS AYEVLSD+ KR+  D+FG  G +        G G   G F   F D+F S F G                     G D  Y++ + F+EA FG EKEI I +   C TC
Sbjct:    2 AKRDYYEVLGVSKDASKDEIKKAYRKLSKKYHPDINQEEGAEEKFKEISEAYEVLSDENKRANYDQFGHDGPQGGFGGQGFGGGQDFGGFGGGFEDIFSSFFGGGAQRDPNVPR----------KGDDLQYTMTVTFEEAAFGTEKEISIRKQVKCETC 150          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_BACP2 (Chaperone protein dnaJ OS=Bacillus pumilus (strain SAFR-032) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 2.330e-28
Identity = 69/155 (44.52%), Postives = 88/155 (56.77%), Query Frame = 3
Query:  222 DYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNKEPNAEQHLKEISNAYEVLSDDEKRSLNDKFGEA----GLKGAGMG----MGDFSNPFDLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            DYY VLGVS++ASK EIK AYRKL++ YHPD+NKE  +++  KE+  AYE LSDD+KRS  D+FG      G  G G G     G F    D+F S+F G                     G D  Y++ ++F+EA FG E  IEI R E+C TC
Sbjct:    5 DYYEVLGVSKSASKDEIKKAYRKLSKKYHPDINKEAGSDEKFKEVKEAYETLSDDQKRSQYDQFGHTDPNQGFGGGGFGGGGDFGGFGGFDDIFSSIFGGGARRRDPNAPR---------QGADLQYTMTLSFEEAAFGKEATIEIPREESCETC 150          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_STAS1 (Chaperone protein dnaJ OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 3.044e-28
Identity = 73/159 (45.91%), Postives = 89/159 (55.97%), Query Frame = 3
Query:  213 ADSDYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNKEPNAEQHLKEISNAYEVLSDDEKRSLNDKFG----EAGLKGAGMGMGDFS-----NPFDLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            A  DYY VLGVS++ASK EIK AYRKL++ YHPD+NKE  A++  KEIS AYEVLSD+ KR+  D+FG    + G  G G G  DFS        D+F S F G                     G D  Y++ + F EAVFG EKEI I +   C TC
Sbjct:    2 AKRDYYEVLGVSKSASKDEIKKAYRKLSKQYHPDINKEEGADEKFKEISEAYEVLSDENKRANYDQFGHDGPQGGFGGQGFGGQDFSGFGGGGFEDIFSSFFGGGRQQRDPNAPR---------KGDDLQYTMTVTFDEAVFGSEKEISIRKDVACHTC 151          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_STAAW (Chaperone protein dnaJ OS=Staphylococcus aureus (strain MW2) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 3.044e-28
Identity = 72/164 (43.90%), Postives = 90/164 (54.88%), Query Frame = 3
Query:  213 ADSDYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNKEPNAEQHLKEISNAYEVLSDDEKRSLNDKFGEAGLKG--------------AGMGMGDFSNPFDLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            A  DYY VLG+S++ASK EIK AYRKL++ YHPD+NKE  A++  KEIS AYEVLSDD KR+  D+FG  G +G              +G G G F    D+F S F G                     G D  Y++ + F+EAVFG  KEI I +  TC TC
Sbjct:    2 AKRDYYEVLGISKDASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDNKRASYDQFGHDGPQGFGGQGFNGSDFGGFSGFGGGGFE---DIFSSFFGG----------GRQRDPNAPQKGDDLQYTMTLTFEEAVFGTTKEISIRKDVTCETC 152          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_STAAU (Chaperone protein dnaJ OS=Staphylococcus aureus GN=dnaJ PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 3.044e-28
Identity = 72/164 (43.90%), Postives = 90/164 (54.88%), Query Frame = 3
Query:  213 ADSDYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNKEPNAEQHLKEISNAYEVLSDDEKRSLNDKFGEAGLKG--------------AGMGMGDFSNPFDLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            A  DYY VLG+S++ASK EIK AYRKL++ YHPD+NKE  A++  KEIS AYEVLSDD KR+  D+FG  G +G              +G G G F    D+F S F G                     G D  Y++ + F+EAVFG  KEI I +  TC TC
