CN184579

Overview
NameCN184579
Unique NameCN184579
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length664
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3990 contig Csv1_Contig3990:181..844. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_STAA2 (Chaperone protein dnaJ OS=Staphylococcus aureus (strain JH1) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 3.044e-28
Identity = 72/164 (43.90%), Postives = 90/164 (54.88%), Query Frame = 3
Query:  213 ADSDYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNKEPNAEQHLKEISNAYEVLSDDEKRSLNDKFGEAGLKG--------------AGMGMGDFSNPFDLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            A  DYY VLG+S++ASK EIK AYRKL++ YHPD+NKE  A++  KEIS AYEVLSDD KR+  D+FG  G +G              +G G G F    D+F S F G                     G D  Y++ + F+EAVFG  KEI I +  TC TC
Sbjct:    2 AKRDYYEVLGISKDASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDNKRASYDQFGHDGPQGFGGQGFNGSDFGGFSGFGGGGFE---DIFSSFFGG----------GRQRDPNAPQKGDDLQYTMTLTFEEAVFGTTKEISIRKDVTCETC 152          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_STAA1 (Chaperone protein dnaJ OS=Staphylococcus aureus (strain Mu3 / ATCC 700698) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 3.044e-28
Identity = 72/164 (43.90%), Postives = 90/164 (54.88%), Query Frame = 3
Query:  213 ADSDYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNKEPNAEQHLKEISNAYEVLSDDEKRSLNDKFGEAGLKG--------------AGMGMGDFSNPFDLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            A  DYY VLG+S++ASK EIK AYRKL++ YHPD+NKE  A++  KEIS AYEVLSDD KR+  D+FG  G +G              +G G G F    D+F S F G                     G D  Y++ + F+EAVFG  KEI I +  TC TC
Sbjct:    2 AKRDYYEVLGISKDASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDNKRASYDQFGHDGPQGFGGQGFNGSDFGGFSGFGGGGFE---DIFSSFFGG----------GRQRDPNAPQKGDDLQYTMTLTFEEAVFGTTKEISIRKDVTCETC 152          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_LISMF (Chaperone protein dnaJ OS=Listeria monocytogenes serotype 4b (strain F2365) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 3.044e-28
Identity = 69/157 (43.95%), Postives = 88/157 (56.05%), Query Frame = 3
Query:  213 ADSDYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNKEPNAEQHLKEISNAYEVLSDDEKRSLNDKFGE-------AGLKGAGMGMGDFSNPFDLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            A  DYY VLGVS++AS  EIK AYRKL++ YHPD+NKE  A++  KEIS AYE LSD +KR+  D++G         G  G G   G FS   D+F++ F G                     G D  Y++ + FKEA+FG + EIEI R E C TC
Sbjct:    2 AKRDYYEVLGVSKSASADEIKKAYRKLSKQYHPDINKEAGADEKFKEISEAYEALSDPQKRAQYDQYGHVDPNQGFGGGAGGGFSGGGFSGFEDIFDTFFGGGGRQQDPNAPR---------QGSDLQYTMRLKFKEAIFGKDAEIEIPREENCDTC 149          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_LISMC (Chaperone protein dnaJ OS=Listeria monocytogenes serotype 4b (strain Clip81459) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 3.044e-28
Identity = 69/157 (43.95%), Postives = 88/157 (56.05%), Query Frame = 3
Query:  213 ADSDYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNKEPNAEQHLKEISNAYEVLSDDEKRSLNDKFGE-------AGLKGAGMGMGDFSNPFDLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            A  DYY VLGVS++AS  EIK AYRKL++ YHPD+NKE  A++  KEIS AYE LSD +KR+  D++G         G  G G   G FS   D+F++ F G                     G D  Y++ + FKEA+FG + EIEI R E C TC
