CN184579

Overview
NameCN184579
Unique NameCN184579
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length664
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_VIBPA (Chaperone protein dnaJ OS=Vibrio parahaemolyticus GN=dnaJ PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.159e-19
Identity = 58/157 (36.94%), Postives = 85/157 (54.14%), Query Frame = 3
Query:  222 DYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNK-EPNAEQHLKEISNAYEVLSDDEKRSLNDKFGEAGLKGAGMGMG--------DFSNPF-DLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            D+Y VLGVSR+AS+ +IK AY++LA  +HPD N+ + +A    KE+  AYEVL+D +K++  D++G A  +  G G G        DF + F D+F  +F G                     G D  Y++ +  +EAV GV KEIE+  L  C +C
Sbjct:    5 DFYEVLGVSRDASERDIKKAYKRLAMKFHPDRNQGDESAADKFKEVKEAYEVLTDSQKKAAYDQYGHAAFEQGGGGFGGGFGGGGADFGDIFGDVFGDIFGGGRRGGGGHRAQR---------GADLRYNMELTLEEAVRGVTKEIEVPTLVHCDSC 152          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_VIBHB (Chaperone protein dnaJ OS=Vibrio harveyi (strain ATCC BAA-1116 / BB120) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.159e-19
Identity = 59/157 (37.58%), Postives = 86/157 (54.78%), Query Frame = 3
Query:  222 DYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNK-EPNAEQHLKEISNAYEVLSDDEKRSLNDKFGEA------GLKGAGMGMG--DFSNPF-DLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            D+Y VLGV R+AS+ +IK AY++LA  +HPD N+ + +A    KE+  AYE+L+D +K++  D++G A      G  G G G G  DF + F D+F  +F G                     G D  Y++ ++ +EAV GV KEIE+  L  C TC
Sbjct:    5 DFYEVLGVGRDASERDIKKAYKRLAMKFHPDRNQGDESAADKFKEVKEAYEILTDPQKKAAYDQYGHAAFEQGGGFGGGGFGGGGADFGDIFGDVFGDIFGGGRRGGGQQRAQR---------GADLRYNMELSLEEAVRGVSKEIEVPTLVHCDTC 152          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_VIBF1 (Chaperone protein dnaJ OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.159e-19
Identity = 58/156 (37.18%), Postives = 85/156 (54.49%), Query Frame = 3
Query:  222 DYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNK-EPNAEQHLKEISNAYEVLSDDEKRSLNDKFGEAGLKGAGMGMG-------DFSNPF-DLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            D+Y VLGVSR+AS+ +IK AY++LA  +HPD N+ +  A +  KE+  AYE+L+D +KRS  D++G A  +  GMG G       DF + F D+F  +F G                     G D  Y++ +  +EA  G +KEIE+  L +C  C
Sbjct:    5 DFYEVLGVSRDASERDIKKAYKRLAMKFHPDRNQGDDTAAEKFKEVKVAYEILTDAQKRSAYDQYGHAAFEQGGMGGGGFGGGGADFGDIFGDVFGDIFGGGRRGGQQRAQR----------GSDLRYNMELTLEEAGRGCDKEIEVPTLVSCDPC 150          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_PSEPK (Chaperone protein dnaJ OS=Pseudomonas putida (strain KT2440) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.159e-19
Identity = 60/155 (38.71%), Postives = 80/155 (51.61%), Query Frame = 3
Query:  222 DYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNK-EPNAEQHLKEISNAYEVLSDDEKRSLNDKFGEAGLK------GAGMGMGDFSNPF-DLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            DYY VLGV R A+++++K AYR+LA  YHPD N  +  +E   KE + AYEVLSD  KR+  D++G AG+       GAG G  +FS+ F D+F   F G                     G D  Y+L +N +EAV G    I +  L  C  C
Sbjct:    5 DYYEVLGVERGATEADLKKAYRRLAMKYHPDRNPGDKESEDKFKEANEAYEVLSDASKRAAFDQYGHAGVDPSMGGGGAGFGGANFSDIFGDVFSDFFGGGGRGGGRGGAQR---------GSDLRYTLELNLEEAVRGTTVSIRVPTLVNCQPC 150          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_PSEP1 (Chaperone protein dnaJ OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.159e-19
