CN184579

Overview
NameCN184579
Unique NameCN184579
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length664
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_PARDP (Chaperone protein dnaJ OS=Paracoccus denitrificans (strain Pd 1222) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 3.984e-20
Identity = 61/158 (38.61%), Postives = 80/158 (50.63%), Query Frame = 3
Query:  213 ADSDYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNKEPN-AEQHLKEISNAYEVLSDDEKRSLNDKFGEAGLK------GAGMGMGDFSNPF-DLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            A  DYY VLGV+R AS  EIK AYR  A+  HPD NK+   +E   KE++ AYE L DD+K++  D+FG A  +      G G G GDF + F D+FE LF                       GQD  Y+L ++ +EA  G +K I +     C  C
Sbjct:    2 AKRDYYEVLGVARGASADEIKKAYRAKAKQLHPDRNKDCKVSEAAFKEVNEAYECLKDDQKKAAYDRFGHAAFENGGGGFGRGNGHGDFGSAFADVFEDLFGDMMGRRAGGGGRSRASR-----GQDLRYNLRVSLEEAYNGAQKTINVPGSVACAAC 154          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_DIAST (Chaperone protein dnaJ OS=Diaphorobacter sp. (strain TPSY) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 3.984e-20
Identity = 60/158 (37.97%), Postives = 80/158 (50.63%), Query Frame = 3
Query:  222 DYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNK---EPNAEQHLKEISNAYEVLSDDEKRSLNDKFGEAGL-------KGAGMGMGDFSNPF-DLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            D+Y VLGV +NAS  E+K AYRKLA  YHPD N+      AE+  KE   AYE+LSD +KR+  D++G AG+        G   G G F+  F D+F  +F G                     G D  Y++ +  +EA  G E +I I   E+C TC
Sbjct:    5 DFYEVLGVPKNASDDELKKAYRKLAMKYHPDRNQGDAAKPAEEKFKEAKEAYEILSDAQKRAAYDQYGHAGVDPNMRGGMGGAEGFGGFAEAFGDIFGDMFGGARGRGGRQVYR----------GNDLSYAMDVTLEEAAKGKEAQIRIPSWESCETC 152          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_CHLCH (Chaperone protein dnaJ OS=Chlorobium chlorochromatii (strain CaD3) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 3.984e-20
Identity = 61/169 (36.09%), Postives = 81/169 (47.93%), Query Frame = 3
Query:  222 DYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNK-EPNAEQHLKEISNAYEVLSDDEKRSLNDKFGEAGL--------KGAGMGMGDFSNPFDLFESLFEG-------------TXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            DYY  LGV+R+++K +IK AYRKLA  YHPD N     AE+H KE++ AYEVLS+D+KR   D+FG AG+         GA  G  DFS+ F  F  +F G                                + G D    L +  +E   GVEK +++ R   C  C
Sbjct:    4 DYYETLGVTRSSNKDDIKKAYRKLAVQYHPDKNPGNKEAEEHFKEVNEAYEVLSNDDKRRRYDQFGHAGVGSSAASGGGGAYAGGADFSDIFSAFNDMFTGGGARRGGSPFGGFEDAFGGGGGGGARRRASSGIHGTDLKIRLKLTLEEIAKGVEKTLKVKRQVPCEVC 172          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_CHLAB (Chaperone protein dnaJ OS=Chlamydophila abortus GN=dnaJ PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 3.984e-20
Identity = 63/164 (38.41%), Postives = 81/164 (49.39%), Query Frame = 3
Query:  222 DYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNK-EPNAEQHLKEISNAYEVLSDDEKRSLNDKFGE-------AGLKGAGMG---------MGDFSNPFDLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            DYY VLGVS+ AS  EIK +YRKLA  YHPD N  +  AE+  KE+S AYEVLSD +KR   D++G+        G  GAGM          MG F        S FEG                     G  +   + + F+EA  GV+KE+ ++  +TC TC