Sbjct:    2 AKRDYYEVLGVSKSASADEIKKAYRKLSKQYHPDINKEAGADEKFKEISEAYEALSDPQKRAQYDQYGHVDPNQGFGGGAGGGFSGGGFSGFEDIFDTFFGGGGRQQDPNAPR---------QGSDLQYTMRLKFKEAIFGKDAEIEIPREENCDTC 149          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_PELCD (Chaperone protein dnaJ OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 5.192e-28
Identity = 73/159 (45.91%), Postives = 92/159 (57.86%), Query Frame = 3
Query:  222 DYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNK-EPNAEQHLKEISNAYEVLSDDEKRSLNDKFGEAGLKGAGMGMGDFSN------PF-----DLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            DYY VLGV RNAS++EIK AYRKLA  YHPD N  +  AE   KEIS AY +LSD ++R + D++G AGL G G G G +S+      PF     D+F  +F G                     G D  Y+L INF+EA FG+E +I+I R +TCGTC
Sbjct:    5 DYYEVLGVHRNASETEIKKAYRKLAIKYHPDKNAGDKAAEDKFKEISEAYSILSDTQQRVIYDQYGHAGLNGGGGGGGSYSSGGFGGTPFEDLFGDIFGDIFGGRGSQRSRGRR-----------GDDLRYNLSINFEEAAFGLETKIQIPRHQTCGTC 152          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_DICT6 (Chaperone protein dnaJ OS=Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 5.192e-28
Identity = 69/159 (43.40%), Postives = 89/159 (55.97%), Query Frame = 3
Query:  222 DYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNKEPNAEQHLKEISNAYEVLSDDEKRSLNDKFG-----------EAGLKGAGMGMGDFSNPF-DLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            DYY +LGV RNA++ EIK AYR+L R YHPD+NK+P+A +  KEI+ AYEVLSD +KR+  D+FG           + G +  G   GD    F D+FE+ F  +                    G D  Y + I  +EA FG EKEI +TRLETC TC
Sbjct:    6 DYYEILGVPRNATQDEIKQAYRRLVRQYHPDLNKDPSAHEKFKEINEAYEVLSDPQKRAQYDQFGHVGDFSGYGDFQGGWQPGGFDFGDLGRNFEDIFENFFGDSIFGDLFGRRREREKAPR--KGADLRYDINITLEEAAFGSEKEIYVTRLETCPTC 162          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_ENTFA (Chaperone protein dnaJ OS=Enterococcus faecalis GN=dnaJ PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 6.780e-28
Identity = 66/161 (40.99%), Postives = 89/161 (55.28%), Query Frame = 3
Query:  222 DYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNKEPNAEQHLKEISNAYEVLSDDEKRSLNDKFGEA--------------GLKGAGMGMGDFSNPFDLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            DYY VLG+++ AS  EIK AYRKL++ YHPD+NKE +AE+  KE+S AYEVLSD +K++  D++G A              G  G G     F    D+F+S F G                     G D  Y++ + F+EA+FGVEKEI+  R +TC TC
Sbjct:    6 DYYEVLGLAKGASDDEIKKAYRKLSKKYHPDINKEADAEEKFKEVSEAYEVLSDPQKKAAYDQYGHAGTDPNYGGGAGGFGGFGGGGFSSSGFGGFEDIFDSFFGGGGGRSVDPNAPR--------QGADLQYTIQLKFEEAIFGVEKEIKYNREDTCATC 158          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_LACJO (Chaperone protein dnaJ OS=Lactobacillus johnsonii GN=dnaJ PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 8.855e-28
Identity = 71/169 (42.01%), Postives = 92/169 (54.44%), Query Frame = 3
Query:  213 ADSDYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNKEPNAEQHLKEISNAYEVLSDDEKRSLNDKFGEAGLKGAG------------------MGMGDFSNPF-DLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            A  DYY VLGV +NAS+SEI  AYRKLA+ YHPD+N EP AE+  KE++ AYEVL D +KR+  D+FG+AG+ G G                   G GDF + F D+F S F G                     GQD  Y++ I+F +A+ G + +I  TR E C TC
Sbjct:    2 AQRDYYDVLGVDKNASESEISKAYRKLAKKYHPDLNHEPGAEEKYKEVNEAYEVLHDKQKRAQYDQFGQAGVNGQGGFGGQGFGGFGGQGGYSSQGFGDFGDIFGDIFGSAFGG---------GRSRVDPTAPQKGQDLDYTMTIDFMDAIKGKKTDITYTRSEVCPTC 161          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_BACWK (Chaperone protein dnaJ OS=Bacillus weihenstephanensis (strain KBAB4) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 8.855e-28
