CN184579

Overview
NameCN184579
Unique NameCN184579
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length664
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_RICCN (Chaperone protein dnaJ OS=Rickettsia conorii GN=dnaJ PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 3.373e-19
Identity = 55/153 (35.95%), Postives = 77/153 (50.33%), Query Frame = 3
Query:  222 DYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNKEPNAEQHLKEISNAYEVLSDDEKRSLNDKFGEAGL-----KGAGMGMGDFSNPF-DLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            +YY +LGVS+ AS++++K AY KLA+ YHPD     +AE+  KEI+ AY+VL D++KR+  D+ G         +G G   G F     D+F   F                     V G D  Y+L IN +EA  G+EK I  +    C TC
Sbjct:    4 NYYQILGVSKTASQADLKKAYLKLAKQYHPDTTDAKDAEKKFKEINAAYDVLKDEQKRAAYDRLGHDAFQNQQSRGGGGNHGGFHPDINDIFGDFFS----DFMGGSRRSSRPTSAKVRGSDLKYNLTINLEEAFHGIEKNISFSSAVKCDTC 152          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_RICAE (Chaperone protein dnaJ OS=Rickettsia africae (strain ESF-5) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 3.373e-19
Identity = 55/153 (35.95%), Postives = 77/153 (50.33%), Query Frame = 3
Query:  222 DYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNKEPNAEQHLKEISNAYEVLSDDEKRSLNDKFGEAGL-----KGAGMGMGDFSNPF-DLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            +YY +LGVS+ AS++++K AY KLA+ YHPD     +AE+  KEI+ AY+VL D++KR+  D+ G         +G G   G F     D+F   F                     V G D  Y+L IN +EA  G+EK I  +    C TC
Sbjct:    4 NYYQILGVSKTASQADLKKAYLKLAKQYHPDTTDAKDAEKKFKEINAAYDVLKDEQKRAAYDRLGHDAFQNQQSRGGGGNHGGFHPDINDIFGDFFS----DFMGGSRRSSRPTSAKVRGSDLKYNLTINLEEAFHGIEKNISFSSAVKCDTC 152          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_PSEU2 (Chaperone protein dnaJ OS=Pseudomonas syringae pv. syringae (strain B728a) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 3.373e-19
Identity = 60/161 (37.27%), Postives = 81/161 (50.31%), Query Frame = 3
Query:  213 ADSDYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNKEPNAEQHL-KEISNAYEVLSDDEKRSLNDKFGEAGLK---------GAGMGMGDFSNPF-DLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            A  DYY VLGV R +S++++K AYR+LA  +HPD N +  A + L KE + AYEVLSD  KR+  D++G AG+          G G G  +FS+ F D+F   F G                     G D  Y+L +N +EAV G    I +  L  C  C
Sbjct:    2 AKRDYYEVLGVERGSSEADLKKAYRRLAMKHHPDRNPDDKASEELFKEANEAYEVLSDASKRAAYDQYGHAGVDPSMGGGGGFGGGAGGANFSDIFGDVFSDFFGGGRAGGGGGRGGAQR-------GSDLRYTLELNLEEAVRGTNVNIRVPTLVNCKPC 155          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_PSE14 (Chaperone protein dnaJ OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 3.373e-19
Identity = 60/161 (37.27%), Postives = 81/161 (50.31%), Query Frame = 3
Query:  213 ADSDYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNKEPNAEQHL-KEISNAYEVLSDDEKRSLNDKFGEAGLK---------GAGMGMGDFSNPF-DLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            A  DYY VLGV R +S++++K AYR+LA  +HPD N +  A + L KE + AYEVLSD  KR+  D++G AG+          G G G  +FS+ F D+F   F G                     G D  Y+L +N +EAV G    I +  L  C  C
Sbjct:    2 AKRDYYEVLGVERGSSEADLKKAYRRLAMKHHPDRNPDDKASEELFKEANEAYEVLSDASKRAAYDQYGHAGVDPSMGGGGGFGGGAGGANFSDIFGDVFSDFFGGGRGGGGGGRGGAQR-------GSDLRYTLELNLEEAVRGTNVNIRVPTLVNCKPC 155          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_METS4 (Chaperone protein dnaJ OS=Methylobacterium sp. (strain 4-46) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 3.373e-19
