CN184579

Overview
NameCN184579
Unique NameCN184579
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length664
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_ALCBS (Chaperone protein dnaJ OS=Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.514e-19
Identity = 57/155 (36.77%), Postives = 83/155 (53.55%), Query Frame = 3
Query:  222 DYYSVLGVSRNASKSEIKSAYRKLARSYHPDVN-KEPNAEQHLKEISNAYEVLSDDEKRSLNDKFGEAGLK------GAGMGMGDFSNPF-DLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            DYY VLG +++AS  ++K AYR+LA  YHPD N  +  A    KE   AYEVL+D++KR+  D+FG AG+       GAG G G F + F D+F  +F G                     G D  Y+L ++ ++AV G +++I I   ++C  C
Sbjct:    5 DYYEVLGAAKDASAQDLKKAYRRLAMKYHPDRNPDDKEALAKFKEAKEAYEVLADEQKRAAYDQFGHAGVNGQGGGPGAGAGAGGFGDIFGDIFGDIFGGAGGGGGRRGPSR---------GADLRYTLELSLEQAVRGCDEKIRIPTWDSCDVC 150          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_AGRRK (Chaperone protein dnaJ OS=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.514e-19
Identity = 57/155 (36.77%), Postives = 76/155 (49.03%), Query Frame = 3
Query:  213 ADSDYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNKEPN-AEQHLKEISNAYEVLSDDEKRSLNDKFGEAGLKGAGMGMGDFS----NPFDLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            A +DYY  LGVSR A + E+KSA+RKLA  +HPD N + N AE+  KEI+ AYE L D  KR+  D++G A  +  GMG G F          F  +FE                      G D  Y++ I+ +EA  G   +I +    TC  C
Sbjct:    2 AKADYYETLGVSRTADEKELKSAFRKLAMQFHPDKNPDDNDAERKFKEINEAYETLKDPNKRAAYDRYGHAAFEHGGMGGGGFGGGGFGGGGGFSDIFEDIFGEMMGGGRGRARSSGGRERGADLRYNMEISLEEAFTGKTAQIRVPTSITCDVC 156          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNJB1_HUMAN (DnaJ homolog subfamily B member 1 OS=Homo sapiens GN=DNAJB1 PE=1 SV=4)

HSP 1 Score: 95.9005 bits (237), Expect = 1.977e-19
Identity = 45/77 (58.44%), Postives = 55/77 (71.43%), Query Frame = 3
Query:  222 DYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNKEPNAEQHLKEISNAYEVLSDDEKRSLNDKFGEAGLKGAGMGMG 452
            DYY  LG++R AS  EIK AYR+ A  YHPD NKEP AE+  KEI+ AY+VLSD  KR + D++GE GLKG+G   G
Sbjct:    4 DYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKEPGAEEKFKEIAEAYDVLSDPRKREIFDRYGEEGLKGSGPSGG 80          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNJB1_BOVIN (DnaJ homolog subfamily B member 1 OS=Bos taurus GN=DNAJB1 PE=2 SV=3)

HSP 1 Score: 95.9005 bits (237), Expect = 1.977e-19
Identity = 45/77 (58.44%), Postives = 55/77 (71.43%), Query Frame = 3
Query:  222 DYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNKEPNAEQHLKEISNAYEVLSDDEKRSLNDKFGEAGLKGAGMGMG 452
            DYY  LG++R AS  EIK AYR+ A  YHPD NKEP AE+  KEI+ AY+VLSD  KR + D++GE GLKG+G   G
Sbjct:    4 DYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKEPGAEEKFKEIAEAYDVLSDPRKREIFDRYGEEGLKGSGPSGG 80          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_RICTY (Chaperone protein dnaJ OS=Rickettsia typhi GN=dnaJ PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 1.977e-19
Identity = 55/152 (36.18%), Postives = 75/152 (49.34%), Query Frame = 3
