DC887399
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC887399 vs. ExPASy Swiss-Prot
Match: RAB4A_ECHMU (Probable Ras-related protein Rab-4A OS=Echinococcus multilocularis PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 5.916e-13 Identity = 40/106 (37.74%), Postives = 61/106 (57.55%), Query Frame = -1 Query: 188 AGQERYAALAPLYYRGXXXXXXVYDITSPDSFNKAQXWVKELQKHGSPDIVMALVGNKADLHE-KREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRL 502 AGQER+ ++A YY VYDIT+ SF + W+ + + +P +V+ LVGNK DL + +V + +A++NG+ FIETSA T +NI+ F + L Sbjct: 66 AGQERFRSMARSYYHDAVGTLLVYDITNRTSFGAVEQWLGDARHLATPGVVVILVGNKKDLRDTDGQVTHWEANTFAQENGLQFIETSALTGENIDDAFTSCVRVL 171
BLAST of DC887399 vs. ExPASy Swiss-Prot
Match: RAB35_RAT (Ras-related protein Rab-35 OS=Rattus norvegicus GN=Rab35 PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.009e-12 Identity = 39/107 (36.45%), Postives = 61/107 (57.01%), Query Frame = -1 Query: 182 AGQERYAALAPLYYRGXXXXXXVYDITSPDSFNKAQXWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRLPR 502 AGQER+ + YYRG VYD+TS +SF + W+ E+ ++ D+ LVGNK D E++ V +D ++A + G+ ETSAK N+ ++F I + + R Sbjct: 65 AGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQN-CDDVCRILVGNKNDDPERKVVETEDAYKFAGQMGIQLFETSAKENVNVEEMFNCITELVLR 170
BLAST of DC887399 vs. ExPASy Swiss-Prot
Match: RAB35_MOUSE (Ras-related protein Rab-35 OS=Mus musculus GN=Rab35 PE=1 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.009e-12 Identity = 39/107 (36.45%), Postives = 61/107 (57.01%), Query Frame = -1 Query: 182 AGQERYAALAPLYYRGXXXXXXVYDITSPDSFNKAQXWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRLPR 502 AGQER+ + YYRG VYD+TS +SF + W+ E+ ++ D+ LVGNK D E++ V +D ++A + G+ ETSAK N+ ++F I + + R Sbjct: 65 AGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQN-CDDVCRILVGNKNDDPERKVVETEDAYKFAGQMGIQLFETSAKENVNVEEMFNCITELVLR 170
BLAST of DC887399 vs. ExPASy Swiss-Prot
Match: RAB35_HUMAN (Ras-related protein Rab-35 OS=Homo sapiens GN=RAB35 PE=1 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.009e-12 Identity = 39/107 (36.45%), Postives = 61/107 (57.01%), Query Frame = -1 Query: 182 AGQERYAALAPLYYRGXXXXXXVYDITSPDSFNKAQXWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRLPR 502 AGQER+ + YYRG VYD+TS +SF + W+ E+ ++ D+ LVGNK D E++ V +D ++A + G+ ETSAK N+ ++F I + + R Sbjct: 65 AGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQN-CDDVCRILVGNKNDDPERKVVETEDAYKFAGQMGIQLFETSAKENVNVEEMFNCITELVLR 170
BLAST of DC887399 vs. ExPASy Swiss-Prot
Match: RB39A_MOUSE (Ras-related protein Rab-39A OS=Mus musculus GN=Rab39 PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.721e-12 Identity = 39/99 (39.39%), Postives = 57/99 (57.58%), Query Frame = -1 Query: 209 AGQERYAALAPLYYRGXXXXXXVYDITSPDSFNKAQXWVKELQKHGSP-DIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLF 502 AGQER+ ++ YYR V+DIT+ SF + W++E + H P IV LVG+K DL +R+V ++ + GM +IETSAK A N+ + F Sbjct: 70 AGQERFRSITRSYYRNSVGGFLVFDITNRRSFEHVKDWLEEAKMHVQPFQIVFLLVGHKCDLASQRQVSREEAERLSTDCGMKYIETSAKDATNVEESF 168
BLAST of DC887399 vs. ExPASy Swiss-Prot