Identity = 68/150 (45.33%), Postives = 85/150 (56.67%), Query Frame = 3
Query:  222 DYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNKEPNAEQHLKEISNAYEVLSDDEKRSLNDKFGEAGLKGAGMGMGDFSNPF---DLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            DYY VLG+S+ ASK EIK AYR+LA+ YHPDV+KE NA +  KE+  AYEVLSDD+KR+  D+FG AG      G GDF   F   D+F S F G                     G D  Y + + F+EA+FG E  +EI   + C TC
Sbjct:    5 DYYEVLGLSQGASKDEIKKAYRRLAKKYHPDVSKEENAIEKFKEVQEAYEVLSDDQKRAQYDQFGHAGPNQGFGGGGDFGGGFGFEDIFSSFFGGGGGRRRDPNAPR--------QGADLQYQVTLEFEEAIFGKELNVEIPVEDPCDTC 146          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_EXIS2 (Chaperone protein dnaJ OS=Exiguobacterium sibiricum (strain DSM 17290 / JCM 13490 / 255-15) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 1.511e-27
Identity = 71/147 (48.30%), Postives = 84/147 (57.14%), Query Frame = 3
Query:  222 DYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNKEPNAEQHLKEISNAYEVLSDDEKRSLNDKFGEAGLKGAGMGMGDFSNPFDLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            DYY VLGV+R+AS +EIK AYRKLAR+YHPDVNKE +A+Q  KE+S AYEVLSDD +R+  D+FG       G G G      D+F+  F G                     GQD  Y   I+F EA  GVEK I I   E CGTC
Sbjct:    5 DYYEVLGVARDASAAEIKRAYRKLARTYHPDVNKEADADQKFKELSEAYEVLSDDNQRARYDQFGHQDPSQGGGGFGGAEGFGDIFDMFFGGGRRQDPNAPR----------KGQDLQYVEEIDFMEAFSGVEKVITIPVEEDCGTC 141          
The following BLAST results are available for this feature:
BLAST of CN184579 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAJ_STAA23.044e-2843.90Chaperone protein dnaJ OS=Staphylococcus aureus (s... [more]
DNAJ_STAA13.044e-2843.90Chaperone protein dnaJ OS=Staphylococcus aureus (s... [more]
DNAJ_LISMF3.044e-2843.95Chaperone protein dnaJ OS=Listeria monocytogenes s... [more]
DNAJ_LISMC3.044e-2843.95Chaperone protein dnaJ OS=Listeria monocytogenes s... [more]
DNAJ_PELCD5.192e-2845.91Chaperone protein dnaJ OS=Pelobacter carbinolicus ... [more]
DNAJ_DICT65.192e-2843.40Chaperone protein dnaJ OS=Dictyoglomus thermophilu... [more]
DNAJ_ENTFA6.780e-2840.99Chaperone protein dnaJ OS=Enterococcus faecalis GN... [more]
DNAJ_LACJO8.855e-2842.01Chaperone protein dnaJ OS=Lactobacillus johnsonii ... [more]
DNAJ_BACWK8.855e-2845.33Chaperone protein dnaJ OS=Bacillus weihenstephanen... [more]
DNAJ_EXIS21.511e-2748.30Chaperone protein dnaJ OS=Exiguobacterium sibiricu... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0005L18_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0005L18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184579 ID=CN184579; Name=CN184579; organism=Citrus sinensis; type=EST; length=664bp
GAGGGTCCACTTTTCACTTCTTTGACCACAATTGCCCTTATGCCAGTTGG
GGAGGGAAAAGAGGCCTGCTGCAAGAAGACATCGCAAGCAGGTTAAGCTG
TCTGGCTGCTCCAAGTTCAAGCTTTTTTTCACGCGATTCCTTCTCTTTGT
TTTCTTATGCTAGTCCATCTCAGACTTCATACCGTCGTAGGGGAGCACGA
TTGATCGTTAGAGCTGATAGTGACTACTATTCAGTTCTAGGGGTGTCAAG
AAATGCAAGTAAATCTGAAATTAAAAGCGCTTATCGGAAGCTTGCAAGGA
GTTATCACCCGGATGTAAACAAAGAACCTAATGCAGAACAGCATCTCAAG
GAAATTAGCAATGCATATGAGGTTCTGTCAGATGATGAGAAACGTTCTTT
AAATGACAAATTTGGGGAGGCTGGACTTAAAGGTGCTGGTATGGGCATGG
GGGATTTCAGCAATCCTTTCGATTTGTTTGAATCACTATTTGAGGGCACG
GGTGGTATGGGCGGAATGGGGAGCATGGGGAGCAGAGCTTCCAGGAGCAG
AGCAGTTGATGGACAAGATGAATATTACAGCCTTGTCATAAATTTCAAAG
AAGCTGTTTTTGGCGTTGAAAAGGAGATTGAGATAACACGTCTTGAGACC
TGTGGCACTTGCCA
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