CN184579

Overview
NameCN184579
Unique NameCN184579
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length664
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_STAAS (Chaperone protein dnaJ OS=Staphylococcus aureus (strain MSSA476) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 3.044e-28
Identity = 72/164 (43.90%), Postives = 90/164 (54.88%), Query Frame = 3 
Query:  213 ADSDYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNKEPNAEQHLKEISNAYEVLSDDEKRSLNDKFGEAGLKG--------------AGMGMGDFSNPFDLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            A  DYY VLG+S++ASK EIK AYRKL++ YHPD+NKE  A++  KEIS AYEVLSDD KR+  D+FG  G +G              +G G G F    D+F S F G                     G D  Y++ + F+EAVFG  KEI I +  TC TC
Sbjct:    2 AKRDYYEVLGISKDASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDNKRASYDQFGHDGPQGFGGQGFNGSDFGGFSGFGGGGFE---DIFSSFFGG----------GRQRDPNAPQKGDDLQYTMTLTFEEAVFGTTKEISIRKDVTCETC 152
[Close]
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_STAAR (Chaperone protein dnaJ OS=Staphylococcus aureus (strain MRSA252) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 3.044e-28
Identity = 72/164 (43.90%), Postives = 90/164 (54.88%), Query Frame = 3 
Query:  213 ADSDYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNKEPNAEQHLKEISNAYEVLSDDEKRSLNDKFGEAGLKG--------------AGMGMGDFSNPFDLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            A  DYY VLG+S++ASK EIK AYRKL++ YHPD+NKE  A++  KEIS AYEVLSDD KR+  D+FG  G +G              +G G G F    D+F S F G                     G D  Y++ + F+EAVFG  KEI I +  TC TC
Sbjct:    2 AKRDYYEVLGISKDASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDNKRASYDQFGHDGPQGFGGQGFNGSDFGGFSGFGGGGFE---DIFSSFFGG----------GRQRDPNAPQKGDDLQYTMTLTFEEAVFGTTKEISIRKDVTCETC 152
[Close]
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_STAAN (Chaperone protein dnaJ OS=Staphylococcus aureus (strain N315) GN=dnaJ PE=1 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 3.044e-28
Identity = 72/164 (43.90%), Postives = 90/164 (54.88%), Query Frame = 3 
Query:  213 ADSDYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNKEPNAEQHLKEISNAYEVLSDDEKRSLNDKFGEAGLKG--------------AGMGMGDFSNPFDLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            A  DYY VLG+S++ASK EIK AYRKL++ YHPD+NKE  A++  KEIS AYEVLSDD KR+  D+FG  G +G              +G G G F    D+F S F G                     G D  Y++ + F+EAVFG  KEI I +  TC TC
Sbjct:    2 AKRDYYEVLGISKDASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDNKRASYDQFGHDGPQGFGGQGFNGSDFGGFSGFGGGGFE---DIFSSFFGG----------GRQRDPNAPQKGDDLQYTMTLTFEEAVFGTTKEISIRKDVTCETC 152
[Close]
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_STAAM (Chaperone protein dnaJ OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=dnaJ PE=1 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 3.044e-28
Identity = 72/164 (43.90%), Postives = 90/164 (54.88%), Query Frame = 3 
Query:  213 ADSDYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNKEPNAEQHLKEISNAYEVLSDDEKRSLNDKFGEAGLKG--------------AGMGMGDFSNPFDLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            A  DYY VLG+S++ASK EIK AYRKL++ YHPD+NKE  A++  KEIS AYEVLSDD KR+  D+FG  G +G              +G G G F    D+F S F G                     G D  Y++ + F+EAVFG  KEI I +  TC TC
Sbjct:    2 AKRDYYEVLGISKDASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDNKRASYDQFGHDGPQGFGGQGFNGSDFGGFSGFGGGGFE---DIFSSFFGG----------GRQRDPNAPQKGDDLQYTMTLTFEEAVFGTTKEISIRKDVTCETC 152
