DC887399
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC887399 vs. ExPASy Swiss-Prot
Match: RAB31_RAT (Ras-related protein Rab-31 OS=Rattus norvegicus GN=Rab31 PE=2 SV=2) HSP 1 Score: 119.398 bits (298), Expect = 9.401e-27 Identity = 58/106 (54.72%), Postives = 76/106 (71.70%), Query Frame = -1 Query: 185 AGQERYAALAPLYYRGXXXXXXVYDITSPDSFNKAQXWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRLP 502 AGQER+ +LAP+YYRG VYDIT DSF+ + WVKEL++HG +IVMA+ GNK DL + REVP +D EYAE G +ETSAK A NI +LF+ I++++P Sbjct: 62 AGQERFHSLAPMYYRGSAAAVIVYDITKQDSFHTLKKWVKELKEHGPENIVMAIAGNKCDLSDIREVPLKDAKEYAESIGALVVETSAKNAINIEELFQGISRQIP 167
BLAST of DC887399 vs. ExPASy Swiss-Prot
Match: RAB31_MOUSE (Ras-related protein Rab-31 OS=Mus musculus GN=Rab31 PE=1 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 9.401e-27 Identity = 58/106 (54.72%), Postives = 76/106 (71.70%), Query Frame = -1 Query: 185 AGQERYAALAPLYYRGXXXXXXVYDITSPDSFNKAQXWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRLP 502 AGQER+ +LAP+YYRG VYDIT DSF+ + WVKEL++HG +IVMA+ GNK DL + REVP +D EYAE G +ETSAK A NI +LF+ I++++P Sbjct: 62 AGQERFHSLAPMYYRGSAAAVIVYDITKQDSFHTLKKWVKELKEHGPENIVMAIAGNKCDLSDIREVPLKDAKEYAESIGAIVVETSAKNAINIEELFQGISRQIP 167
BLAST of DC887399 vs. ExPASy Swiss-Prot
Match: RAB31_HUMAN (Ras-related protein Rab-31 OS=Homo sapiens GN=RAB31 PE=1 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 2.094e-26 Identity = 58/106 (54.72%), Postives = 75/106 (70.75%), Query Frame = -1 Query: 185 AGQERYAALAPLYYRGXXXXXXVYDITSPDSFNKAQXWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRLP 502 AGQER+ +LAP+YYRG VYDIT DSF + WVKEL++HG +IVMA+ GNK DL + REVP +D EYAE G +ETSAK A NI +LF+ I++++P Sbjct: 62 AGQERFHSLAPMYYRGSAAAVIVYDITKQDSFYTLKKWVKELKEHGPENIVMAIAGNKCDLSDIREVPLKDAKEYAESIGAIVVETSAKNAINIEELFQGISRQIP 167
BLAST of DC887399 vs. ExPASy Swiss-Prot
Match: RB22A_HUMAN (Ras-related protein Rab-22A OS=Homo sapiens GN=RAB22A PE=1 SV=2) HSP 1 Score: 117.857 bits (294), Expect = 2.735e-26 Identity = 57/106 (53.77%), Postives = 77/106 (72.64%), Query Frame = -1 Query: 185 AGQERYAALAPLYYRGXXXXXXVYDITSPDSFNKAQXWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRLP 502 AGQER+ ALAP+YYRG VYDIT ++F+ + WVKEL++HG P+IV+A+ GNK DL + REV +D +YA+ F+ETSAK A NIN+LF EI++R+P Sbjct: 62 AGQERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDLIDVREVMERDAKDYADSIHAIFVETSAKNAININELFIEISRRIP 167
BLAST of DC887399 vs. ExPASy Swiss-Prot
Match: RB22A_MOUSE (Ras-related protein Rab-22A OS=Mus musculus GN=Rab22a PE=1 SV=2) HSP 1 Score: 116.701 bits (291), Expect = 6.094e-26 Identity = 56/106 (52.83%), Postives = 76/106 (71.70%), Query Frame = -1 Query: 185 AGQERYAALAPLYYRGXXXXXXVYDITSPDSFNKAQXWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRLP 502 AGQER+ ALAP+YYRG VYDIT ++F+ + WV+EL++HG P IV+A+ GNK DL + REV +D +YA+ F+ETSAK A NIN+LF EI++R+P Sbjct: 62 AGQERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVRELRQHGPPSIVVAIAGNKCDLTDVREVMERDAKDYADSIHAIFVETSAKNAININELFIEISRRIP 167
BLAST of DC887399 vs. ExPASy Swiss-Prot
