CN184579

Overview
NameCN184579
Unique NameCN184579
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length664
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_HALHL (Chaperone protein dnaJ OS=Halorhodospira halophila (strain DSM 244 / SL1) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 8.876e-20
Identity = 60/164 (36.59%), Postives = 87/164 (53.05%), Query Frame = 3
Query:  213 ADSDYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNK-EPNAEQHLKEISNAYEVLSDDEKRSLNDKFGEAGLK------------GAGMGMGDFSNPF-DLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            A  DYY VLGV++NAS +EIK AYR++A+ +HPD N  +  + +  KE+  AYEVLSD +KR+  D+FG AG+             GAG G  DFS+ F D+F  +F                       G D  Y+L ++ ++AV G E++I++     C  C
Sbjct:    2 AKRDYYEVLGVNKNASDAEIKKAYRRMAQKFHPDRNPGDEESAERFKEVKEAYEVLSDAQKRAAYDQFGHAGVDPSAGGGPRGYGGGAGPGGPDFSDIFSDVFGDIF--------GSGGGRGGGRSRAFRGADLRYTLELSLEDAVRGTEEQIQVPTHVECDAC 157          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_CHLTR (Chaperone protein dnaJ OS=Chlamydia trachomatis GN=dnaJ PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 8.876e-20
Identity = 62/169 (36.69%), Postives = 84/169 (49.70%), Query Frame = 3
Query:  222 DYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNK-EPNAEQHLKEISNAYEVLSDDEKRSLNDKFGE-------AGLKGAGMG---------MGDFSNPF-----DLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            DYY++LGV++ A+  EIK AYRKLA  YHPD N  +  AE+  KE+S AYEVL D +KR   D++G+        G  GAGMG         MG F   F       FE LF G                     G  +   + ++F+EA  GVEKE+ ++  ++C  C
Sbjct:    2 DYYTILGVAKTATPEEIKKAYRKLAVKYHPDKNPGDAEAERRFKEVSEAYEVLGDAQKRESYDRYGKDGPFAGAGGFGGAGMGNMEDALRTFMGAFGGDFGGNGGGFFEGLFGGLGEAFGMRGGSESSR-----QGASKKVHITLSFEEAAKGVEKELLVSGYKSCDAC 165          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_CHLTB (Chaperone protein dnaJ OS=Chlamydia trachomatis (strain L2b/UCH-1/proctitis) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 8.876e-20
Identity = 62/169 (36.69%), Postives = 84/169 (49.70%), Query Frame = 3
Query:  222 DYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNK-EPNAEQHLKEISNAYEVLSDDEKRSLNDKFGE-------AGLKGAGMG---------MGDFSNPF-----DLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            DYY++LGV++ A+  EIK AYRKLA  YHPD N  +  AE+  KE+S AYEVL D +KR   D++G+        G  GAGMG         MG F   F       FE LF G                     G  +   + ++F+EA  GVEKE+ ++  ++C  C
Sbjct:    2 DYYTILGVAKTATPEEIKKAYRKLAVKYHPDKNPGDAEAERRFKEVSEAYEVLGDAQKRESYDRYGKDGPFAGAGGFGGAGMGNMEDALRTFMGAFGGDFGGNGGGFFEGLFGGLGEAFGMRGGSESSR-----QGASKKVHITLSFEEAAKGVEKELLVSGYKSCDAC 165          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_CHLTA (Chaperone protein dnaJ OS=Chlamydia trachomatis (strain A/HAR-13 / ATCC VR-571B) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 8.876e-20
Identity = 62/169 (36.69%), Postives = 84/169 (49.70%), Query Frame = 3
Query:  222 DYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNK-EPNAEQHLKEISNAYEVLSDDEKRSLNDKFGE-------AGLKGAGMG---------MGDFSNPF-----DLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            DYY++LGV++ A+  EIK AYRKLA  YHPD N  +  AE+  KE+S AYEVL D +KR   D++G+        G  GAGMG         MG F   F       FE LF G                     G  +   + ++F+EA  GVEKE+ ++  ++C  C
