DC887399
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC887399 vs. ExPASy Swiss-Prot
Match: RAB2B_MOUSE (Ras-related protein Rab-2B OS=Mus musculus GN=Rab2b PE=2 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 1.231e-18 Identity = 42/107 (39.25%), Postives = 70/107 (65.42%), Query Frame = -1 Query: 182 AGQERYAALAPLYYRGXXXXXXVYDITSPDSFNKAQXWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRLPR 502 AGQE + ++ YYRG VYDIT ++FN W+++ ++H S ++V+ L+GNK+DL +R+V ++G +A ++G+ F+ETSAKTA N+ + + AK + R Sbjct: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNKSDLESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAYINTAKEIYR 169
BLAST of DC887399 vs. ExPASy Swiss-Prot
Match: RAB25_MOUSE (Ras-related protein Rab-25 OS=Mus musculus GN=Rab25 PE=1 SV=2) HSP 1 Score: 92.4337 bits (228), Expect = 1.231e-18 Identity = 43/105 (40.95%), Postives = 63/105 (60.00%), Query Frame = -1 Query: 188 AGQERYAALAPLYYRGXXXXXXVYDITSPDSFNKAQXWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRL 502 AG ERY A+ YYRG V+D+T ++ + W+KEL H IV+ LVGNK+DL + REVP ++ +AE NG+ F+ETSA + N+ F+ + K + Sbjct: 69 AGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLSQAREVPTEEACMFAENNGLLFLETSALDSTNVELAFQTVLKEI 173
BLAST of DC887399 vs. ExPASy Swiss-Prot
Match: RAB18_RAT (Ras-related protein Rab-18 OS=Rattus norvegicus GN=Rab18 PE=2 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 1.231e-18 Identity = 49/106 (46.23%), Postives = 66/106 (62.26%), Query Frame = -1 Query: 188 AGQERYAALAPLYYRGXXXXXXVYDITSPDSFNKAQXWVKELQKHGSP-DIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRL 502 AGQER+ L P YYRG VYD+T D+F K W+ EL+ + + DIV LVGNK D E REV +G+++A K+ M FIE SAKT D + FEE+ +++ Sbjct: 65 AGQERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELETYCTRNDIVNMLVGNKID-KENREVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKI 169
BLAST of DC887399 vs. ExPASy Swiss-Prot
Match: RAB18_PONAB (Ras-related protein Rab-18 OS=Pongo abelii GN=RAB18 PE=2 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 1.231e-18 Identity = 49/106 (46.23%), Postives = 66/106 (62.26%), Query Frame = -1 Query: 188 AGQERYAALAPLYYRGXXXXXXVYDITSPDSFNKAQXWVKELQKHGSP-DIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRL 502 AGQER+ L P YYRG VYD+T D+F K W+ EL+ + + DIV LVGNK D E REV +G+++A K+ M FIE SAKT D + FEE+ +++ Sbjct: 65 AGQERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELETYCTRNDIVNMLVGNKID-KENREVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKI 169
BLAST of DC887399 vs. ExPASy Swiss-Prot
Match: RAB18_MOUSE (Ras-related protein Rab-18 OS=Mus musculus GN=Rab18 PE=2 SV=2) HSP 1 Score: 92.4337 bits (228), Expect = 1.231e-18 Identity = 49/106 (46.23%), Postives = 66/106 (62.26%), Query Frame = -1 Query: 188 AGQERYAALAPLYYRGXXXXXXVYDITSPDSFNKAQXWVKELQKHGSP-DIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRL 502 AGQER+ L P YYRG VYD+T D+F K W+ EL+ + + DIV LVGNK D E REV +G+++A K+ M FIE SAKT D + FEE+ +++ Sbjct: 65 AGQERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELETYCTRNDIVNMLVGNKID-KENREVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKI 169
BLAST of DC887399 vs. ExPASy Swiss-Prot
