CN184579

Overview
NameCN184579
Unique NameCN184579
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length664
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3990 contig Csv1_Contig3990:181..844. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_STRR6 (Chaperone protein dnaJ OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 4.395e-27
Identity = 65/152 (42.76%), Postives = 85/152 (55.92%), Query Frame = 3
Query:  216 DSDYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNKEPNAEQHLKEISNAYEVLSDDEKRSLNDKFGEAGLK---GAGMGMGDFSNPFDLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            ++++Y  LGVS+NAS  EIK AYRKL++ YHPD+NKEP AE   KE+  AYE LSDD+KR+  D++G AG     G   G G F    D+F S F G                     G D  Y + + F+EA+FG EKE++  R   C TC
Sbjct:    3 NTEFYDRLGVSKNASADEIKKAYRKLSKKYHPDINKEPGAEDKYKEVQEAYETLSDDQKRAAYDQYGAAGANGGFGGFNGAGGFGGFEDIFSSFFGGGGSSRNPNAPR---------QGDDLQYRVNLTFEEAIFGTEKEVKYHREAGCRTC 145          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_BACA2 (Chaperone protein dnaJ OS=Bacillus amyloliquefaciens (strain FZB42) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 5.740e-27
Identity = 68/153 (44.44%), Postives = 87/153 (56.86%), Query Frame = 3
Query:  222 DYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNKEPNAEQHLKEISNAYEVLSDDEKRSLNDKFGEA----GLKGAGMGMGDFS--NPFDLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            DYY VLGVS++ASK EIK AYRKL++ YHPD+NKE  A++  KE+  AYE LSDD+KR+  D+FG      G  G   G GDF      D+F S+F G                     G D  Y++ ++F++A FG E  IEI R E C TC
Sbjct:    5 DYYEVLGVSKSASKDEIKKAYRKLSKKYHPDINKESGADEKFKEVKEAYEALSDDQKRAQYDQFGHTDPNQGFGGGFGGGGDFGGFGFDDIFSSIFGGGTRRRDPNAPR---------QGADLQYTMTLSFEDAAFGKETIIEIPREENCETC 148          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_STRU0 (Chaperone protein dnaJ OS=Streptococcus uberis (strain ATCC BAA-854 / 0140J) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 7.497e-27
Identity = 64/156 (41.03%), Postives = 88/156 (56.41%), Query Frame = 3
Query:  216 DSDYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNKEPNAEQHLKEISNAYEVLSDDEKRSLNDKFGEAGLKG-------AGMGMGDFSNPFDLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            ++++Y  LGVS++AS+ EIK AYRK+++ YHPD+NKEP AEQ  K++  AYE LSD +KRS  D++G AG +G        G   G F    D+F S F G                     G D  Y + + F+EA+FGVEK++   R  TC TC
Sbjct:    3 NTEFYDRLGVSKDASQDEIKKAYRKMSKKYHPDINKEPGAEQKYKDVQEAYETLSDAQKRSAYDQYGAAGAQGGFGGGGFGGFDGGGFGGFEDIFSSFFGGGGGMRNPNAPR---------QGDDLQYRVNLTFEEAIFGVEKDVSYHREATCHTC 149          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_CLOBB (Chaperone protein dnaJ OS=Clostridium botulinum (strain Eklund 17B / Type B) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 7.497e-27
Identity = 70/159 (44.03%), Postives = 88/159 (55.35%), Query Frame = 3
Query:  213 ADSDYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNK-EPNAEQHLKEISNAYEVLSDDEKRSLNDKFGEAGLKGAGMG--------MGDFSNPFDLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            A+ DYY VLG+ + AS  EIK A+RKLA  YHPD NK    AE+  KEI+ AY+VLSD EK+S  D+FG A   G G G        MG F + FD+F      T                  V+G D  Y++ + F+EAVFGVEKEI + R E+C  C