Sbjct:    2 DYYDVLGVSKTASPEEIKKSYRKLAVKYHPDKNPGDAEAEKRFKEVSEAYEVLSDPQKRESYDRYGKDGPFAGAGGFGGAGMSNMEDALRTFMGAFGGELGGSGSFFEGLFGGLGEAFGMRGDPAGAR-QGASKKVHITLTFEEAARGVKKELLVSGYKTCETC 164          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_AZOVD (Chaperone protein dnaJ OS=Azotobacter vinelandii (strain DJ / ATCC BAA-1303) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 3.984e-20
Identity = 64/159 (40.25%), Postives = 83/159 (52.20%), Query Frame = 3
Query:  213 ADSDYYSVLGVSRNASKSEIKSAYRKLARSYHPDVN-KEPNAEQHLKEISNAYEVLSDDEKRSLNDKFGEAGLK-----GAGMGMG--DFSNPF-DLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            A  DYY VLGV R A ++E+K AYR+LA  YHPD N  + +AE+  KE++ AYEVLSD  KR   D++G AG+      GAG G G  +FS+ F D+F   F                       G D  Y+L +N +EAV G    I +  L  C TC
Sbjct:    2 AKRDYYEVLGVERGAGEAELKKAYRRLAMKYHPDRNPDDKSAEEKFKEVNEAYEVLSDAGKRMAYDQYGHAGVDQSMGGGAGFGAGGANFSDIFGDVFSDFFGAGRAGARGGPQR----------GSDLRYTLELNLEEAVRGTTVTIRVPTLVHCKTC 150          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ2_MYCLE (Chaperone protein dnaJ 2 OS=Mycobacterium leprae GN=dnaJ2 PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 3.984e-20
Identity = 58/149 (38.93%), Postives = 76/149 (51.01%), Query Frame = 3
Query:  222 DYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNKEPNAEQHLKEISNAYEVLSDDEKRSLNDKFGEAGLKGAG--MGMGDFSNPFDLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            DYY +LGVSRNAS ++IK AYRKLAR  HPD+N +  A+   KEIS AYEVLSD EKR + D  G+     A    G G F    D+FE+ F G+                    G D    + ++ +E   GV K++ +     C  C
Sbjct:    4 DYYGLLGVSRNASDADIKRAYRKLARELHPDINPDEAAQAKFKEISMAYEVLSDPEKRRIVDLGGDPMENAAASPSGFGGFGGLGDVFEAFFGGSSASRGPIGRVR--------PGSDSLLPMWLDLEECATGVTKQVTVDTAVLCDRC 144          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_THENN (Chaperone protein dnaJ OS=Thermotoga neapolitana (strain ATCC 49049 / DSM 4359 / NS-E) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 5.204e-20
Identity = 58/158 (36.71%), Postives = 81/158 (51.27%), Query Frame = 3
Query:  210 RADSDYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNKE--PNAEQHLKEISNAYEVLSDDEKRSLNDKFGEAG----LKGAGMGMGDFSNPFDLFESLFEGTXXXXXXXXXXXXXXXXXXV-DGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            R   DYY +LGV RNA++ EI+ AY++L + +HPD + E    AEQ  KEI  AYEVLSD +KR++ D+FG  G     + A  G   F + F  FE++F                        G+D  Y++ +N  + + G E  IE  R ETC  C
Sbjct:    3 REKKDYYEILGVPRNATQEEIRKAYKRLVKEWHPDRHPENRKEAEQRFKEIQEAYEVLSDPQKRAMYDRFGYVGEQPVYQEAETGGSFFEDVFREFENIFNRDIFDVFFGEESGRRERREYARRGEDIRYTIEVNLSDLINGTEIPIEYERYETCPRC 160          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_ROSDO (Chaperone protein dnaJ OS=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 5.204e-20
Identity = 63/165 (38.18%), Postives = 84/165 (50.91%), Query Frame = 3
Query:  213 ADSDYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNK-EPNAEQHLKEISNAYEVLSDDEKRSLNDKFGEAGLKGAGMGMG-------------DFSNPF-DLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            A  DYY VLGVS+ AS  +IK  YR+ A+  HPD NK +PNAE   KE + AYEVL D +K++  D++G A  +G GMG G             DFS+ F D+F+ LF                       G D  Y+L IN ++A  G++K I +     C TC
Sbjct:    2 AKRDYYEVLGVSKGASSDDIKKGYRRKAKELHPDRNKDDPNAEAQFKEANEAYEVLKDADKKAAYDRYGHAAFEG-GMGGGGGGRPGGGFGGGQDFSSAFSDVFDDLFGNFAGGGQRGGGNRASR------GSDLRYNLQINLEDAFSGLQKTINVPTSIGCKTC 159          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_RICAH (Chaperone protein dnaJ OS=Rickettsia akari (strain Hartford) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 5.204e-20