Match: RB22A_CANFA (Ras-related protein Rab-22A OS=Canis familiaris GN=RAB22A PE=1 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 1.358e-25 Identity = 56/106 (52.83%), Postives = 76/106 (71.70%), Query Frame = -1 Query: 185 AGQERYAALAPLYYRGXXXXXXVYDITSPDSFNKAQXWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRLP 502 AGQE + ALAP+YYRG VYDIT ++F+ + WVKEL++HG P+IV+A+ GNK DL + REV +D +YA+ F+ETSAK A NIN+LF EI++R+P Sbjct: 62 AGQEAFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDLIDVREVMERDAKDYADSIHAIFVETSAKNAININELFIEISRRIP 167
BLAST of DC887399 vs. ExPASy Swiss-Prot
Match: VPS21_YEAST (Vacuolar protein sorting-associated protein 21 OS=Saccharomyces cerevisiae GN=VPS21 PE=1 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 2.560e-24 Identity = 54/109 (49.54%), Postives = 77/109 (70.64%), Query Frame = -1 Query: 185 AGQERYAALAPLYYRGXXXXXXVYDITSPDSFNKAQXWVKELQKHGSPDIVMALVGNKADLHE---KREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRLP 502 AGQER+A+LAP+YYR VYD+T P SF KA+ WVKEL + S DI++ALVGNK D+ + +R+V ++G + AE+ G+ F ETSAKT +N+N +F I +++P Sbjct: 64 AGQERFASLAPMYYRNAQAALVVYDVTKPQSFIKARHWVKELHEQASKDIIIALVGNKIDMLQEGGERKVAREEGEKLAEEKGLLFFETSAKTGENVNDVFLGIGEKIP 172
BLAST of DC887399 vs. ExPASy Swiss-Prot
Match: YPT5_SCHPO (GTP-binding protein ypt5 OS=Schizosaccharomyces pombe GN=ypt5 PE=1 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 9.729e-24 Identity = 57/107 (53.27%), Postives = 70/107 (65.42%), Query Frame = -1 Query: 185 AGQERYAALAPLYYRGXXXXXXVYDITSPDSFNKAQXWVKELQKHGSPDIVMALVGNKADL-HEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRLP 502 AGQERY +LAP+YYR VYDIT S KA+ W+KELQ+ IV+AL GNK DL E+R V D YA + + F ETSAKTA+N+N+LF IAK+LP Sbjct: 72 AGQERYKSLAPMYYRNANCAIVVYDITQAASLEKAKSWIKELQRQAPEGIVIALAGNKLDLAQERRAVEKADAEAYAAEANLLFFETSAKTAENVNELFTAIAKKLP 178
BLAST of DC887399 vs. ExPASy Swiss-Prot
Match: RAB5B_DICDI (Putative ras-related protein Rab-5B OS=Dictyostelium discoideum GN=rab5B PE=5 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 2.649e-21 Identity = 53/106 (50.00%), Postives = 67/106 (63.21%), Query Frame = -1 Query: 188 AGQERYAALAPLYYRGXXXXXXVYDITSPDSFNKAQXWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEY-AEKNGMFFIETSAKTADNINQLFEEIAKRL 502 AGQERY +L P+YYRG VYDIT ++F + WV ELQKH SP++++AL GNK DL REV + Y +E F ETSA + NIN+LF EI +RL Sbjct: 105 AGQERYRSLTPMYYRGAAAAVVVYDITKKNTFETLKRWVSELQKHASPNLILALAGNKVDL-PNREVQVDEVNRYISELGNAIFFETSAASGQNINELFTEICRRL 209
BLAST of DC887399 vs. ExPASy Swiss-Prot
Match: RAB17_MOUSE (Ras-related protein Rab-17 OS=Mus musculus GN=Rab17 PE=2 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 2.649e-21 Identity = 50/106 (47.17%), Postives = 73/106 (68.87%), Query Frame = -1 Query: 188 AGQERYAALAPLYYRGXXXXXXVYDITSPDSFNKAQXWVKELQKHGSP-DIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRL 502 AGQE+Y ++ LY+RG VYDIT DSF+KAQ W+++L+K P ++V+ LVGNK DL E+REV Q+G E+AE + F+ETSAK ++++F +A+ L Sbjct: 75 AGQEKYQSVCHLYFRGANAALLVYDITRKDSFHKAQQWLEDLEKEFQPGEVVVMLVGNKTDLGEEREVTFQEGKEFAESKSLLFMETSAKLNYQVSEIFNTVAQEL 180 The following BLAST results are available for this feature:
BLAST of DC887399 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 318
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Sequences
The
following sequences are available for this feature:
EST sequence >DC887399 ID=DC887399; Name=DC887399; organism=Citrus sinensis; type=EST; length=502bpback to top |