CN184579

Overview
NameCN184579
Unique NameCN184579
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length664
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_PSEAE (Chaperone protein dnaJ OS=Pseudomonas aeruginosa GN=dnaJ PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.514e-19
Identity = 62/159 (38.99%), Postives = 81/159 (50.94%), Query Frame = 3
Query:  213 ADSDYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNK-EPNAEQHLKEISNAYEVLSDDEKRSLNDKFGEAGL-------KGAGMGMGDFSNPF-DLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            A  D+Y VLGV R AS++++K AYR+LA  YHPD N  +  AE   KE + AYEVLSD  KR+  D++G AG+        GAG G   FS+ F D+F   F G                     G D  Y+L ++ +EAV G    I +  L  C TC
Sbjct:    2 AKRDFYEVLGVERGASEADLKKAYRRLAMKYHPDRNPGDKEAEDKFKEANEAYEVLSDASKRAAYDQYGHAGVDPNMGGGAGAGFGGASFSDIFGDVFSDFFGGGGARGGSRGGAQR--------GADLRYTLDLDLEEAVRGTTVTIRVPTLVGCKTC 152          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_PSEAB (Chaperone protein dnaJ OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.514e-19
Identity = 62/159 (38.99%), Postives = 81/159 (50.94%), Query Frame = 3
Query:  213 ADSDYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNK-EPNAEQHLKEISNAYEVLSDDEKRSLNDKFGEAGL-------KGAGMGMGDFSNPF-DLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            A  D+Y VLGV R AS++++K AYR+LA  YHPD N  +  AE   KE + AYEVLSD  KR+  D++G AG+        GAG G   FS+ F D+F   F G                     G D  Y+L ++ +EAV G    I +  L  C TC
Sbjct:    2 AKRDFYEVLGVERGASEADLKKAYRRLAMKYHPDRNPGDKEAEDKFKEANEAYEVLSDASKRAAYDQYGHAGVDPNMGGGAGAGFGGASFSDIFGDVFSDFFGGGGARGGSRGGAQR--------GADLRYTLDLDLEEAVRGTTVTIRVPTLVGCKTC 152          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_PSEA8 (Chaperone protein dnaJ OS=Pseudomonas aeruginosa (strain LESB58) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.514e-19
Identity = 62/159 (38.99%), Postives = 81/159 (50.94%), Query Frame = 3
Query:  213 ADSDYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNK-EPNAEQHLKEISNAYEVLSDDEKRSLNDKFGEAGL-------KGAGMGMGDFSNPF-DLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            A  D+Y VLGV R AS++++K AYR+LA  YHPD N  +  AE   KE + AYEVLSD  KR+  D++G AG+        GAG G   FS+ F D+F   F G                     G D  Y+L ++ +EAV G    I +  L  C TC
Sbjct:    2 AKRDFYEVLGVERGASEADLKKAYRRLAMKYHPDRNPGDKEAEDKFKEANEAYEVLSDASKRAAYDQYGHAGVDPNMGGGAGAGFGGASFSDIFGDVFSDFFGGGGARGGSRGGAQR--------GADLRYTLDLDLEEAVRGTTVTIRVPTLVGCKTC 152          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_PSEA7 (Chaperone protein dnaJ OS=Pseudomonas aeruginosa (strain PA7) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.514e-19
Identity = 62/159 (38.99%), Postives = 81/159 (50.94%), Query Frame = 3
Query:  213 ADSDYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNK-EPNAEQHLKEISNAYEVLSDDEKRSLNDKFGEAGL-------KGAGMGMGDFSNPF-DLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            A  D+Y VLGV R AS++++K AYR+LA  YHPD N  +  AE   KE + AYEVLSD  KR+  D++G AG+        GAG G   FS+ F D+F   F G                     G D  Y+L ++ +EAV G    I +  L  C TC
Sbjct:    2 AKRDFYEVLGVERGASEADLKKAYRRLAMKYHPDRNPGDKEAEDKFKEANEAYEVLSDASKRAAYDQYGHAGVDPNMGGGAGAGFGGASFSDIFGDVFSDFFGGGGGRGGARGGAQR--------GADLRYTLDLDLEEAVRGTTVTIRVPTLVGCKTC 152          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_POLSJ (Chaperone protein dnaJ OS=Polaromonas sp. (strain JS666 / ATCC BAA-500) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.514e-19