Sbjct:    2 AKRDYYEVLGISKDASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDNKRATIDQFGHDGPQGFGGQGFNGSDFGGFSGFGGGGFE---DIFSSFFGG----------GSQRDPNAPQKGDDLQYTMTLTFEEAVFGTTKEISIRKDVTCETC 152          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_STAAT (Chaperone protein dnaJ OS=Staphylococcus aureus (strain USA300 / TCH1516) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 3.044e-28
Identity = 72/164 (43.90%), Postives = 90/164 (54.88%), Query Frame = 3
Query:  213 ADSDYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNKEPNAEQHLKEISNAYEVLSDDEKRSLNDKFGEAGLKG--------------AGMGMGDFSNPFDLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            A  DYY VLG+S++ASK EIK AYRKL++ YHPD+NKE  A++  KEIS AYEVLSDD KR+  D+FG  G +G              +G G G F    D+F S F G                     G D  Y++ + F+EAVFG  KEI I +  TC TC
Sbjct:    2 AKRDYYEVLGISKDASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDNKRASYDQFGHDGPQGFGGQGFNGSDFGGFSGFGGGGFE---DIFSSFFGG----------GRQRDPNAPQKGDDLQYTMTLTFEEAVFGTTKEISIRKDVTCETC 152          
The following BLAST results are available for this feature:
BLAST of CN184579 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAJ_BACLD1.366e-2845.75Chaperone protein dnaJ OS=Bacillus licheniformis (... [more]
DNAJ_METTE1.784e-2845.39Chaperone protein dnaJ OS=Methanosarcina thermophi... [more]
DNAJ_BACHD1.784e-2846.31Chaperone protein dnaJ OS=Bacillus halodurans GN=d... [more]
DNAJ_BACCN1.784e-2846.00Chaperone protein dnaJ OS=Bacillus cereus subsp. c... [more]
DNAJ_STACT2.330e-2844.65Chaperone protein dnaJ OS=Staphylococcus carnosus ... [more]
DNAJ_BACP22.330e-2844.52Chaperone protein dnaJ OS=Bacillus pumilus (strain... [more]
DNAJ_STAS13.044e-2845.91Chaperone protein dnaJ OS=Staphylococcus saprophyt... [more]
DNAJ_STAAW3.044e-2843.90Chaperone protein dnaJ OS=Staphylococcus aureus (s... [more]
DNAJ_STAAU3.044e-2843.90Chaperone protein dnaJ OS=Staphylococcus aureus GN... [more]
DNAJ_STAAT3.044e-2843.90Chaperone protein dnaJ OS=Staphylococcus aureus (s... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0005L18_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0005L18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184579 ID=CN184579; Name=CN184579; organism=Citrus sinensis; type=EST; length=664bp
GAGGGTCCACTTTTCACTTCTTTGACCACAATTGCCCTTATGCCAGTTGG
GGAGGGAAAAGAGGCCTGCTGCAAGAAGACATCGCAAGCAGGTTAAGCTG
TCTGGCTGCTCCAAGTTCAAGCTTTTTTTCACGCGATTCCTTCTCTTTGT
TTTCTTATGCTAGTCCATCTCAGACTTCATACCGTCGTAGGGGAGCACGA
TTGATCGTTAGAGCTGATAGTGACTACTATTCAGTTCTAGGGGTGTCAAG
AAATGCAAGTAAATCTGAAATTAAAAGCGCTTATCGGAAGCTTGCAAGGA
GTTATCACCCGGATGTAAACAAAGAACCTAATGCAGAACAGCATCTCAAG
GAAATTAGCAATGCATATGAGGTTCTGTCAGATGATGAGAAACGTTCTTT
AAATGACAAATTTGGGGAGGCTGGACTTAAAGGTGCTGGTATGGGCATGG
GGGATTTCAGCAATCCTTTCGATTTGTTTGAATCACTATTTGAGGGCACG
GGTGGTATGGGCGGAATGGGGAGCATGGGGAGCAGAGCTTCCAGGAGCAG
AGCAGTTGATGGACAAGATGAATATTACAGCCTTGTCATAAATTTCAAAG
AAGCTGTTTTTGGCGTTGAAAAGGAGATTGAGATAACACGTCTTGAGACC
TGTGGCACTTGCCA
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