[Close]
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_STAAE (Chaperone protein dnaJ OS=Staphylococcus aureus (strain Newman) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 3.044e-28
Identity = 72/164 (43.90%), Postives = 90/164 (54.88%), Query Frame = 3 
Query:  213 ADSDYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNKEPNAEQHLKEISNAYEVLSDDEKRSLNDKFGEAGLKG--------------AGMGMGDFSNPFDLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            A  DYY VLG+S++ASK EIK AYRKL++ YHPD+NKE  A++  KEIS AYEVLSDD KR+  D+FG  G +G              +G G G F    D+F S F G                     G D  Y++ + F+EAVFG  KEI I +  TC TC
Sbjct:    2 AKRDYYEVLGISKDASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDNKRASYDQFGHDGPQGFGGQGFNGSDFGGFSGFGGGGFE---DIFSSFFGG----------GRQRDPNAPQKGDDLQYTMTLTFEEAVFGTTKEISIRKDVTCETC 152
[Close]
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_STAAC (Chaperone protein dnaJ OS=Staphylococcus aureus (strain COL) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 3.044e-28
Identity = 72/164 (43.90%), Postives = 90/164 (54.88%), Query Frame = 3 
Query:  213 ADSDYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNKEPNAEQHLKEISNAYEVLSDDEKRSLNDKFGEAGLKG--------------AGMGMGDFSNPFDLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            A  DYY VLG+S++ASK EIK AYRKL++ YHPD+NKE  A++  KEIS AYEVLSDD KR+  D+FG  G +G              +G G G F    D+F S F G                     G D  Y++ + F+EAVFG  KEI I +  TC TC
Sbjct:    2 AKRDYYEVLGISKDASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDNKRASYDQFGHDGPQGFGGQGFNGSDFGGFSGFGGGGFE---DIFSSFFGG----------GRQRDPNAPQKGDDLQYTMTLTFEEAVFGTTKEISIRKDVTCETC 152
[Close]
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_STAAB (Chaperone protein dnaJ OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 3.044e-28
Identity = 72/164 (43.90%), Postives = 90/164 (54.88%), Query Frame = 3 
Query:  213 ADSDYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNKEPNAEQHLKEISNAYEVLSDDEKRSLNDKFGEAGLKG--------------AGMGMGDFSNPFDLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            A  DYY VLG+S++ASK EIK AYRKL++ YHPD+NKE  A++  KEIS AYEVLSDD KR+  D+FG  G +G              +G G G F    D+F S F G                     G D  Y++ + F+EAVFG  KEI I +  TC TC
Sbjct:    2 AKRDYYEVLGISKDASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDNKRASYDQFGHDGPQGFGGQGFNGSDFGGFSGFGGGGFE---DIFSSFFGG----------GRQRDPNASQKGDDLQYTMTLTFEEAVFGTTKEISIRKDVTCETC 152
[Close]
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_STAA9 (Chaperone protein dnaJ OS=Staphylococcus aureus (strain JH9) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 3.044e-28
Identity = 72/164 (43.90%), Postives = 90/164 (54.88%), Query Frame = 3 
Query:  213 ADSDYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNKEPNAEQHLKEISNAYEVLSDDEKRSLNDKFGEAGLKG--------------AGMGMGDFSNPFDLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            A  DYY VLG+S++ASK EIK AYRKL++ YHPD+NKE  A++  KEIS AYEVLSDD KR+  D+FG  G +G              +G G G F    D+F S F G                     G D  Y++ + F+EAVFG  KEI I +  TC TC
Sbjct:    2 AKRDYYEVLGISKDASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDNKRASYDQFGHDGPQGFGGQGFNGSDFGGFSGFGGGGFE---DIFSSFFGG----------GRQRDPNAPQKGDDLQYTMTLTFEEAVFGTTKEISIRKDVTCETC 152
[Close]
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_STAA8 (Chaperone protein dnaJ OS=Staphylococcus aureus (strain NCTC 8325) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 3.044e-28