Identity = 62/161 (38.51%), Postives = 80/161 (49.69%), Query Frame = 3
Query:  213 ADSDYYSVLGVSRNASKSEIKSAYRKLARSYHPDVN---KEPNAEQHLKEISNAYEVLSDDEKRSLNDKFGEAG----LKGAG---MGMGDFSNPF-DLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            A  DYY  LGV +NAS  +IK AYRKLA  +HPD N   K   +E+  KE   AYEVLSD+ KR   D++G AG    ++G G    G G F+  F D+F  +F G                     G D  Y++ I  +EA  G E +I I   + C TC
Sbjct:    2 AKKDYYDTLGVPKNASDDDIKKAYRKLAMKHHPDRNQGDKSKVSEEKFKEAKEAYEVLSDENKRMAYDQYGHAGVDPNMRGGGPGAEGFGGFAEAFGDIFGDVFGGQRGGQQRGGRQVYR-------GGDLSYAMEITLEEAAHGKEAQIRIPSWDDCNTC 155          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_PHOPR (Chaperone protein dnaJ OS=Photobacterium profundum GN=dnaJ PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.514e-19
Identity = 56/155 (36.13%), Postives = 83/155 (53.55%), Query Frame = 3
Query:  222 DYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNKEPNAEQHLKEISNAYEVLSDDEKRSLNDKFG----EAGLKGAGMGMG---DFSNPF-DLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            D+Y VLGV R+A + +IK AY++LA  +HPD N+E +A +  KE+  AYE+L+D +K++  D++G    E G  G G G G   DF + F D+F  +F G                     G D  Y++ +  +EAV G  KEI +  L  C +C
Sbjct:    5 DFYEVLGVGRDAGERDIKKAYKRLAMKFHPDRNQEADATEKFKEVKTAYEILTDPQKKAAYDQYGHAAFEQGSGGGGYGGGGGADFGDIFGDVFGDIFGGAGGGRRQQQRAQR--------GSDLRYNMELTLEEAVRGCSKEIRVPTLVGCDSC 151          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_HYDTH (Chaperone protein dnaJ OS=Hydrogenobacter thermophilus GN=dnaJ PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.514e-19
Identity = 53/147 (36.05%), Postives = 80/147 (54.42%), Query Frame = 3
Query:  222 DYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNKEPNAEQHLKEISNAYEVLSDDEKRSLNDKFGEAGLKGAGMGMGDFSNPFDLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            DYY +LGVS++A+  EIK AYR+LA+ YHPD++ + NA +  KEI+ AY +LSD+E+R   D+  ++G + +     ++    D  ES+++G                     G D    L +  +EA FG EK+IE  R   C TC
Sbjct:    5 DYYQILGVSKDATAEEIKKAYRRLAKEYHPDISADENASEKFKEINEAYHILSDEERRKEYDRILKSGDEKSYRDFMEYIQ--DFLESIWQGMRRSPKPK------------KGGDVRLKLELTLEEAAFGCEKDIEYERWIDCPTC 137          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_HALWD (Chaperone protein dnaJ OS=Haloquadratum walsbyi (strain DSM 16790) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.514e-19
Identity = 62/169 (36.69%), Postives = 81/169 (47.93%), Query Frame = 3
Query:  222 DYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNKEPNAEQHLKEISNAYEVLSDDEKRSLNDKFG---------EAGLKGAGM------------GMGDFSNPF-DLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            D+Y VLGVSRNA   +IK AYRK A  YHPDV+ +PNAE+  K+I  A EVL+D EKR + D+ G           G+ G G             GMG   +PF D+FE  F G                     GQ+    + ++ +E   GVEK+  + R E C  C
Sbjct:    4 DFYDVLGVSRNADGDDIKQAYRKKAAKYHPDVSDDPNAEEKFKKIKKAKEVLTDGEKRQMYDQLGHDRFQQAEKRGGVGGGGNSSGGSARGDPFGGMGGQGSPFGDIFEQFFGGGQGQRRQGNRPR--------QGQNLQTRVQLDLEEVYTGVEKQFTVRRPEKCPDC 164          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_DINSH (Chaperone protein dnaJ OS=Dinoroseobacter shibae (strain DFL 12) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.514e-19
Identity = 57/163 (34.97%), Postives = 80/163 (49.08%), Query Frame = 3