Identity = 59/155 (38.06%), Postives = 82/155 (52.90%), Query Frame = 3
Query:  222 DYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNK-EPNAEQHLKEISNAYEVLSDDEKRSLNDKFGEA-------GLKGAGMGMGDFSNPFDLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            DYY VLGV++ A ++E+KSA+RKLA +YHPD N  +  AE   KE++ AY+ LSDD+KR+  D+FG A       G  G G   GDF +  D+F++ F G                     G D  Y+L I+ +EA  G  + I +    TC  C
Sbjct:    5 DYYEVLGVAKTAGEAELKSAFRKLAMAYHPDRNPGDKEAEIKFKEVNEAYQTLSDDQKRAAYDRFGHAAFSQGGPGGPGFGADFGDFMS--DIFDTFF-GDARAGGAGPRGGGGRAGGRERGADLRYNLEISLEEAFTGKTETIRLPTSVTCEVC 156          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_METEP (Chaperone protein dnaJ OS=Methylobacterium extorquens (strain PA1) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 3.373e-19
Identity = 58/153 (37.91%), Postives = 77/153 (50.33%), Query Frame = 3
Query:  222 DYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNK-EPNAEQHLKEISNAYEVLSDDEKRSLNDKFGEAGLKGAGMGMGDFSNPF-----DLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            DYY VLGV++ AS+SE+K A+RKLA  +HPD N  +  AE   KE++ AY+ LSD +KR+  D+FG A     G G   F N F     D+FE+ F                       G D  Y+L I+ +EA  G  + I I     C TC
Sbjct:    5 DYYEVLGVAKTASESELKVAFRKLAMVHHPDRNPGDKEAEIKFKEVNEAYQCLSDGQKRAAYDRFGHAAFSQGGAGGPGFGNEFGDFMSDIFENFFGDGRAAPGGGAGRGRGGAPGRERGSDLRYNLEISLEEAFAGKTETIRIPTSIACETC 157          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_METC4 (Chaperone protein dnaJ OS=Methylobacterium chloromethanicum (strain CM4 / NCIMB 13688) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 3.373e-19
Identity = 58/153 (37.91%), Postives = 77/153 (50.33%), Query Frame = 3
Query:  222 DYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNK-EPNAEQHLKEISNAYEVLSDDEKRSLNDKFGEAGLKGAGMGMGDFSNPF-----DLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            DYY VLGV++ AS+SE+K A+RKLA  +HPD N  +  AE   KE++ AY+ LSD +KR+  D+FG A     G G   F N F     D+FE+ F                       G D  Y+L I+ +EA  G  + I I     C TC
Sbjct:    5 DYYEVLGVAKTASESELKVAFRKLAMVHHPDRNPGDKEAEIKFKEVNEAYQCLSDGQKRAAYDRFGHAAFSQGGAGGPGFGNEFGDFMSDIFENFFGDGRAAPGGGAGRGRGGAPGRERGSDLRYNLEISLEEAFAGKTETIRIPTSIACETC 157          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_HYPNA (Chaperone protein dnaJ OS=Hyphomonas neptunium (strain ATCC 15444) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 3.373e-19
Identity = 55/153 (35.95%), Postives = 73/153 (47.71%), Query Frame = 3
Query:  222 DYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNK-EPNAEQHLKEISNAYEVLSDDEKRSLNDKFGEAGLKGAGMG-----MGDFSNPFDLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            DYY VLGV R   +  +KSAYRKLA  YHPD N  +  AE   KE+  AY +LSD +KR+  D++G    +  GMG      G   NP D+F+ LF                       G D  Y L I  +EA +G ++ I + +   C  C
Sbjct:    5 DYYEVLGVERGVDEKALKSAYRKLAMKYHPDQNAGDTAAEDKFKEVGEAYAILSDPQKRAAYDRYGHGAFENGGMGGGSPFGGQGGNPEDIFQDLFSQVFGAGGFAGGRRRSGPQR---GADLRYDLEITLEEAFYGKDETIHVPQAVACRPC 154          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_AGRT5 (Chaperone protein dnaJ OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=dnaJ PE=2 SV=2)

HSP 1 Score: 95.1301 bits (235), Expect = 3.373e-19
