DC887399
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC887399 vs. ExPASy Swiss-Prot
Match: RAB5A_PIG (Ras-related protein Rab-5A OS=Sus scrofa GN=RAB5A PE=2 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 1.713e-28 Identity = 61/107 (57.01%), Postives = 80/107 (74.77%), Query Frame = -1 Query: 182 AGQERYAALAPLYYRGXXXXXXVYDITSPDSFNKAQXWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRLPR 502 AGQERY +LAP+YYRG VYDIT+ +SF +A+ WVKELQ+ SP+IV+AL GNKADL KR V Q+ YA+ N + F+ETSAKT+ N+N++F IAK+LP+ Sbjct: 77 AGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPK 183
BLAST of DC887399 vs. ExPASy Swiss-Prot
Match: RAB5A_MOUSE (Ras-related protein Rab-5A OS=Mus musculus GN=Rab5a PE=1 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 1.713e-28 Identity = 61/107 (57.01%), Postives = 80/107 (74.77%), Query Frame = -1 Query: 182 AGQERYAALAPLYYRGXXXXXXVYDITSPDSFNKAQXWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRLPR 502 AGQERY +LAP+YYRG VYDIT+ +SF +A+ WVKELQ+ SP+IV+AL GNKADL KR V Q+ YA+ N + F+ETSAKT+ N+N++F IAK+LP+ Sbjct: 77 AGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPK 183
BLAST of DC887399 vs. ExPASy Swiss-Prot
Match: RAB5A_MACFA (Ras-related protein Rab-5A OS=Macaca fascicularis GN=RAB5A PE=2 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 1.713e-28 Identity = 61/107 (57.01%), Postives = 80/107 (74.77%), Query Frame = -1 Query: 182 AGQERYAALAPLYYRGXXXXXXVYDITSPDSFNKAQXWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRLPR 502 AGQERY +LAP+YYRG VYDIT+ +SF +A+ WVKELQ+ SP+IV+AL GNKADL KR V Q+ YA+ N + F+ETSAKT+ N+N++F IAK+LP+ Sbjct: 77 AGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPK 183
BLAST of DC887399 vs. ExPASy Swiss-Prot
Match: RAB5A_HUMAN (Ras-related protein Rab-5A OS=Homo sapiens GN=RAB5A PE=1 SV=2) HSP 1 Score: 125.176 bits (313), Expect = 1.713e-28 Identity = 61/107 (57.01%), Postives = 80/107 (74.77%), Query Frame = -1 Query: 182 AGQERYAALAPLYYRGXXXXXXVYDITSPDSFNKAQXWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRLPR 502 AGQERY +LAP+YYRG VYDIT+ +SF +A+ WVKELQ+ SP+IV+AL GNKADL KR V Q+ YA+ N + F+ETSAKT+ N+N++F IAK+LP+ Sbjct: 77 AGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPK 183
BLAST of DC887399 vs. ExPASy Swiss-Prot
Match: RAB5A_CANFA (Ras-related protein Rab-5A OS=Canis familiaris GN=RAB5A PE=1 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 1.713e-28 Identity = 61/107 (57.01%), Postives = 80/107 (74.77%), Query Frame = -1 Query: 182 AGQERYAALAPLYYRGXXXXXXVYDITSPDSFNKAQXWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRLPR 502 AGQERY +LAP+YYRG VYDIT+ +SF +A+ WVKELQ+ SP+IV+AL GNKADL KR V Q+ YA+ N + F+ETSAKT+ N+N++F IAK+LP+ Sbjct: 77 AGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPK 183
BLAST of DC887399 vs. ExPASy Swiss-Prot
Match: RAB5A_BOVIN (Ras-related protein Rab-5A OS=Bos taurus GN=RAB5A PE=2 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 1.713e-28 Identity = 61/107 (57.01%), Postives = 80/107 (74.77%), Query Frame = -1 Query: 182 AGQERYAALAPLYYRGXXXXXXVYDITSPDSFNKAQXWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRLPR 502 AGQERY +LAP+YYRG VYDIT+ +SF +A+ WVKELQ+ SP+IV+AL GNKADL KR V Q+ YA+ N + F+ETSAKT+ N+N++F IAK+LP+ Sbjct: 77 AGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPK 183
BLAST of DC887399 vs. ExPASy Swiss-Prot
Match: RAB5B_PONAB (Ras-related protein Rab-5B OS=Pongo abelii GN=RAB5B PE=2 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 6.511e-28 Identity = 61/107 (57.01%), Postives = 78/107 (72.90%), Query Frame = -1 Query: 182 AGQERYAALAPLYYRGXXXXXXVYDITSPDSFNKAQXWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRLPR 502 AGQERY +LAP+YYRG VYDIT+ ++F +A+ WVKELQ+ SP IV+AL GNKADL KR V ++ YA+ N + F+ETSAKTA N+N LF IAK+LP+ Sbjct: 77 AGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNKADLANKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKLPK 183
BLAST of DC887399 vs. ExPASy Swiss-Prot
Match: RAB5B_MOUSE (Ras-related protein Rab-5B OS=Mus musculus GN=Rab5b PE=1 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 6.511e-28 Identity = 61/107 (57.01%), Postives = 78/107 (72.90%), Query Frame = -1 Query: 182 AGQERYAALAPLYYRGXXXXXXVYDITSPDSFNKAQXWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRLPR 502 AGQERY +LAP+YYRG VYDIT+ ++F +A+ WVKELQ+ SP IV+AL GNKADL KR V ++ YA+ N + F+ETSAKTA N+N LF IAK+LP+ Sbjct: 77 AGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNKADLANKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKLPK 183
BLAST of DC887399 vs. ExPASy Swiss-Prot
Match: RAB5B_HUMAN (Ras-related protein Rab-5B OS=Homo sapiens GN=RAB5B PE=1 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 6.511e-28 Identity = 61/107 (57.01%), Postives = 78/107 (72.90%), Query Frame = -1 Query: 182 AGQERYAALAPLYYRGXXXXXXVYDITSPDSFNKAQXWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRLPR 502 AGQERY +LAP+YYRG VYDIT+ ++F +A+ WVKELQ+ SP IV+AL GNKADL KR V ++ YA+ N + F+ETSAKTA N+N LF IAK+LP+ Sbjct: 77 AGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNKADLANKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKLPK 183
BLAST of DC887399 vs. ExPASy Swiss-Prot
Match: RAB5B_CHICK (Ras-related protein Rab-5B OS=Gallus gallus GN=RAB5B PE=2 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 6.511e-28 Identity = 61/107 (57.01%), Postives = 78/107 (72.90%), Query Frame = -1 Query: 182 AGQERYAALAPLYYRGXXXXXXVYDITSPDSFNKAQXWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRLPR 502 AGQERY +LAP+YYRG VYDIT+ ++F +A+ WVKELQ+ SP IV+AL GNKADL KR V ++ YA+ N + F+ETSAKTA N+N LF IAK+LP+ Sbjct: 77 AGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNKADLASKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKLPK 183 The following BLAST results are available for this feature:
BLAST of DC887399 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 318
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Sequences
The
following sequences are available for this feature:
EST sequence >DC887399 ID=DC887399; Name=DC887399; organism=Citrus sinensis; type=EST; length=502bpback to top |