Sbjct:    2 DYYTILGVAKTATPEEIKKAYRKLAVKYHPDKNPGDAEAERRFKEVSEAYEVLGDAQKRESYDRYGKDGPFAGAGGFGGAGMGNMEDALRTFMGAFGGDFGGNGGGFFEGLFGGLGEAFGMRGGSESSR-----QGASKKVHITLSFEEAAKGVEKELLVSGYKSCDAC 165          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_CHLT2 (Chaperone protein dnaJ OS=Chlamydia trachomatis (strain L2/434/Bu / ATCC VR-902B) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 8.876e-20
Identity = 62/169 (36.69%), Postives = 84/169 (49.70%), Query Frame = 3
Query:  222 DYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNK-EPNAEQHLKEISNAYEVLSDDEKRSLNDKFGE-------AGLKGAGMG---------MGDFSNPF-----DLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            DYY++LGV++ A+  EIK AYRKLA  YHPD N  +  AE+  KE+S AYEVL D +KR   D++G+        G  GAGMG         MG F   F       FE LF G                     G  +   + ++F+EA  GVEKE+ ++  ++C  C
Sbjct:    2 DYYTILGVAKTATPEEIKKAYRKLAVKYHPDKNPGDAEAERRFKEVSEAYEVLGDAQKRESYDRYGKDGPFAGAGGFGGAGMGNMEDALRTFMGAFGGDFGGNGGGFFEGLFGGLGEAFGMRGGSESSR-----QGASKKVHITLSFEEAAKGVEKELLVSGYKSCDAC 165          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_CHLMU (Chaperone protein dnaJ OS=Chlamydia muridarum GN=dnaJ PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 8.876e-20
Identity = 62/169 (36.69%), Postives = 84/169 (49.70%), Query Frame = 3
Query:  222 DYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNK-EPNAEQHLKEISNAYEVLSDDEKRSLNDKFGE-------AGLKGAGMG---------MGDFSNPF-----DLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            DYY++LGV++ A+  EIK AYRKLA  YHPD N  +  AE+  KE+S AYEVL D +KR   D++G+        G  GAGMG         MG F   F       FE LF G                     G  +   + ++F+EA  GVEKE+ ++  ++C  C
Sbjct:    2 DYYTILGVAKTATPEEIKKAYRKLAVKYHPDKNPGDAEAERRFKEVSEAYEVLGDAQKRESYDRYGKDGPFAGAGGFGGAGMGNMEDALRTFMGAFGGDFGGNGGGFFEGLFGGLGEAFGMRGGSEGAR-----QGASKKVHITLSFEEAAKGVEKELLVSGYKSCDAC 165          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_ACIAC (Chaperone protein dnaJ OS=Acidovorax avenae subsp. citrulli (strain AAC00-1) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 8.876e-20
Identity = 64/159 (40.25%), Postives = 81/159 (50.94%), Query Frame = 3
Query:  222 DYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNK---EPNAEQHLKEISNAYEVLSDDEKRSLNDKFGEAGLK-------GAGM-GMGDFSNPF-DLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            D+Y VLGV +NAS  EIK AYRKLA  +HPD N+      AE+  KE   AYE+LSD +KR+  D+FG AG+        GAG  G G F+  F D+F  +F G                     G D  Y++ I  +EA  G E +I I   E C TC
Sbjct:    5 DFYEVLGVPKNASDEEIKKAYRKLAMKHHPDRNQGDAAKPAEEKFKEAKEAYEMLSDPQKRAAYDQFGHAGVDPNMRGPGGAGAEGFGGFAEAFGDIFGDMFGGRRGAGGGRQVYR---------GNDLSYAMDITLEEAAKGKEAQIRIPSWENCETC 154          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ1_CERAE (DnaJ homolog subfamily A member 1 OS=Cercopithecus aethiops GN=DNAJA1 PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 8.876e-20
Identity = 50/94 (53.19%), Postives = 62/94 (65.96%), Query Frame = 3
Query:  216 DSDYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNKEPNAEQHLKEISNAYEVLSDDEKRSLNDKFGEAGLKGAGMGMGDFSNPFDLFESLFEG 497
            ++ YY VLGV  NA++ E+K AYRKLA  YHPD  K PN  +  K+IS AYEVLSD +KR L DK GE  +K  G G G F +P D+F+  F G