Identity = 58/158 (36.71%), Postives = 82/158 (51.90%), Query Frame = 3
Query:  213 ADSDYYSVLGVSRNASKSEIKSAYRKLARSYHPDVN-KEPNAEQHLKEISNAYEVLSDDEKRSLNDKFGEA-----GLKGAGMGMGDFSNP--FDLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            A +D+Y  LGVS+ A + E+KSA+RKLA  +HPD N  + ++E+  KEI+ AYE L D +KR+  D+FG A     G+ G GMG G F+N    D+FE +F                       G D  Y++ I  +EA  G   +I +    TC  C
Sbjct:    2 AKADFYETLGVSKTADEKELKSAFRKLAMKFHPDKNPDDADSERKFKEINEAYETLKDPQKRAAYDRFGHAAFENGGMGGGGMGGGGFANGGFSDIFEDIF-----GEMMGGGRARRSSGGRERGADLRYNMEITLEEAFAGKTAQIRVPTSITCDVC 154          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_WOLPP (Chaperone protein dnaJ OS=Wolbachia pipientis subsp. Culex pipiens (strain wPip) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 4.405e-19
Identity = 61/151 (40.40%), Postives = 74/151 (49.01%), Query Frame = 3
Query:  222 DYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNK-EPNAEQHLKEISNAYEVLSDDEKRSLNDKFGEAGLKGA---GMGMGDFSNPFDLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            DYY +L VSRNAS  EIK AY+KLA  YHPD N     AE+  KE++ AYEVLSD EKR+  D++G  G  G        GDFS   D+F   F G                   V G D  Y L I  ++A  G++  I       C TC
Sbjct:    5 DYYDLLEVSRNASTDEIKKAYKKLALKYHPDRNPGNKEAEEKFKEVTAAYEVLSDSEKRAGYDRYGHDGASGGFDFSQAGGDFS---DIFNDFFGG--GFGGSTSRSRTKRSTTGVSGADLRYDLKITLEDAFKGIQAPIHYVTNIKCNTC 150          
The following BLAST results are available for this feature:
BLAST of CN184579 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAJ_RICCN3.373e-1935.95Chaperone protein dnaJ OS=Rickettsia conorii GN=dn... [more]
DNAJ_RICAE3.373e-1935.95Chaperone protein dnaJ OS=Rickettsia africae (stra... [more]
DNAJ_PSEU23.373e-1937.27Chaperone protein dnaJ OS=Pseudomonas syringae pv.... [more]
DNAJ_PSE143.373e-1937.27Chaperone protein dnaJ OS=Pseudomonas syringae pv.... [more]
DNAJ_METS43.373e-1938.06Chaperone protein dnaJ OS=Methylobacterium sp. (st... [more]
DNAJ_METEP3.373e-1937.91Chaperone protein dnaJ OS=Methylobacterium extorqu... [more]
DNAJ_METC43.373e-1937.91Chaperone protein dnaJ OS=Methylobacterium chlorom... [more]
DNAJ_HYPNA3.373e-1935.95Chaperone protein dnaJ OS=Hyphomonas neptunium (st... [more]
DNAJ_AGRT53.373e-1936.71Chaperone protein dnaJ OS=Agrobacterium tumefacien... [more]
DNAJ_WOLPP4.405e-1940.40Chaperone protein dnaJ OS=Wolbachia pipientis subs... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0005L18_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0005L18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184579 ID=CN184579; Name=CN184579; organism=Citrus sinensis; type=EST; length=664bp
GAGGGTCCACTTTTCACTTCTTTGACCACAATTGCCCTTATGCCAGTTGG
GGAGGGAAAAGAGGCCTGCTGCAAGAAGACATCGCAAGCAGGTTAAGCTG
TCTGGCTGCTCCAAGTTCAAGCTTTTTTTCACGCGATTCCTTCTCTTTGT
TTTCTTATGCTAGTCCATCTCAGACTTCATACCGTCGTAGGGGAGCACGA
TTGATCGTTAGAGCTGATAGTGACTACTATTCAGTTCTAGGGGTGTCAAG
AAATGCAAGTAAATCTGAAATTAAAAGCGCTTATCGGAAGCTTGCAAGGA
GTTATCACCCGGATGTAAACAAAGAACCTAATGCAGAACAGCATCTCAAG
GAAATTAGCAATGCATATGAGGTTCTGTCAGATGATGAGAAACGTTCTTT
AAATGACAAATTTGGGGAGGCTGGACTTAAAGGTGCTGGTATGGGCATGG
GGGATTTCAGCAATCCTTTCGATTTGTTTGAATCACTATTTGAGGGCACG
GGTGGTATGGGCGGAATGGGGAGCATGGGGAGCAGAGCTTCCAGGAGCAG
AGCAGTTGATGGACAAGATGAATATTACAGCCTTGTCATAAATTTCAAAG
AAGCTGTTTTTGGCGTTGAAAAGGAGATTGAGATAACACGTCTTGAGACC
TGTGGCACTTGCCA
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