Identity = 72/164 (43.90%), Postives = 90/164 (54.88%), Query Frame = 3 
Query:  213 ADSDYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNKEPNAEQHLKEISNAYEVLSDDEKRSLNDKFGEAGLKG--------------AGMGMGDFSNPFDLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            A  DYY VLG+S++ASK EIK AYRKL++ YHPD+NKE  A++  KEIS AYEVLSDD KR+  D+FG  G +G              +G G G F    D+F S F G                     G D  Y++ + F+EAVFG  KEI I +  TC TC
Sbjct:    2 AKRDYYEVLGISKDASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDNKRASYDQFGHDGPQGFGGQGFNGSDFGGFSGFGGGGFE---DIFSSFFGG----------GRQRDPNAPQKGDDLQYTMTLTFEEAVFGTTKEISIRKDVTCETC 152
[Close]
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_STAA3 (Chaperone protein dnaJ OS=Staphylococcus aureus (strain USA300) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 3.044e-28
Identity = 72/164 (43.90%), Postives = 90/164 (54.88%), Query Frame = 3 
Query:  213 ADSDYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNKEPNAEQHLKEISNAYEVLSDDEKRSLNDKFGEAGLKG--------------AGMGMGDFSNPFDLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            A  DYY VLG+S++ASK EIK AYRKL++ YHPD+NKE  A++  KEIS AYEVLSDD KR+  D+FG  G +G              +G G G F    D+F S F G                     G D  Y++ + F+EAVFG  KEI I +  TC TC
Sbjct:    2 AKRDYYEVLGISKDASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDNKRASYDQFGHDGPQGFGGQGFNGSDFGGFSGFGGGGFE---DIFSSFFGG----------GRQRDPNAPQKGDDLQYTMTLTFEEAVFGTTKEISIRKDVTCETC 152
The following BLAST results are available for this feature:
BLAST of CN184579 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAJ_STAAS3.044e-2843.90Chaperone protein dnaJ OS=Staphylococcus aureus (s... [more]
DNAJ_STAAR3.044e-2843.90Chaperone protein dnaJ OS=Staphylococcus aureus (s... [more]
DNAJ_STAAN3.044e-2843.90Chaperone protein dnaJ OS=Staphylococcus aureus (s... [more]
DNAJ_STAAM3.044e-2843.90Chaperone protein dnaJ OS=Staphylococcus aureus (s... [more]
DNAJ_STAAE3.044e-2843.90Chaperone protein dnaJ OS=Staphylococcus aureus (s... [more]
DNAJ_STAAC3.044e-2843.90Chaperone protein dnaJ OS=Staphylococcus aureus (s... [more]
DNAJ_STAAB3.044e-2843.90Chaperone protein dnaJ OS=Staphylococcus aureus (s... [more]
DNAJ_STAA93.044e-2843.90Chaperone protein dnaJ OS=Staphylococcus aureus (s... [more]
DNAJ_STAA83.044e-2843.90Chaperone protein dnaJ OS=Staphylococcus aureus (s... [more]
DNAJ_STAA33.044e-2843.90Chaperone protein dnaJ OS=Staphylococcus aureus (s... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0005L18_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0005L18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184579 ID=CN184579; Name=CN184579; organism=Citrus sinensis; type=EST; length=664bp
GAGGGTCCACTTTTCACTTCTTTGACCACAATTGCCCTTATGCCAGTTGG
GGAGGGAAAAGAGGCCTGCTGCAAGAAGACATCGCAAGCAGGTTAAGCTG
TCTGGCTGCTCCAAGTTCAAGCTTTTTTTCACGCGATTCCTTCTCTTTGT
TTTCTTATGCTAGTCCATCTCAGACTTCATACCGTCGTAGGGGAGCACGA
TTGATCGTTAGAGCTGATAGTGACTACTATTCAGTTCTAGGGGTGTCAAG
AAATGCAAGTAAATCTGAAATTAAAAGCGCTTATCGGAAGCTTGCAAGGA
GTTATCACCCGGATGTAAACAAAGAACCTAATGCAGAACAGCATCTCAAG
GAAATTAGCAATGCATATGAGGTTCTGTCAGATGATGAGAAACGTTCTTT
AAATGACAAATTTGGGGAGGCTGGACTTAAAGGTGCTGGTATGGGCATGG
GGGATTTCAGCAATCCTTTCGATTTGTTTGAATCACTATTTGAGGGCACG
GGTGGTATGGGCGGAATGGGGAGCATGGGGAGCAGAGCTTCCAGGAGCAG
AGCAGTTGATGGACAAGATGAATATTACAGCCTTGTCATAAATTTCAAAG
AAGCTGTTTTTGGCGTTGAAAAGGAGATTGAGATAACACGTCTTGAGACC
TGTGGCACTTGCCA
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