Identity = 60/155 (38.71%), Postives = 80/155 (51.61%), Query Frame = 3
Query:  222 DYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNK-EPNAEQHLKEISNAYEVLSDDEKRSLNDKFGEAGLK------GAGMGMGDFSNPF-DLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            DYY VLGV R A+++++K AYR+LA  YHPD N  +  +E   KE + AYEVLSD  KR+  D++G AG+       GAG G  +FS+ F D+F   F G                     G D  Y+L +N +EAV G    I +  L  C  C
Sbjct:    5 DYYEVLGVERGATEADLKKAYRRLAMKYHPDRNPGDKESEDKFKEANEAYEVLSDASKRAAFDQYGHAGVDPSMGGGGAGFGGANFSDIFGDVFSDFFGGGRGGGRGGAQR----------GSDLRYTLELNLEEAVRGTTVSIRVPTLVNCQPC 149          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_ORITB (Chaperone protein dnaJ OS=Orientia tsutsugamushi (strain Boryong) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.159e-19
Identity = 59/158 (37.34%), Postives = 79/158 (50.00%), Query Frame = 3
Query:  213 ADSDYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNK-EPNAEQHLKEISNAYEVLSDDEKRSLNDKFGEAGLKGAG-------MGMGDFSNPFDLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            +D DYY VLGVSR AS+ EIK AYRKL   YHPD N  + NAEQ +K I+ AY++L D++KRS  D+ G    K +G        G     +P D+FE++F                       G +  Y + +  +EA +GV K I      TC  C
Sbjct:    2 SDLDYYQVLGVSRTASQEEIKRAYRKLVLKYHPDHNPGDKNAEQKIKNINEAYDILKDEKKRSAYDQLGHQAFKNSGGGNYQQHHGFTGGIDPNDIFENIF-----GDFMGARRSSKTAFSKKAGANLKYDISLTLEEAFYGVTKIISFKTALTCDAC 154          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_ENT38 (Chaperone protein dnaJ OS=Enterobacter sp. (strain 638) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.159e-19
Identity = 60/164 (36.59%), Postives = 83/164 (50.61%), Query Frame = 3
Query:  213 ADSDYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNK-EPNAEQHLKEISNAYEVLSDDEKRSLNDKFGEAGLKGAGMGMG------------DFSNPF-DLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            A  D+Y +LGV + A + EIK AY++LA  +HPD N+ +  AE   KEI  AYE+L+D +KR+  D++G A  +  GMG G            DF + F D+F  +F G                     G D  Y++ +  +EAV GV KEI I  LE C  C
Sbjct:    2 AKQDFYEILGVPKTAEEREIKKAYKRLAMKFHPDRNQGDKEAEAKFKEIKEAYEILTDAQKRAAYDQYGHAAFEQGGMGGGGYGGGGFGGGGADFGDIFGDVFGDIFGGGRGRQRASR------------GADLRYNMELTLEEAVRGVTKEIRIPTLEECDIC 153          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_BORPE (Chaperone protein dnaJ OS=Bordetella pertussis GN=dnaJ PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.159e-19
Identity = 62/170 (36.47%), Postives = 83/170 (48.82%), Query Frame = 3
Query:  213 ADSDYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNKEPN-AEQHLKEISNAYEVLSDDEKRSLNDKFGEAGLK------------------GAGMGMGDFSNPF-DLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            A  DYY VLGV++NAS  ++K AYRKLA  YHPD N +   AE+  KE   AYEVL D++KR+  D++G AG+                   G GMG G F++ F D+F  +F                       G D  Y+L I  ++A  G + EI +   E C TC
Sbjct:    2 AKRDYYEVLGVAKNASDEDLKKAYRKLAMKYHPDRNPDSKEAEEKFKEAKEAYEVLGDEQKRAAYDRYGHAGVDPNAAGMGGGMGGGMGGGMGGGMG-GGFADAFGDIFGEIFGAGRRGGGGPQVYR---------GADLKYALEITLEQAASGFDTEIRVPSWENCDTC 161          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ2_MYCTU (Chaperone protein dnaJ 2 OS=Mycobacterium tuberculosis GN=dnaJ2 PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.159e-19