Identity = 55/153 (35.95%), Postives = 77/153 (50.33%), Query Frame = 3
Query:  222 DYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNKEPNAEQHLKEISNAYEVLSDDEKRSLNDKFG------EAGLKGAGMGMGDFSNPFDLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            DYY +LGVS+ AS++++K AY KLA+ YHPD   + +AE+  KEI+ AY+VL D++KR+  D+FG      +    G G   G   +  D+F   F                       G D  Y L IN +EA  G+EK I  +    C TC
Sbjct:    4 DYYKILGVSKTASQADLKKAYLKLAKQYHPDTTDDKDAEKKFKEINRAYDVLKDEQKRAAYDRFGHDTFQNQQSRGGGGSHAGFHHDINDIFGDFFS------DFMGGGRRKPTSSKARGSDLKYDLTINLEEAFHGIEKNISFSSEVKCDTC 150          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_RALME (Chaperone protein dnaJ OS=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 5.204e-20
Identity = 60/160 (37.50%), Postives = 81/160 (50.62%), Query Frame = 3
Query:  213 ADSDYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNKE-PNAEQHLKEISNAYEVLSDDEKRSLNDKFGEAGLK--------GAGMGMGDFSNPF-DLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            A  DYY VLGV +NAS  EIK AYRKLA  +HPD N +   AE+  KE+  AYE+LSD EK++  D++G AG+         G G G G F+  F D+F  +F                       G D  YS+ I+ ++A  G E +I +   + C  C
Sbjct:    2 AKRDYYEVLGVGKNASDDEIKKAYRKLAMKHHPDRNPDNKEAEEKFKEVKEAYEMLSDPEKKAAYDQYGHAGVDPNMAGGFGGGGFGGGGFAEAFGDIFGDIF------GQAAGGGRRGGGPQAYRGADLRYSMEISLEQAAHGHEAQIRVPHWDDCEHC 155          
The following BLAST results are available for this feature:
BLAST of CN184579 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAJ_PARDP3.984e-2038.61Chaperone protein dnaJ OS=Paracoccus denitrificans... [more]
DNAJ_DIAST3.984e-2037.97Chaperone protein dnaJ OS=Diaphorobacter sp. (stra... [more]
DNAJ_CHLCH3.984e-2036.09Chaperone protein dnaJ OS=Chlorobium chlorochromat... [more]
DNAJ_CHLAB3.984e-2038.41Chaperone protein dnaJ OS=Chlamydophila abortus GN... [more]
DNAJ_AZOVD3.984e-2040.25Chaperone protein dnaJ OS=Azotobacter vinelandii (... [more]
DNAJ2_MYCLE3.984e-2038.93Chaperone protein dnaJ 2 OS=Mycobacterium leprae G... [more]
DNAJ_THENN5.204e-2036.71Chaperone protein dnaJ OS=Thermotoga neapolitana (... [more]
DNAJ_ROSDO5.204e-2038.18Chaperone protein dnaJ OS=Roseobacter denitrifican... [more]
DNAJ_RICAH5.204e-2035.95Chaperone protein dnaJ OS=Rickettsia akari (strain... [more]
DNAJ_RALME5.204e-2037.50Chaperone protein dnaJ OS=Ralstonia metallidurans ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0005L18_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0005L18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184579 ID=CN184579; Name=CN184579; organism=Citrus sinensis; type=EST; length=664bp
GAGGGTCCACTTTTCACTTCTTTGACCACAATTGCCCTTATGCCAGTTGG
GGAGGGAAAAGAGGCCTGCTGCAAGAAGACATCGCAAGCAGGTTAAGCTG
TCTGGCTGCTCCAAGTTCAAGCTTTTTTTCACGCGATTCCTTCTCTTTGT
TTTCTTATGCTAGTCCATCTCAGACTTCATACCGTCGTAGGGGAGCACGA
TTGATCGTTAGAGCTGATAGTGACTACTATTCAGTTCTAGGGGTGTCAAG
AAATGCAAGTAAATCTGAAATTAAAAGCGCTTATCGGAAGCTTGCAAGGA
GTTATCACCCGGATGTAAACAAAGAACCTAATGCAGAACAGCATCTCAAG
GAAATTAGCAATGCATATGAGGTTCTGTCAGATGATGAGAAACGTTCTTT
AAATGACAAATTTGGGGAGGCTGGACTTAAAGGTGCTGGTATGGGCATGG
GGGATTTCAGCAATCCTTTCGATTTGTTTGAATCACTATTTGAGGGCACG
GGTGGTATGGGCGGAATGGGGAGCATGGGGAGCAGAGCTTCCAGGAGCAG
AGCAGTTGATGGACAAGATGAATATTACAGCCTTGTCATAAATTTCAAAG
AAGCTGTTTTTGGCGTTGAAAAGGAGATTGAGATAACACGTCTTGAGACC
TGTGGCACTTGCCA
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