DC887399
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC887399 vs. ExPASy Swiss-Prot
Match: RAB8B_HUMAN (Ras-related protein Rab-8B OS=Homo sapiens GN=RAB8B PE=1 SV=2) HSP 1 Score: 87.0409 bits (214), Expect = 5.171e-17 Identity = 39/103 (37.86%), Postives = 66/103 (64.08%), Query Frame = -1 Query: 194 AGQERYAALAPLYYRGXXXXXXVYDITSPDSFNKAQXWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAK 502 AGQER+ + YYRG VYDIT+ SF+ + W++ +++H S D+ ++GNK D+++KR+V + G + A G+ F+ETSAK++ N+ + F +A+ Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSANVEEAFFTLAR 167
BLAST of DC887399 vs. ExPASy Swiss-Prot
Match: RAB2B_MAIZE (Ras-related protein Rab-2-B OS=Zea mays GN=RAB2B PE=2 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 5.171e-17 Identity = 39/102 (38.24%), Postives = 66/102 (64.71%), Query Frame = -1 Query: 197 AGQERYAALAPLYYRGXXXXXXVYDITSPDSFNKAQXWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIA 502 AGQE + ++ YYRG VYDIT ++FN W+++ ++H + ++ + LVGNK DL +R V ++G ++A+++G+ F+E SAKTA N+ + F + A Sbjct: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLVGNKCDLSHRRAVSYEEGEQFAKEHGLIFMEASAKTAQNVEEAFVKTA 164
BLAST of DC887399 vs. ExPASy Swiss-Prot
Match: RAB2A_MAIZE (Ras-related protein Rab-2-A OS=Zea mays GN=RAB2A PE=2 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 5.171e-17 Identity = 39/102 (38.24%), Postives = 66/102 (64.71%), Query Frame = -1 Query: 197 AGQERYAALAPLYYRGXXXXXXVYDITSPDSFNKAQXWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIA 502 AGQE + ++ YYRG VYDIT ++FN W+++ ++H + ++ + LVGNK DL +R V ++G ++A+++G+ F+E SAKTA N+ + F + A Sbjct: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLVGNKCDLSHRRAVSYEEGEQFAKEHGLIFMEASAKTAQNVEEAFVKTA 164
BLAST of DC887399 vs. ExPASy Swiss-Prot
Match: RAB19_XENTR (Ras-related protein Rab-19 OS=Xenopus tropicalis GN=rab19 PE=2 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 5.171e-17 Identity = 42/106 (39.62%), Postives = 66/106 (62.26%), Query Frame = -1 Query: 188 AGQERYAALAPLYYRGXXXXXXVYDITSPDSFNKAQXWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMF-FIETSAKTADNINQLFEEIAKRL 502 AGQER+ + YYR YDIT SF W+ E +K+G+ +++M L+GNK+DL EKR++ ++ AEK+G+ +ETSAK + N++++F +AK L Sbjct: 72 AGQERFRTITQSYYRSAHGAIIAYDITRRQSFESVPHWIYEAEKYGAANLMMMLIGNKSDLAEKRQILFEEACTLAEKHGLLAVLETSAKESHNVDEVFLLMAKEL 177
BLAST of DC887399 vs. ExPASy Swiss-Prot
Match: YPT3_NICPL (Ras-related protein YPT3 OS=Nicotiana plumbaginifolia GN=YPT3 PE=2 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 6.753e-17 Identity = 43/107 (40.19%), Postives = 61/107 (57.01%), Query Frame = -1 Query: 182 AGQERYAALAPLYYRGXXXXXXVYDITSPDSFNKAQXWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRLPR 502 AGQERY A+ YYRG VYD+T ++ W+KEL+ H P+IV+ L+GNK+DL V + AE+ G++F+ETSA A N+ F E ++ R Sbjct: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHVTYENVTRWLKELRDHTDPNIVVMLIGNKSDLRHLVAVSTDEAKGLAEREGLYFMETSALEATNVENAFTEALTQIYR 176
BLAST of DC887399 vs. ExPASy Swiss-Prot