Match: RAB18_HUMAN (Ras-related protein Rab-18 OS=Homo sapiens GN=RAB18 PE=1 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 1.231e-18 Identity = 49/106 (46.23%), Postives = 66/106 (62.26%), Query Frame = -1 Query: 188 AGQERYAALAPLYYRGXXXXXXVYDITSPDSFNKAQXWVKELQKHGSP-DIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRL 502 AGQER+ L P YYRG VYD+T D+F K W+ EL+ + + DIV LVGNK D E REV +G+++A K+ M FIE SAKT D + FEE+ +++ Sbjct: 65 AGQERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELETYCTRNDIVNMLVGNKID-KENREVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKI 169
BLAST of DC887399 vs. ExPASy Swiss-Prot
Match: RAB18_BOVIN (Ras-related protein Rab-18 OS=Bos taurus GN=RAB18 PE=2 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 1.231e-18 Identity = 49/106 (46.23%), Postives = 66/106 (62.26%), Query Frame = -1 Query: 188 AGQERYAALAPLYYRGXXXXXXVYDITSPDSFNKAQXWVKELQKHGSP-DIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRL 502 AGQER+ L P YYRG VYD+T D+F K W+ EL+ + + DIV LVGNK D E REV +G+++A K+ M FIE SAKT D + FEE+ +++ Sbjct: 65 AGQERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELETYCTRNDIVNMLVGNKID-KENREVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKI 169
BLAST of DC887399 vs. ExPASy Swiss-Prot
Match: YPT3_SCHPO (GTP-binding protein ypt3 OS=Schizosaccharomyces pombe GN=ypt3 PE=1 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 1.607e-18 Identity = 46/107 (42.99%), Postives = 63/107 (58.88%), Query Frame = -1 Query: 182 AGQERYAALAPLYYRGXXXXXXVYDITSPDSFNKAQXWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRLPR 502 AGQERY A+ YYRG VYDIT SF+ W+KEL++H +IV+ LVGNK DL R V ++ +A +N + FIETSA A N+ + F+ + + R Sbjct: 67 AGQERYRAITSAYYRGAVGALIVYDITKQSSFDNVGRWLKELREHADSNIVIMLVGNKTDLLHLRAVSTEEAQAFAAENNLSFIETSAMDASNVEEAFQTVLTEIFR 173
BLAST of DC887399 vs. ExPASy Swiss-Prot
Match: RAB6B_CAEEL (Ras-related protein Rab-6.2 OS=Caenorhabditis elegans GN=rab-6.2 PE=2 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 2.099e-18 Identity = 45/106 (42.45%), Postives = 65/106 (61.32%), Query Frame = -1 Query: 185 AGQERYAALAPLYYRGXXXXXXVYDITSPDSFNKAQXWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRLP 502 AGQER+ +L P Y R VYDIT+ +SF++ W+ +++ D+++ LVGNK DL +KR+V +G A++ + FIETSAK N+ QLF IA LP Sbjct: 67 AGQERFRSLIPSYIRDSTVAVVVYDITNSNSFHQTSKWIDDVRTERGSDVIIMLVGNKTDLSDKRQVTTDEGERKAKELNVMFIETSAKAGYNVKQLFRRIAGALP 172
BLAST of DC887399 vs. ExPASy Swiss-Prot
Match: RB11B_TOBAC (Ras-related protein Rab11B OS=Nicotiana tabacum GN=RAB11B PE=2 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 3.581e-18 Identity = 46/101 (45.54%), Postives = 60/101 (59.41%), Query Frame = -1 Query: 200 AGQERYAALAPLYYRGXXXXXXVYDITSPDSFNKAQXWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEI 502 AGQERY A+ YYRG VYDIT +F + W+KEL+ H +IV+ LVGNKADL R V +D +AE+ FF+ETSA + N+ F E+ Sbjct: 71 AGQERYRAITSAYYRGAVGALVVYDITRHVTFENVERWLKELRDHTDQNIVIMLVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALESLNVENAFTEV 171 The following BLAST results are available for this feature:
BLAST of DC887399 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 318
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Sequences
The
following sequences are available for this feature:
EST sequence >DC887399 ID=DC887399; Name=DC887399; organism=Citrus sinensis; type=EST; length=502bpback to top |