Query:  222 DYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNKEPNAEQHLKEISNAYEVLSDDEKRSLNDKFGEAGL-----KGAGMGMGDFSNPFDLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            DYY VLGVS+ AS+++IK AY KLA+ YHPD     +AE+  KEI+ AY+VL D++KR+  D+FG         +G G   G   +  D+F   F                     + G D  Y L I  +EA  G+EK I  +    C  C
Sbjct:    4 DYYQVLGVSKTASQADIKKAYLKLAKQYHPDTTNAHDAEKKFKEINAAYDVLKDEQKRAAYDRFGHDAFQNQQARGGGNNSGFHHDINDIFGDFFS------DFMGSGRRKQTSSKIRGSDLKYDLTIKLEEAFHGIEKNISFSSEVKCDAC 149          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_RICB8 (Chaperone protein dnaJ OS=Rickettsia bellii (strain OSU 85-389) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 1.977e-19
Identity = 61/160 (38.12%), Postives = 81/160 (50.62%), Query Frame = 3
Query:  222 DYYSVLGVSRNASKSEIKSAYRKLARSYHPD--VNKEPNAEQHLKEISNAYEVLSDDEKRSLNDKFGE-----------AGLKGAGMGMGDFSNPFDLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            DYY +LGVS+ A+ +++K AY KLA+ YHPD     + NAE+  KEI+ AYEVL D++KR+  D+FG            AG +G      D ++ F  F S F G                   V G D  Y+L IN +EA  GVEK I  +    C TC
Sbjct:    4 DYYQILGVSKTANSADLKKAYHKLAKQYHPDNAAAGDTNAEKKFKEINAAYEVLKDEQKRAAYDRFGHDAFQNQQARGGAGSQGGHPFGADINDIFGDFFSDFMG--------GGGRRKPTSSKVRGSDLKYNLTINLEEAFHGVEKNISFSSEVKCDTC 155          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ1_DROME (DnaJ protein homolog 1 OS=Drosophila melanogaster GN=DnaJ-1 PE=1 SV=3)

HSP 1 Score: 95.9005 bits (237), Expect = 1.977e-19
Identity = 45/75 (60.00%), Postives = 53/75 (70.67%), Query Frame = 3
Query:  222 DYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNKEPNAEQHLKEISNAYEVLSDDEKRSLNDKFGEAGLKGAGMG 446
            D+Y +LG+ R AS  EIK AYRKLA  YHPD NK P AE+  KEI+ AYEVLSD +KR + D +GE GLKG   G
Sbjct:    4 DFYKILGLERKASDDEIKKAYRKLALKYHPDKNKSPQAEERFKEIAEAYEVLSDKKKRDIFDNYGEDGLKGGQPG 78          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_THEM4 (Chaperone protein dnaJ OS=Thermosipho melanesiensis (strain BI429 / DSM 12029) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 2.583e-19
Identity = 60/159 (37.74%), Postives = 78/159 (49.06%), Query Frame = 3
Query:  213 ADSDYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNKEPN--AEQHLKEISNAYEVLSDDEKRSLNDKFGEAG-----LKGAGMGMGDFSNPFDLFESLFEGTXXXXXXXXXXXXXXXXXXV--DGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            A  DYY +LGVSRNA++ EI+ AY+KL + +HPD N E    AE+  KEI  AYEVLSD EKR++ DKFG  G       G   G G F + F  F                             G+D   S+ ++F+E   GV+  +E  R E C  C
Sbjct:    2 AKKDYYEILGVSRNATQEEIRQAYKKLIKKWHPDRNYENKKLAEEKFKEIQEAYEVLSDPEKRAMYDKFGYVGDVPPNAGGGFRGFGGFEDIFKDFGDFINNDIFNIFFGDQRTSSRKRTKTPRKGEDINISVDVSFEELFTGVKIPLEYDRYEVCEHC 160          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_STRMK (Chaperone protein dnaJ OS=Stenotrophomonas maltophilia (strain K279a) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 2.583e-19
Identity = 61/153 (39.87%), Postives = 79/153 (51.63%), Query Frame = 3
