DC887399
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC887399 vs. ExPASy Swiss-Prot
Match: RAB15_RAT (Ras-related protein Rab-15 OS=Rattus norvegicus GN=Rab15 PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 3.468e-13 Identity = 39/103 (37.86%), Postives = 57/103 (55.34%), Query Frame = -1 Query: 194 AGQERYAALAPLYYRGXXXXXXVYDITSPDSFNKAQXWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAK 502 AGQERY + YYR VYDI+S S+ WV ++ ++ + L+GNKAD +KR+V + G + A++ GM F ETSA T NI + F + + Sbjct: 65 AGQERYQTITKQYYRRAQGIFLVYDISSERSYQHIMKWVSDVDEYAPEGVQKILIGNKADEEQKRQVGREQGQQLAKEYGMDFYETSACTNLNIKESFTRLTE 167
BLAST of DC887399 vs. ExPASy Swiss-Prot
Match: RAB15_MOUSE (Ras-related protein Rab-15 OS=Mus musculus GN=Rab15 PE=1 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 3.468e-13 Identity = 39/103 (37.86%), Postives = 57/103 (55.34%), Query Frame = -1 Query: 194 AGQERYAALAPLYYRGXXXXXXVYDITSPDSFNKAQXWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAK 502 AGQERY + YYR VYDI+S S+ WV ++ ++ + L+GNKAD +KR+V + G + A++ GM F ETSA T NI + F + + Sbjct: 65 AGQERYQTITKQYYRRAQGIFLVYDISSERSYQHIMKWVSDVDEYAPEGVQKILIGNKADEEQKRQVGREQGQQLAKEYGMDFYETSACTNLNIKESFTRLTE 167
BLAST of DC887399 vs. ExPASy Swiss-Prot
Match: RAB15_HUMAN (Ras-related protein Rab-15 OS=Homo sapiens GN=RAB15 PE=1 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 3.468e-13 Identity = 39/103 (37.86%), Postives = 57/103 (55.34%), Query Frame = -1 Query: 194 AGQERYAALAPLYYRGXXXXXXVYDITSPDSFNKAQXWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAK 502 AGQERY + YYR VYDI+S S+ WV ++ ++ + L+GNKAD +KR+V + G + A++ GM F ETSA T NI + F + + Sbjct: 65 AGQERYQTITKQYYRRAQGIFLVYDISSERSYQHIMKWVSDVDEYAPEGVQKILIGNKADEEQKRQVGREQGQQLAKEYGMDFYETSACTNLNIKESFTRLTE 167
BLAST of DC887399 vs. ExPASy Swiss-Prot
Match: RB27B_HUMAN (Ras-related protein Rab-27B OS=Homo sapiens GN=RAB27B PE=1 SV=4) HSP 1 Score: 73.9442 bits (180), Expect = 4.530e-13 Identity = 40/104 (38.46%), Postives = 62/104 (59.62%), Query Frame = -1 Query: 200 AGQERYAALAPLYYRGXXXXXXVYDITSPDSFNKAQXWVKELQKHG---SPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEI 502 AGQER+ +L ++R ++D+TS SF + W+ +LQ + +PDIV L+GNKADL ++REV + E A+K G+ + ETSA T N+ + E + Sbjct: 76 AGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIV--LIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETL 177
BLAST of DC887399 vs. ExPASy Swiss-Prot
Match: RB27A_MOUSE (Ras-related protein Rab-27A OS=Mus musculus GN=Rab27a PE=1 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 4.530e-13 Identity = 43/114 (37.72%), Postives = 65/114 (57.02%), Query Frame = -1 Query: 182 AGQERYAALAPLYYRGXXXXXXVYDITSPDSFNKAQXWVKELQKHG---SPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNIN----QLFEEIAKRLPR 502 AGQER+ +L ++R ++D+T+ SF + W+ +LQ H +PDIV L GNK+DL ++R V ++ E AEK G+ + ETSA NI+ L + I KR+ R Sbjct: 76 AGQERFRSLTTAFFRDAMGFLLLFDLTNEQSFLNVRNWISQLQMHAYCENPDIV--LCGNKSDLEDQRAVKEEEARELAEKYGIPYFETSAANGTNISHAIEMLLDLIMKRMER 187
BLAST of DC887399 vs. ExPASy Swiss-Prot