Match: YPT1_NEUCR (GTP-binding protein ypt1 OS=Neurospora crassa GN=ypt-1 PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 6.753e-17 Identity = 41/105 (39.05%), Postives = 65/105 (61.90%), Query Frame = -1 Query: 188 AGQERYAALAPLYYRGXXXXXXVYDITSPDSFNKAQXWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRL 502 AGQER+ + YYRG VYD+T DSFN + W++E+ ++ + + LVGNK+D+ +K+ V E+A+ G+ F+ETSAK A N+ Q F +A+++ Sbjct: 65 AGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEGVNKLLVGNKSDMTDKKVVEYTVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQI 169
BLAST of DC887399 vs. ExPASy Swiss-Prot
Match: RYH1_SCHPO (GTP-binding protein ryh1 OS=Schizosaccharomyces pombe GN=ryh1 PE=1 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 6.753e-17 Identity = 42/106 (39.62%), Postives = 67/106 (63.21%), Query Frame = -1 Query: 185 AGQERYAALAPLYYRGXXXXXXVYDITSPDSFNKAQXWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRLP 502 AGQER+ +L P Y R VYDIT+ +SF + W+++++ D+++ LVGNK DL +KR+V ++G + A++ + +ETSAK N+ LF +IA+ LP Sbjct: 68 AGQERFRSLIPSYIRDSSVAIIVYDITNHNSFVNTEKWIEDVRAERGDDVIIVLVGNKTDLADKRQVTQEEGEKKAKELKIMHMETSAKAGHNVKLLFRKIAQMLP 173
BLAST of DC887399 vs. ExPASy Swiss-Prot
Match: RAB4B_DANRE (Ras-related protein Rab-4B OS=Danio rerio GN=rab4b PE=2 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 6.753e-17 Identity = 42/106 (39.62%), Postives = 65/106 (61.32%), Query Frame = -1 Query: 185 AGQERYAALAPLYYRGXXXXXXVYDITSPDSFNKAQXWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRLP 502 AGQER+ ++ YYRG VYDITS +++N W+ + + SP+IV+ L GNK DL REV + +A++N + F+ETSA T +N+ + F + A+ +P Sbjct: 65 AGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARTLASPNIVIILCGNKKDLDADREVTFLEASRFAQENELMFLETSALTGENVEEAFLKCARSIP 170
BLAST of DC887399 vs. ExPASy Swiss-Prot
Match: RAB37_HUMAN (Ras-related protein Rab-37 OS=Homo sapiens GN=RAB37 PE=1 SV=3) HSP 1 Score: 86.6557 bits (213), Expect = 6.753e-17 Identity = 42/105 (40.00%), Postives = 65/105 (61.90%), Query Frame = -1 Query: 188 AGQERYAALAPLYYRGXXXXXXVYDITSPDSFNKAQXWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRL 502 AGQER+ ++ YYR +YDIT+ SF+ + W+ E+ ++ D+V+ L+GNKAD+ +R + ++DG A + G+ F+ETSAKT N+ F IAK L Sbjct: 87 AGQERFRSVTHAYYRDAQALLLLYDITNKSSFDNIRAWLTEIHEYAQRDVVIMLLGNKADMSSERVIRSEDGETLAREYGVPFLETSAKTGMNVELAFLAIAKEL 191
BLAST of DC887399 vs. ExPASy Swiss-Prot
Match: RAB19_RAT (Ras-related protein Rab-19 OS=Rattus norvegicus GN=Rab19 PE=2 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 6.753e-17 Identity = 43/106 (40.57%), Postives = 65/106 (61.32%), Query Frame = -1 Query: 188 AGQERYAALAPLYYRGXXXXXXVYDITSPDSFNKAQXWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMF-FIETSAKTADNINQLFEEIAKRL 502 AGQER+ + YYR YD+T +F W+ E++K+G+ ++V+ L+GNK+DL EKR V +D AEK G+ +ETSAK + NI+++F +AK L Sbjct: 74 AGQERFRTITQSYYRSAHAAIIAYDLTRRSTFESVPHWIHEIEKYGAANLVIMLIGNKSDLWEKRHVLFEDACTLAEKYGLLAVLETSAKESRNIDEVFVLMAKEL 179 The following BLAST results are available for this feature:
BLAST of DC887399 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 318
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Sequences
The
following sequences are available for this feature:
EST sequence >DC887399 ID=DC887399; Name=DC887399; organism=Citrus sinensis; type=EST; length=502bpback to top |