Query:  222 DYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNK-EPNAEQHLKEISNAYEVLSDDEKRSLNDKFGEA----GLKGAGMGMGDFSNPF-DLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            DYY VLGV+R A+  E+K AYR+ A  +HPD N  +  AE   KE   AYEVLSD  KR + D  G A    G+ G G G  D ++ F D+F ++F G                     G D  Y + ++ +EAV GVE+ IEI  L  CG C
Sbjct:    5 DYYEVLGVARTATDDELKKAYRRCAMKFHPDRNPGDAAAEASFKECKEAYEVLSDGNKRRMYDSHGHAAFEHGMGGGGPGGPDMNDIFGDIFGNIFGGGGGGPRQARR-----------GADIGYVMELDLEEAVRGVERRIEIPTLAECGDC 146          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_RHOBA (Chaperone protein dnaJ OS=Rhodopirellula baltica GN=dnaJ PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 2.583e-19
Identity = 55/147 (37.41%), Postives = 74/147 (50.34%), Query Frame = 3
Query:  225 YYSVLGVSRNASKSEIKSAYRKLARSYHPDVNKEP-NAEQHLKEISNAYEVLSDDEKRSLNDKFGEAGLKGAGMGMGDFSNPFDLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            YY VL V R A+K ++  AYRKLA  YHPD N++  +A    KE + AYEVLSD  KR+  D++G AG++GA    GD  + F+ F  LF G                     G D    + +  +EA  G  K+I   R  +C TC
Sbjct:    7 YYEVLKVERTATKQQVDRAYRKLAIKYHPDSNRDDGSATAKFKEATEAYEVLSDANKRARYDQYGHAGVEGATQQYGDVEDIFEAFGDLFGGGFGDFFGGGSRRGGGRRRVRRGADVRCDVTLTLEEAARGCHKDIVFRRRVSCDTC 153          
The following BLAST results are available for this feature:
BLAST of CN184579 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAJ_ALCBS1.514e-1936.77Chaperone protein dnaJ OS=Alcanivorax borkumensis ... [more]
DNAJ_AGRRK1.514e-1936.77Chaperone protein dnaJ OS=Agrobacterium radiobacte... [more]
DNJB1_HUMAN1.977e-1958.44DnaJ homolog subfamily B member 1 OS=Homo sapiens ... [more]
DNJB1_BOVIN1.977e-1958.44DnaJ homolog subfamily B member 1 OS=Bos taurus GN... [more]
DNAJ_RICTY1.977e-1936.18Chaperone protein dnaJ OS=Rickettsia typhi GN=dnaJ... [more]
DNAJ_RICB81.977e-1938.13Chaperone protein dnaJ OS=Rickettsia bellii (strai... [more]
DNAJ1_DROME1.977e-1960.00DnaJ protein homolog 1 OS=Drosophila melanogaster ... [more]
DNAJ_THEM42.583e-1937.74Chaperone protein dnaJ OS=Thermosipho melanesiensi... [more]
DNAJ_STRMK2.583e-1939.87Chaperone protein dnaJ OS=Stenotrophomonas maltoph... [more]
DNAJ_RHOBA2.583e-1937.41Chaperone protein dnaJ OS=Rhodopirellula baltica G... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0005L18_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0005L18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184579 ID=CN184579; Name=CN184579; organism=Citrus sinensis; type=EST; length=664bp
GAGGGTCCACTTTTCACTTCTTTGACCACAATTGCCCTTATGCCAGTTGG
GGAGGGAAAAGAGGCCTGCTGCAAGAAGACATCGCAAGCAGGTTAAGCTG
TCTGGCTGCTCCAAGTTCAAGCTTTTTTTCACGCGATTCCTTCTCTTTGT
TTTCTTATGCTAGTCCATCTCAGACTTCATACCGTCGTAGGGGAGCACGA
TTGATCGTTAGAGCTGATAGTGACTACTATTCAGTTCTAGGGGTGTCAAG
AAATGCAAGTAAATCTGAAATTAAAAGCGCTTATCGGAAGCTTGCAAGGA
GTTATCACCCGGATGTAAACAAAGAACCTAATGCAGAACAGCATCTCAAG
GAAATTAGCAATGCATATGAGGTTCTGTCAGATGATGAGAAACGTTCTTT
AAATGACAAATTTGGGGAGGCTGGACTTAAAGGTGCTGGTATGGGCATGG
GGGATTTCAGCAATCCTTTCGATTTGTTTGAATCACTATTTGAGGGCACG
GGTGGTATGGGCGGAATGGGGAGCATGGGGAGCAGAGCTTCCAGGAGCAG
AGCAGTTGATGGACAAGATGAATATTACAGCCTTGTCATAAATTTCAAAG
AAGCTGTTTTTGGCGTTGAAAAGGAGATTGAGATAACACGTCTTGAGACC
TGTGGCACTTGCCA
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