Match: RAB15_BOVIN (Ras-related protein Rab-15 OS=Bos taurus GN=RAB15 PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 4.530e-13 Identity = 39/103 (37.86%), Postives = 56/103 (54.37%), Query Frame = -1 Query: 194 AGQERYAALAPLYYRGXXXXXXVYDITSPDSFNKAQXWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAK 502 AGQERY + YYR VYDI+S S+ WV ++ ++ + L+GNKAD +KR+V + G + A + GM F ETSA T NI + F + + Sbjct: 65 AGQERYQTITKQYYRRAQGIFLVYDISSERSYQHIMKWVSDVDEYAPEGVQKILIGNKADEEQKRQVGREQGQQLAREYGMDFYETSACTNLNIKESFTRLTE 167
BLAST of DC887399 vs. ExPASy Swiss-Prot
Match: YPTV3_VOLCA (GTP-binding protein yptV3 OS=Volvox carteri GN=YPTV3 PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 5.916e-13 Identity = 37/107 (34.58%), Postives = 63/107 (58.88%), Query Frame = -1 Query: 188 AGQERYAALAPLYYRGXXXXXXVYDITSPDSFNKAQX-WVKELQKHGSPD-IVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRL 502 AGQER+ L YYRG VYD+T D+F + W++E + + + + +V NK DL +R+V +++G ++A ++G F+ETSA+ + Q FEE+ ++ Sbjct: 66 AGQERFRTLTSSYYRGAQGIIFVYDVTRRDTFESLEANWMREFDIYSTVESAIKMVVANKVDLSAQRQVSSEEGHDFARRHGCLFVETSARANLAVGQAFEELLLKI 172
BLAST of DC887399 vs. ExPASy Swiss-Prot
Match: RB39B_MOUSE (Ras-related protein Rab-39B OS=Mus musculus GN=Rab39b PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 5.916e-13 Identity = 38/104 (36.54%), Postives = 59/104 (56.73%), Query Frame = -1 Query: 194 AGQERYAALAPLYYRGXXXXXXVYDITSPDSFNKAQXWVKELQKHGSP-DIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAK 502 AGQER+ ++ YYR ++DIT+ SF W++E + H P IV LVG+K DL +R+V + + A GM +IETSA+ A N+ + F ++ + Sbjct: 66 AGQERFRSITRAYYRNSVGGLLLFDITNRRSFQNVHEWLEETKVHVQPYQIVFVLVGHKCDLDTQRQVTRHEAEKLAAAYGMKYIETSARDAINVEKAFTDLTR 169
BLAST of DC887399 vs. ExPASy Swiss-Prot
Match: RB39B_HUMAN (Ras-related protein Rab-39B OS=Homo sapiens GN=RAB39B PE=1 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 5.916e-13 Identity = 38/104 (36.54%), Postives = 59/104 (56.73%), Query Frame = -1 Query: 194 AGQERYAALAPLYYRGXXXXXXVYDITSPDSFNKAQXWVKELQKHGSP-DIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAK 502 AGQER+ ++ YYR ++DIT+ SF W++E + H P IV LVG+K DL +R+V + + A GM +IETSA+ A N+ + F ++ + Sbjct: 66 AGQERFRSITRAYYRNSVGGLLLFDITNRRSFQNVHEWLEETKVHVQPYQIVFVLVGHKCDLDTQRQVTRHEAEKLAAAYGMKYIETSARDAINVEKAFTDLTR 169
BLAST of DC887399 vs. ExPASy Swiss-Prot
Match: RB39B_BOVIN (Ras-related protein Rab-39B OS=Bos taurus GN=RAB39B PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 5.916e-13 Identity = 38/104 (36.54%), Postives = 59/104 (56.73%), Query Frame = -1 Query: 194 AGQERYAALAPLYYRGXXXXXXVYDITSPDSFNKAQXWVKELQKHGSP-DIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAK 502 AGQER+ ++ YYR ++DIT+ SF W++E + H P IV LVG+K DL +R+V + + A GM +IETSA+ A N+ + F ++ + Sbjct: 66 AGQERFRSITRAYYRNSVGGLLLFDITNRRSFQNVHEWLEETKVHVQPYQIVFVLVGHKCDLDTQRQVTRHEAEKLAAAYGMKYIETSARDAINVEKAFTDLTR 169 The following BLAST results are available for this feature:
BLAST of DC887399 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 318
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Sequences
The
following sequences are available for this feature:
EST sequence >DC887399 ID=DC887399; Name=DC887399; organism=Citrus sinensis; type=EST; length=502bpback to top |