Identity = 57/149 (38.26%), Postives = 75/149 (50.34%), Query Frame = 3
Query:  222 DYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNKEPNAEQHLKEISNAYEVLSDDEKRSLNDKFGE--AGLKGAGMGMGDFSNPFDLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            DYY +LGVS+NAS ++IK AYRKLAR  HPDVN +  A+   KEIS AYEVLSD +KR + D  G+        G G G F    D+FE+ F G                     G D    + ++ +E   GV K++ +     C  C
Sbjct:    4 DYYGLLGVSKNASDADIKRAYRKLARELHPDVNPDEAAQAKFKEISVAYEVLSDPDKRRIVDLGGDPLESAAAGGNGFGGFGGLGDVFEAFFGGGFGGGAASRGPIGRVR----PGSDSLLRMRLDLEECATGVTKQVTVDTAVLCDRC 148          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ2_MYCBO (Chaperone protein dnaJ 2 OS=Mycobacterium bovis GN=dnaJ2 PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.159e-19
Identity = 57/149 (38.26%), Postives = 75/149 (50.34%), Query Frame = 3
Query:  222 DYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNKEPNAEQHLKEISNAYEVLSDDEKRSLNDKFGE--AGLKGAGMGMGDFSNPFDLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            DYY +LGVS+NAS ++IK AYRKLAR  HPDVN +  A+   KEIS AYEVLSD +KR + D  G+        G G G F    D+FE+ F G                     G D    + ++ +E   GV K++ +     C  C
Sbjct:    4 DYYGLLGVSKNASDADIKRAYRKLARELHPDVNPDEAAQAKFKEISVAYEVLSDPDKRRIVDLGGDPLESAAAGGNGFGGFGGLGDVFEAFFGGGFGGGAASRGPIGRVR----PGSDSLLRMRLDLEECATGVTKQVTVDTAVLCDRC 148          
The following BLAST results are available for this feature:
BLAST of CN184579 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAJ_VIBPA1.159e-1936.94Chaperone protein dnaJ OS=Vibrio parahaemolyticus ... [more]
DNAJ_VIBHB1.159e-1937.58Chaperone protein dnaJ OS=Vibrio harveyi (strain A... [more]
DNAJ_VIBF11.159e-1937.18Chaperone protein dnaJ OS=Vibrio fischeri (strain ... [more]
DNAJ_PSEPK1.159e-1938.71Chaperone protein dnaJ OS=Pseudomonas putida (stra... [more]
DNAJ_PSEP11.159e-1938.71Chaperone protein dnaJ OS=Pseudomonas putida (stra... [more]
DNAJ_ORITB1.159e-1937.34Chaperone protein dnaJ OS=Orientia tsutsugamushi (... [more]
DNAJ_ENT381.159e-1936.59Chaperone protein dnaJ OS=Enterobacter sp. (strain... [more]
DNAJ_BORPE1.159e-1936.47Chaperone protein dnaJ OS=Bordetella pertussis GN=... [more]
DNAJ2_MYCTU1.159e-1938.26Chaperone protein dnaJ 2 OS=Mycobacterium tubercul... [more]
DNAJ2_MYCBO1.159e-1938.26Chaperone protein dnaJ 2 OS=Mycobacterium bovis GN... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0005L18_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0005L18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184579 ID=CN184579; Name=CN184579; organism=Citrus sinensis; type=EST; length=664bp
GAGGGTCCACTTTTCACTTCTTTGACCACAATTGCCCTTATGCCAGTTGG
GGAGGGAAAAGAGGCCTGCTGCAAGAAGACATCGCAAGCAGGTTAAGCTG
TCTGGCTGCTCCAAGTTCAAGCTTTTTTTCACGCGATTCCTTCTCTTTGT
TTTCTTATGCTAGTCCATCTCAGACTTCATACCGTCGTAGGGGAGCACGA
TTGATCGTTAGAGCTGATAGTGACTACTATTCAGTTCTAGGGGTGTCAAG
AAATGCAAGTAAATCTGAAATTAAAAGCGCTTATCGGAAGCTTGCAAGGA
GTTATCACCCGGATGTAAACAAAGAACCTAATGCAGAACAGCATCTCAAG
GAAATTAGCAATGCATATGAGGTTCTGTCAGATGATGAGAAACGTTCTTT
AAATGACAAATTTGGGGAGGCTGGACTTAAAGGTGCTGGTATGGGCATGG
GGGATTTCAGCAATCCTTTCGATTTGTTTGAATCACTATTTGAGGGCACG
GGTGGTATGGGCGGAATGGGGAGCATGGGGAGCAGAGCTTCCAGGAGCAG
AGCAGTTGATGGACAAGATGAATATTACAGCCTTGTCATAAATTTCAAAG
AAGCTGTTTTTGGCGTTGAAAAGGAGATTGAGATAACACGTCTTGAGACC
TGTGGCACTTGCCA
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