Sbjct:    2 ANKDYYEVLGLQKGASDDEIKKAFRKLAIKYHPDKNKGNTEAEEKFKEINEAYQVLSDPEKKSNYDQFGSADFNGGGFGSGGFGGFDMGGFGDIFDMFTGGGSST------------RRRNGPVNGNDIEYTVTLTFEEAVFGVEKEITVNRSESCEHC 148          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_BACCR (Chaperone protein dnaJ OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 7.497e-27
Identity = 68/153 (44.44%), Postives = 86/153 (56.21%), Query Frame = 3
Query:  222 DYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNKEPNAEQHLKEISNAYEVLSDDEKRSLNDKFGEAGLK---GAGMGMGDFSNPF---DLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            DYY VLG+S+ AS  EIK AYR+LA+ YHPDV+KE NA +  KE+  AYEVLSDD+KR+  D+FG AG     G   G GDF   F   D+F S F G                     G D  Y + ++F+EA+FG E  +EI   + C TC
Sbjct:    5 DYYEVLGLSKGASTDEIKKAYRRLAKKYHPDVSKEENAIEKFKEVQEAYEVLSDDQKRAQYDQFGHAGANQGFGGFGGGGDFGGGFGFEDIFSSFFGGGGGRRRDPNAPR--------QGADLQYQVTLDFEEAIFGKELNVEIPVEDPCDTC 149          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_BACC4 (Chaperone protein dnaJ OS=Bacillus cereus (strain B4264) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 7.497e-27
Identity = 68/153 (44.44%), Postives = 86/153 (56.21%), Query Frame = 3
Query:  222 DYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNKEPNAEQHLKEISNAYEVLSDDEKRSLNDKFGEAGLK---GAGMGMGDFSNPF---DLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            DYY VLG+S+ AS  EIK AYR+LA+ YHPDV+KE NA +  KE+  AYEVLSDD+KR+  D+FG AG     G   G GDF   F   D+F S F G                     G D  Y + ++F+EA+FG E  +EI   + C TC
Sbjct:    5 DYYEVLGLSKGASTDEIKKAYRRLAKKYHPDVSKEENAIEKFKEVQEAYEVLSDDQKRAQYDQFGHAGANQGFGGFGGGGDFGGGFGFEDIFSSFFGGGGGRRRDPNAPR--------QGADLQYQVTLDFEEAIFGKELNVEIPVEDPCDTC 149          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_BACC2 (Chaperone protein dnaJ OS=Bacillus cereus (strain G9842) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 7.497e-27
Identity = 68/153 (44.44%), Postives = 86/153 (56.21%), Query Frame = 3
Query:  222 DYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNKEPNAEQHLKEISNAYEVLSDDEKRSLNDKFGEAGLK---GAGMGMGDFSNPF---DLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            DYY VLG+S+ AS  EIK AYR+LA+ YHPDV+KE NA +  KE+  AYEVLSDD+KR+  D+FG AG     G   G GDF   F   D+F S F G                     G D  Y + ++F+EA+FG E  +EI   + C TC
Sbjct:    5 DYYEVLGLSKGASTDEIKKAYRRLAKKYHPDVSKEENAIEKFKEVQEAYEVLSDDQKRAQYDQFGHAGANQGFGGFGGGGDFGGGFGFEDIFSSFFGGGGGRRRDPNAPR--------QGADLQYQVTLDFEEAIFGKELNVEIPVEDPCDTC 149          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_METMA (Chaperone protein dnaJ OS=Methanosarcina mazei GN=dnaJ PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 9.791e-27
Identity = 67/152 (44.08%), Postives = 82/152 (53.95%), Query Frame = 3
Query:  222 DYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNKEPNAEQHLKEISNAYEVLSDDEKRSLNDKFGEAGLKGAGMGM-----GDFSNPFDLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            DYY +LG+S+++S  +IK  YRKLA  YHPD NKEP AE+  KEIS AY VLSD EKR+  D+FG AG+             DF    D+FE  F G                     G D  Y L + F+EA FGV K+I+I R E C TC
Sbjct:    6 DYYEILGLSKDSSVEDIKKTYRKLALQYHPDRNKEPGAEEKFKEISEAYAVLSDAEKRAQYDRFGHAGIDNQYSAEDIFRGADFGGFGDIFEMFFGGGRRGGPMGPRR----------GSDLQYDLYVTFEEAAFGVRKDIDIPRTERCSTC 147          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_CLOTE (Chaperone protein dnaJ OS=Clostridium tetani GN=dnaJ PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 9.791e-27
