DC887399
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC887399 vs. ExPASy Swiss-Prot
Match: RB43L_HUMAN (Putative Rab-43-like protein ENSP00000330714 OS=Homo sapiens PE=5 SV=3) HSP 1 Score: 75.485 bits (184), Expect = 1.557e-13 Identity = 40/106 (37.74%), Postives = 57/106 (53.77%), Query Frame = -1 Query: 188 AGQERYAALAPLYYRGXXXXXXVYDITSPDSFNKAQXWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMF-FIETSAKTADNINQLFEEIAKRL 502 AGQER+ + YYR YDIT SF W+++++K+ +IV L+GNK+DL E REV + AE + IETSAK + N+ + F +A L Sbjct: 44 AGQERFRTITQSYYRSANGAILAYDITKRSSFLSVPHWIEDVRKYAGSNIVQLLIGNKSDLSELREVSLAEAQSLAEHYDILCAIETSAKDSSNVEEAFLRVATEL 149
BLAST of DC887399 vs. ExPASy Swiss-Prot
Match: RABG2_DICDI (Ras-related protein RabG2 OS=Dictyostelium discoideum GN=rabG2 PE=3 SV=2) HSP 1 Score: 75.485 bits (184), Expect = 1.557e-13 Identity = 36/107 (33.64%), Postives = 59/107 (55.14%), Query Frame = -1 Query: 182 AGQERYAALAPLYYRGXXXXXXVYDITSPDSFNKAQXWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRLPR 502 AGQER+ + +YRG YD+T ++N + W++E+Q++ + LVGNK DL +++ V EYA+ G+ F+E SA T N+ + F +A + R Sbjct: 63 AGQERFRTITSSFYRGAHGVLVCYDVTDQLTYNNVRLWMQEIQRYAVLGVSRVLVGNKCDLEDRKLVNTSIAREYADSLGIPFMEASAATGVNVEEAFMAMANEIYR 169
BLAST of DC887399 vs. ExPASy Swiss-Prot
Match: RAB43_HUMAN (Ras-related protein Rab-43 OS=Homo sapiens GN=RAB43 PE=1 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 1.557e-13 Identity = 40/106 (37.74%), Postives = 57/106 (53.77%), Query Frame = -1 Query: 188 AGQERYAALAPLYYRGXXXXXXVYDITSPDSFNKAQXWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMF-FIETSAKTADNINQLFEEIAKRL 502 AGQER+ + YYR YDIT SF W+++++K+ +IV L+GNK+DL E REV + AE + IETSAK + N+ + F +A L Sbjct: 75 AGQERFRTITQSYYRSANGAILAYDITKRSSFLSVPHWIEDVRKYAGSNIVQLLIGNKSDLSELREVSLAEAQSLAEHYDILCAIETSAKDSSNVEEAFLRVATEL 180
BLAST of DC887399 vs. ExPASy Swiss-Prot
Match: RB27B_MOUSE (Ras-related protein Rab-27B OS=Mus musculus GN=Rab27b PE=1 SV=3) HSP 1 Score: 75.0998 bits (183), Expect = 2.033e-13 Identity = 44/114 (38.60%), Postives = 67/114 (58.77%), Query Frame = -1 Query: 182 AGQERYAALAPLYYRGXXXXXXVYDITSPDSFNKAQXWVKELQKHG---SPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQ----LFEEIAKRLPR 502 AGQER+ +L ++R ++D+TS SF + W+ +LQ + +PDIV L+GNKADL ++REV + E AEK G+ + ETSA T N+ + L + I KR+ + Sbjct: 76 AGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIV--LIGNKADLPDQREVNERQARELAEKYGIPYFETSAATGQNVEKSVETLLDLIMKRMEK 187
BLAST of DC887399 vs. ExPASy Swiss-Prot
Match: RAB43_RAT (Ras-related protein Rab-43 OS=Rattus norvegicus GN=Rab43 PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 2.033e-13 Identity = 38/106 (35.85%), Postives = 58/106 (54.72%), Query Frame = -1 Query: 188 AGQERYAALAPLYYRGXXXXXXVYDITSPDSFNKAQXWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMF-FIETSAKTADNINQLFEEIAKRL 502 AGQER+ + YYR YDI+ +F W+++++K+ +IV L+GNK+DL + REVP + AE + IETSAK + N+ + F +A L Sbjct: 73 AGQERFRTITQSYYRSANGAILAYDISKRSTFLSVPHWIEDVRKYAGSNIVQLLIGNKSDLADLREVPLAEAQSLAEHYDILCAIETSAKDSSNVEEAFTRVATEL 178
BLAST of DC887399 vs. ExPASy Swiss-Prot