Match: RB27B_BOVIN (Ras-related protein Rab-27B OS=Bos taurus GN=RAB27B PE=2 SV=3) HSP 1 Score: 71.633 bits (174), Expect = 2.248e-12 Identity = 39/104 (37.50%), Postives = 61/104 (58.65%), Query Frame = -1 Query: 200 AGQERYAALAPLYYRGXXXXXXVYDITSPDSFNKAQXWVKELQKHG---SPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEI 502 AGQER+ +L ++R ++D+TS SF + W+ +LQ + +PDIV L+GNKADL ++REV + + AEK + + ETSA T N+ + E + Sbjct: 76 AGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIV--LIGNKADLPDQREVNERQARDLAEKYSIPYFETSAATGQNVEKAVETL 177
BLAST of DC887399 vs. ExPASy Swiss-Prot
Match: RAB24_MOUSE (Ras-related protein Rab-24 OS=Mus musculus GN=Rab24 PE=1 SV=2) HSP 1 Score: 71.633 bits (174), Expect = 2.248e-12 Identity = 40/107 (37.38%), Postives = 61/107 (57.01%), Query Frame = -1 Query: 194 AGQERYAALAPLYYRGXXXXXXVYDITSPDSFNKAQXWVKELQKHGSPDIVMALVGNKADLHE----KREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAK 502 AG ERY A++ +YYRG YD+T SF +A+ WVKEL+ + L G K+DL E +R V D +YA+ ETS+KT ++++LF+++A+ Sbjct: 65 AGSERYEAMSRIYYRGAKAAIVCYDLTDSSSFERAKFWVKELRSL-EEGCQIYLCGTKSDLLEEDRRRRRVDFHDVQDYADNIKAQLFETSSKTGQSVDELFQKVAE 170
BLAST of DC887399 vs. ExPASy Swiss-Prot
Match: RAB24_HUMAN (Ras-related protein Rab-24 OS=Homo sapiens GN=RAB24 PE=1 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 2.248e-12 Identity = 40/107 (37.38%), Postives = 61/107 (57.01%), Query Frame = -1 Query: 194 AGQERYAALAPLYYRGXXXXXXVYDITSPDSFNKAQXWVKELQKHGSPDIVMALVGNKADLHE----KREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAK 502 AG ERY A++ +YYRG YD+T SF +A+ WVKEL+ + L G K+DL E +R V D +YA+ ETS+KT ++++LF+++A+ Sbjct: 65 AGSERYEAMSRIYYRGAKAAIVCYDLTDSSSFERAKFWVKELRSL-EEGCQIYLCGTKSDLLEEDRRRRRVDFHDVQDYADNIKAQLFETSSKTGQSVDELFQKVAE 170
BLAST of DC887399 vs. ExPASy Swiss-Prot
Match: CPAS2_DICDI (Circularly permutated Ras protein 2 OS=Dictyostelium discoideum GN=cpras2 PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 2.248e-12 Identity = 40/105 (38.10%), Postives = 57/105 (54.29%), Query Frame = -1 Query: 194 AGQERYAALAPLYYRGXXXXXXVYDITSPDSFNKAQXWVKELQKHGSPD--IVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAK 502 AGQE Y+A+ YYR Y I S SF Q + +L + D + ++G KADL ++R+V +DG+ YA G FIETSAKT N++ F ++K Sbjct: 2855 AGQEEYSAMRDQYYRHGDAFILAYSINSRSSFQNLQSYYNQLCRIKDCDSYACVIVIGTKADLEDQRQVSKEDGLLYARSLGAAFIETSAKTGFNVHTAFAIVSK 2959
BLAST of DC887399 vs. ExPASy Swiss-Prot
Match: RB33A_MOUSE (Ras-related protein Rab-33A OS=Mus musculus GN=Rab33a PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 3.835e-12 Identity = 41/110 (37.27%), Postives = 61/110 (55.45%), Query Frame = -1 Query: 188 AGQERYA-ALAPLYYRGXXXXXXVYDITSPDSFNKAQXWVKELQKHGSPDIV-MALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSA---KTADNINQLFEEIAKRL 502 AGQER+ ++ YYR VYD+T SF + W++E H P +V LVGNK DL E+ +VP+ +++A+ + M ETSA K + N+ +F +A RL Sbjct: 93 AGQERFRKSMVEHYYRNVHAVVFVYDVTKMTSFTNLKMWIQECNGHAVPPLVPKVLVGNKCDLREQIQVPSNLALKFADAHNMLLFETSAKDPKESQNVESIFMCLACRL 202 The following BLAST results are available for this feature:
BLAST of DC887399 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 318
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DC887399 ID=DC887399; Name=DC887399; organism=Citrus sinensis; type=EST; length=502bpback to top |