Identity = 70/151 (46.36%), Postives = 86/151 (56.95%), Query Frame = 3
Query:  222 DYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNK-EPNAEQHLKEISNAYEVLSDDEKRSLNDKFGEAGLKGAGMGMGDFSNPFDL---FESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            D+Y VLGV + A+ +EIK A+RKLA  YHPD N     AE+  KEI+ AY+VLSD +KR+  D+FG A   G G G   F + FDL   FES F G                     G D  YS+ + F EAVFGVEKE+ IT+ ETC TC
Sbjct:    5 DFYEVLGVEKGANDAEIKKAFRKLALKYHPDKNAGNKEAEERFKEINEAYQVLSDPQKRAQYDQFGTADFNGGGAGFSGFED-FDLGDIFESFFGGGFGGFGGSSRRRNGPQK----GPDVQYSINLTFNEAVFGVEKEVSITKSETCETC 150          
BLAST of CN184579 vs. ExPASy Swiss-Prot
Match: DNAJ_BACSH (Chaperone protein dnaJ OS=Bacillus sphaericus GN=dnaJ PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 9.791e-27
Identity = 70/151 (46.36%), Postives = 87/151 (57.62%), Query Frame = 3
Query:  222 DYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNKEPNAEQHLKEISNAYEVLSDDEKRSLNDKFG----EAGLKGAGMGMGDFSNPFDLFESLFEGTXXXXXXXXXXXXXXXXXXVDGQDEYYSLVINFKEAVFGVEKEIEITRLETCGTC 662
            DYY VLG++    K EIK AYRKL++ YHPD+NKEP A++  KEI+ AYEVLSDD+K++  D+FG     AG  G G G G F    D+F S F G                     G D  Y + I F+EA+FG E EIEI + ETC TC
Sbjct:    5 DYYEVLGLT----KDEIKKAYRKLSKQYHPDLNKEPGADEKFKEIAEAYEVLSDDQKKARYDQFGHEDPNAGF-GGGFGGGGFGGFEDIFSSFFGGGGRRQDPNAPR---------KGDDLQYRMNIKFEEAIFGKETEIEIPKDETCETC 141          
The following BLAST results are available for this feature:
BLAST of CN184579 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAJ_STRR64.395e-2742.76Chaperone protein dnaJ OS=Streptococcus pneumoniae... [more]
DNAJ_BACA25.740e-2744.44Chaperone protein dnaJ OS=Bacillus amyloliquefacie... [more]
DNAJ_STRU07.497e-2741.03Chaperone protein dnaJ OS=Streptococcus uberis (st... [more]
DNAJ_CLOBB7.497e-2744.03Chaperone protein dnaJ OS=Clostridium botulinum (s... [more]
DNAJ_BACCR7.497e-2744.44Chaperone protein dnaJ OS=Bacillus cereus (strain ... [more]
DNAJ_BACC47.497e-2744.44Chaperone protein dnaJ OS=Bacillus cereus (strain ... [more]
DNAJ_BACC27.497e-2744.44Chaperone protein dnaJ OS=Bacillus cereus (strain ... [more]
DNAJ_METMA9.791e-2744.08Chaperone protein dnaJ OS=Methanosarcina mazei GN=... [more]
DNAJ_CLOTE9.791e-2746.36Chaperone protein dnaJ OS=Clostridium tetani GN=dn... [more]
DNAJ_BACSH9.791e-2746.36Chaperone protein dnaJ OS=Bacillus sphaericus GN=d... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS04_0005L18_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0005L18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184579 ID=CN184579; Name=CN184579; organism=Citrus sinensis; type=EST; length=664bp
GAGGGTCCACTTTTCACTTCTTTGACCACAATTGCCCTTATGCCAGTTGG
GGAGGGAAAAGAGGCCTGCTGCAAGAAGACATCGCAAGCAGGTTAAGCTG
TCTGGCTGCTCCAAGTTCAAGCTTTTTTTCACGCGATTCCTTCTCTTTGT
TTTCTTATGCTAGTCCATCTCAGACTTCATACCGTCGTAGGGGAGCACGA
TTGATCGTTAGAGCTGATAGTGACTACTATTCAGTTCTAGGGGTGTCAAG
AAATGCAAGTAAATCTGAAATTAAAAGCGCTTATCGGAAGCTTGCAAGGA
GTTATCACCCGGATGTAAACAAAGAACCTAATGCAGAACAGCATCTCAAG
GAAATTAGCAATGCATATGAGGTTCTGTCAGATGATGAGAAACGTTCTTT
AAATGACAAATTTGGGGAGGCTGGACTTAAAGGTGCTGGTATGGGCATGG
GGGATTTCAGCAATCCTTTCGATTTGTTTGAATCACTATTTGAGGGCACG
GGTGGTATGGGCGGAATGGGGAGCATGGGGAGCAGAGCTTCCAGGAGCAG
AGCAGTTGATGGACAAGATGAATATTACAGCCTTGTCATAAATTTCAAAG
AAGCTGTTTTTGGCGTTGAAAAGGAGATTGAGATAACACGTCTTGAGACC
TGTGGCACTTGCCA
back to top