Query:  213 ADSDYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNKE-PNAEQHLKEISNAYEVLSDDEKRSLNDKFGEAGLKG-----------AGMGMGDFSNPF-DLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            A  DYY VLGVS+ AS  EIK  +RK A+  HPD N + PNAE   KE + AY++L D +K++  D++G A  +             G G GDF++ F D+FE LF                       G D  Y+L I  ++A  G++K I +    +C  C
Sbjct:    2 AKRDYYDVLGVSKGASPDEIKKGFRKKAKELHPDRNSDNPNAEAQFKEANEAYDILKDPDKKAAYDRYGHAAFENGSGGPRGPGGFGGQGQGDFASAFSDVFEDLF------GDFMGGQRGGGRQRAARGSDLRYNLRITLEQAFMGMQKTISVPGTVSCSAC 158          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_CUPTR (Chaperone protein dnaJ OS=Cupriavidus taiwanensis (strain R1 / LMG 19424) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.514e-19
Identity = 59/159 (37.11%), Postives = 80/159 (50.31%), Query Frame = 3
Query:  213 ADSDYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNKE-PNAEQHLKEISNAYEVLSDDEKRSLNDKFGEAGLK-------GAGMGMGDFSNPF-DLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            A  DYY VLGV +NAS  EIK AYRKLA  +HPD N +  +AE+  KE   AYE+LSD EK++  D++G AG+        G   G G F+  F D+F  +F                       G D  YS+ I+ ++A  G E +I +   + C  C
Sbjct:    2 AKRDYYEVLGVGKNASDDEIKKAYRKLAMKFHPDRNPDSKDAEEKFKEAKEAYEMLSDPEKKAAYDQYGHAGVDPNMAGGFGGAQGYGGFAEAFGDIFGDIF-------GQGGGGRRGGGPQAYRGADLRYSMEISLEQAAHGHEAQIRVPHWDDCDHC 153          
The following BLAST results are available for this feature:
BLAST of CN184579 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAJ_PSEAE1.514e-1938.99Chaperone protein dnaJ OS=Pseudomonas aeruginosa G... [more]
DNAJ_PSEAB1.514e-1938.99Chaperone protein dnaJ OS=Pseudomonas aeruginosa (... [more]
DNAJ_PSEA81.514e-1938.99Chaperone protein dnaJ OS=Pseudomonas aeruginosa (... [more]
DNAJ_PSEA71.514e-1938.99Chaperone protein dnaJ OS=Pseudomonas aeruginosa (... [more]
DNAJ_POLSJ1.514e-1938.51Chaperone protein dnaJ OS=Polaromonas sp. (strain ... [more]
DNAJ_PHOPR1.514e-1936.13Chaperone protein dnaJ OS=Photobacterium profundum... [more]
DNAJ_HYDTH1.514e-1936.05Chaperone protein dnaJ OS=Hydrogenobacter thermoph... [more]
DNAJ_HALWD1.514e-1936.69Chaperone protein dnaJ OS=Haloquadratum walsbyi (s... [more]
DNAJ_DINSH1.514e-1934.97Chaperone protein dnaJ OS=Dinoroseobacter shibae (... [more]
DNAJ_CUPTR1.514e-1937.11Chaperone protein dnaJ OS=Cupriavidus taiwanensis ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0005L18_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0005L18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184579 ID=CN184579; Name=CN184579; organism=Citrus sinensis; type=EST; length=664bp
GAGGGTCCACTTTTCACTTCTTTGACCACAATTGCCCTTATGCCAGTTGG
GGAGGGAAAAGAGGCCTGCTGCAAGAAGACATCGCAAGCAGGTTAAGCTG
TCTGGCTGCTCCAAGTTCAAGCTTTTTTTCACGCGATTCCTTCTCTTTGT
TTTCTTATGCTAGTCCATCTCAGACTTCATACCGTCGTAGGGGAGCACGA
TTGATCGTTAGAGCTGATAGTGACTACTATTCAGTTCTAGGGGTGTCAAG
AAATGCAAGTAAATCTGAAATTAAAAGCGCTTATCGGAAGCTTGCAAGGA
GTTATCACCCGGATGTAAACAAAGAACCTAATGCAGAACAGCATCTCAAG
GAAATTAGCAATGCATATGAGGTTCTGTCAGATGATGAGAAACGTTCTTT
AAATGACAAATTTGGGGAGGCTGGACTTAAAGGTGCTGGTATGGGCATGG
GGGATTTCAGCAATCCTTTCGATTTGTTTGAATCACTATTTGAGGGCACG
GGTGGTATGGGCGGAATGGGGAGCATGGGGAGCAGAGCTTCCAGGAGCAG
AGCAGTTGATGGACAAGATGAATATTACAGCCTTGTCATAAATTTCAAAG
AAGCTGTTTTTGGCGTTGAAAAGGAGATTGAGATAACACGTCTTGAGACC
TGTGGCACTTGCCA
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