Match: RAB12_RAT (Ras-related protein Rab-12 (Fragment) OS=Rattus norvegicus GN=Rab12 PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 2.033e-13 Identity = 40/111 (36.04%), Postives = 63/111 (56.76%), Query Frame = -1 Query: 185 AGQERYAALAPLYYRGXXXXXXVYDITSPDSFNKAQXWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEK-NGMFFIETSAKTADNINQLF----EEIAKRLP 502 AGQER+ ++ YYR VYDIT ++F+ W+K + K+ S D + L GNK D RE+ Q G ++A++ GM E SAK N++++F ++I K++P Sbjct: 52 AGQERFNSITSAYYRSAKGIILVYDITKKETFDDLPKWMKMIDKYASEDAELLLAGNKLDCETDREISRQQGEKFAQQITGMRLSEPSAKDNFNVDEIFLKLVDDILKKMP 162
BLAST of DC887399 vs. ExPASy Swiss-Prot
Match: RB27B_RAT (Ras-related protein Rab-27B OS=Rattus norvegicus GN=Rab27b PE=2 SV=3) HSP 1 Score: 74.7146 bits (182), Expect = 2.656e-13 Identity = 44/114 (38.60%), Postives = 67/114 (58.77%), Query Frame = -1 Query: 182 AGQERYAALAPLYYRGXXXXXXVYDITSPDSFNKAQXWVKELQKHG---SPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQ----LFEEIAKRLPR 502 AGQER+ +L ++R ++D+TS SF + W+ +LQ + +PDIV L+GNKADL ++REV + E AEK G+ + ETSA T N+ + L + I KR+ + Sbjct: 76 AGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIV--LIGNKADLLDQREVNERQARELAEKYGIPYFETSAATGQNVEKSVETLLDLIMKRMEK 187
BLAST of DC887399 vs. ExPASy Swiss-Prot
Match: RAB43_MOUSE (Ras-related protein Rab-43 OS=Mus musculus GN=Rab43 PE=1 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 2.656e-13 Identity = 38/106 (35.85%), Postives = 58/106 (54.72%), Query Frame = -1 Query: 188 AGQERYAALAPLYYRGXXXXXXVYDITSPDSFNKAQXWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMF-FIETSAKTADNINQLFEEIAKRL 502 AGQER+ + YYR YDI+ +F W+++++K+ +IV L+GNK+DL + REVP + AE + IETSAK + N+ + F +A L Sbjct: 73 AGQERFRTITQSYYRSANGAILAYDISKRSTFLSVPHWIEDVRKYAGSNIVQLLIGNKSDLADFREVPLAEAQSLAEHYDILCAIETSAKDSSNVEEAFTRVATEL 178
BLAST of DC887399 vs. ExPASy Swiss-Prot
Match: RYL2_YARLI (Ras-like GTP-binding protein RYL2 OS=Yarrowia lipolytica GN=RYL2 PE=3 SV=2) HSP 1 Score: 74.3294 bits (181), Expect = 3.468e-13 Identity = 42/112 (37.50%), Postives = 65/112 (58.04%), Query Frame = -1 Query: 188 AGQERYAALAPLYYRGXXXXXXVYDITSPDSFNKAQXWVKELQKHGSPDIVMALVGNKADLHEK----REVPAQDGIEYAE---KNGMFFIETSAKTADNINQLFEEIAKRL 502 AGQER+ ++AP+YYR YD+TS SF+ W+ EL+++ S DI++ +VG K DL + REVP + +EYA ++ E SAK + + ++FE I +L Sbjct: 62 AGQERFRSMAPIYYRSASCGILCYDVTSRASFDAMHLWLLELKQNLSSDIIIHIVGTKVDLVKDEPSLREVPFEQCVEYASEWLQDDSCCHEISAKDDEGVEEVFEVIITKL 173
BLAST of DC887399 vs. ExPASy Swiss-Prot
Match: RB27A_CANFA (Ras-related protein Rab-27A OS=Canis familiaris GN=RAB27A PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 3.468e-13 Identity = 44/114 (38.60%), Postives = 65/114 (57.02%), Query Frame = -1 Query: 182 AGQERYAALAPLYYRGXXXXXXVYDITSPDSFNKAQXWVKELQKHG---SPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQ----LFEEIAKRLPR 502 AGQER+ +L ++R ++D+T+ SF + W+ +LQ H +PDIV L GNK+DL ++R V +D AEK G+ + ETSA NI+Q L + I KR+ R Sbjct: 76 AGQERFRSLTTAFFRDAMGFLLLFDLTNEQSFLNVRNWISQLQMHAYCENPDIV--LCGNKSDLEDQRVVKEEDARGLAEKYGIPYFETSAANGTNISQAIEMLLDLIMKRMER 187 The following BLAST results are available for this feature:
BLAST of DC887399 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 318
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Sequences
The
following sequences are available for this feature:
EST sequence >DC887399 ID=DC887399; Name=DC887399; organism=Citrus sinensis; type=EST; length=502bpback to top |