Sbjct:    4 ETTYYDVLGVKPNATQEELKKAYRKLALKYHPD--KNPNEGEKFKQISQAYEVLSDAKKRELYDKGGEQAIKEGGAG-GGFGSPMDIFDMFFGG 94          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNJA1_RAT (DnaJ homolog subfamily A member 1 OS=Rattus norvegicus GN=Dnaja1 PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.159e-19
Identity = 49/94 (52.13%), Postives = 62/94 (65.96%), Query Frame = 3
Query:  216 DSDYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNKEPNAEQHLKEISNAYEVLSDDEKRSLNDKFGEAGLKGAGMGMGDFSNPFDLFESLFEG 497
            ++ YY VLGV  NA++ E+K AYRKLA  YHPD  K PN  +  K+IS AYEVL+D +KR L DK GE  +K  G G G F +P D+F+  F G
Sbjct:    4 ETTYYDVLGVKPNATQEELKKAYRKLALKYHPD--KNPNEGEKFKQISQAYEVLADSKKRELYDKGGEQAIKEGGAG-GGFGSPMDIFDMFFGG 94          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNJA1_MOUSE (DnaJ homolog subfamily A member 1 OS=Mus musculus GN=Dnaja1 PE=1 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.159e-19
Identity = 49/94 (52.13%), Postives = 62/94 (65.96%), Query Frame = 3
Query:  216 DSDYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNKEPNAEQHLKEISNAYEVLSDDEKRSLNDKFGEAGLKGAGMGMGDFSNPFDLFESLFEG 497
            ++ YY VLGV  NA++ E+K AYRKLA  YHPD  K PN  +  K+IS AYEVL+D +KR L DK GE  +K  G G G F +P D+F+  F G
Sbjct:    4 ETTYYDVLGVKPNATQEELKKAYRKLALKYHPD--KNPNEGEKFKQISQAYEVLADSKKRELYDKGGEQAIKEGGAG-GGFGSPMDIFDMFFGG 94          
The following BLAST results are available for this feature:
BLAST of CN184579 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAJ_HALHL8.876e-2036.59Chaperone protein dnaJ OS=Halorhodospira halophila... [more]
DNAJ_CHLTR8.876e-2036.69Chaperone protein dnaJ OS=Chlamydia trachomatis GN... [more]
DNAJ_CHLTB8.876e-2036.69Chaperone protein dnaJ OS=Chlamydia trachomatis (s... [more]
DNAJ_CHLTA8.876e-2036.69Chaperone protein dnaJ OS=Chlamydia trachomatis (s... [more]
DNAJ_CHLT28.876e-2036.69Chaperone protein dnaJ OS=Chlamydia trachomatis (s... [more]
DNAJ_CHLMU8.876e-2036.69Chaperone protein dnaJ OS=Chlamydia muridarum GN=d... [more]
DNAJ_ACIAC8.876e-2040.25Chaperone protein dnaJ OS=Acidovorax avenae subsp.... [more]
DNAJ1_CERAE8.876e-2053.19DnaJ homolog subfamily A member 1 OS=Cercopithecus... [more]
DNJA1_RAT1.159e-1952.13DnaJ homolog subfamily A member 1 OS=Rattus norveg... [more]
DNJA1_MOUSE1.159e-1952.13DnaJ homolog subfamily A member 1 OS=Mus musculus ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0005L18_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0005L18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184579 ID=CN184579; Name=CN184579; organism=Citrus sinensis; type=EST; length=664bp
GAGGGTCCACTTTTCACTTCTTTGACCACAATTGCCCTTATGCCAGTTGG
GGAGGGAAAAGAGGCCTGCTGCAAGAAGACATCGCAAGCAGGTTAAGCTG
TCTGGCTGCTCCAAGTTCAAGCTTTTTTTCACGCGATTCCTTCTCTTTGT
TTTCTTATGCTAGTCCATCTCAGACTTCATACCGTCGTAGGGGAGCACGA
TTGATCGTTAGAGCTGATAGTGACTACTATTCAGTTCTAGGGGTGTCAAG
AAATGCAAGTAAATCTGAAATTAAAAGCGCTTATCGGAAGCTTGCAAGGA
GTTATCACCCGGATGTAAACAAAGAACCTAATGCAGAACAGCATCTCAAG
GAAATTAGCAATGCATATGAGGTTCTGTCAGATGATGAGAAACGTTCTTT
AAATGACAAATTTGGGGAGGCTGGACTTAAAGGTGCTGGTATGGGCATGG
GGGATTTCAGCAATCCTTTCGATTTGTTTGAATCACTATTTGAGGGCACG
GGTGGTATGGGCGGAATGGGGAGCATGGGGAGCAGAGCTTCCAGGAGCAG
AGCAGTTGATGGACAAGATGAATATTACAGCCTTGTCATAAATTTCAAAG
AAGCTGTTTTTGGCGTTGAAAAGGAGATTGAGATAACACGTCTTGAGACC
TGTGGCACTTGCCA
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