DC887399
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC887399 vs. ExPASy Swiss-Prot
Match: RB11A_LOTJA (Ras-related protein Rab11A OS=Lotus japonicus GN=RAB11A PE=2 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 7.709e-21 Identity = 47/101 (46.53%), Postives = 64/101 (63.37%), Query Frame = -1 Query: 200 AGQERYAALAPLYYRGXXXXXXVYDITSPDSFNKAQXWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEI 502 AGQERY A+ YYRG VYDIT +F+ W++EL+ H +IV+ L+GNK DL +R+VP +D E+AEK G+FF+ETSA A N+ F + Sbjct: 74 AGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRNHADKNIVIILIGNKCDLVNQRDVPTEDAKEFAEKEGLFFLETSALEATNVESAFTTV 174
BLAST of DC887399 vs. ExPASy Swiss-Prot
Match: RB11D_LOTJA (Ras-related protein Rab11D OS=Lotus japonicus GN=RAB11D PE=2 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 1.315e-20 Identity = 47/107 (43.93%), Postives = 66/107 (61.68%), Query Frame = -1 Query: 182 AGQERYAALAPLYYRGXXXXXXVYDITSPDSFNKAQXWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRLPR 502 AGQERY A+ YYRG VYD+T +F A W+KEL+ H P+IV+ L+GNK+DL VP +DG +AE+ ++F+ETSA A N+ F E+ ++ R Sbjct: 70 AGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNIVVMLIGNKSDLRHLVAVPTEDGKSFAERESLYFMETSALEATNVENAFTEVLTQIYR 176
BLAST of DC887399 vs. ExPASy Swiss-Prot
Match: RAA2A_ARATH (Ras-related protein RABA2a OS=Arabidopsis thaliana GN=RABA2A PE=2 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 1.315e-20 Identity = 49/107 (45.79%), Postives = 63/107 (58.88%), Query Frame = -1 Query: 182 AGQERYAALAPLYYRGXXXXXXVYDITSPDSFNKAQXWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRLPR 502 AGQERY A+ YYRG VYD+T P +F W+KEL+ H +IV+ L+GNK DL R V +D YAEK G+ FIETSA A N+ + F+ I + R Sbjct: 69 AGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEALNVEKAFQTILSEVYR 175
BLAST of DC887399 vs. ExPASy Swiss-Prot
Match: RB11D_TOBAC (Ras-related protein Rab11D OS=Nicotiana tabacum GN=RAB11D PE=2 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 2.243e-20 Identity = 46/98 (46.94%), Postives = 63/98 (64.29%), Query Frame = -1 Query: 209 AGQERYAALAPLYYRGXXXXXXVYDITSPDSFNKAQXWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLF 502 AGQERY A+ YYRG VYDIT +F+ W++EL+ H +IV+ L+GNK DL ++R VP +D E+A+K G+FF+ETSA A N+ F Sbjct: 72 AGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRAHADRNIVIMLIGNKTDLEDQRAVPTEDAKEFAQKEGLFFLETSAMEATNLEDAF 169
BLAST of DC887399 vs. ExPASy Swiss-Prot
Match: RAB21_GEOCY (Ras-related protein Rab-21 OS=Geodia cydonium GN=RAB21 PE=2 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 2.243e-20 Identity = 49/105 (46.67%), Postives = 67/105 (63.81%), Query Frame = -1 Query: 188 AGQERYAALAPLYYRGXXXXXXVYDITSPDSFNKAQXWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRL 502 AGQERY AL P+YYR VYDIT DSF+KA+ W+KEL++ + + +VGNK DL +R V +D +EYAE G TSAK + + +LF ++AKR+ Sbjct: 73 AGQERYHALGPIYYRDSQGAIIVYDITDEDSFHKARNWIKELKRMLGDKVTLCIVGNKIDLDRQRTVSEKDALEYAESVGAKHYYTSAKQSKGVAELFLDLAKRI 177
BLAST of DC887399 vs. ExPASy Swiss-Prot
Match: RAA1B_ARATH (Ras-related protein RABA1b OS=Arabidopsis thaliana GN=RABA1B PE=2 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 2.243e-20 Identity = 48/107 (44.86%), Postives = 64/107 (59.81%), Query Frame = -1 Query: 182 AGQERYAALAPLYYRGXXXXXXVYDITSPDSFNKAQXWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRLPR 502 AGQERY A+ YYRG VYD+T +F W+KEL+ H P+IV+ LVGNK+DL VP +DG YAE+ + F+ETSA A N+ F E+ ++ R Sbjct: 70 AGQERYRAITSAYYRGAVGALLVYDVTRRATFENVDRWLKELKNHTDPNIVVMLVGNKSDLRHLLAVPTEDGKSYAEQESLCFMETSALEATNVEDAFAEVLTQIYR 176
BLAST of DC887399 vs. ExPASy Swiss-Prot
Match: RAB2B_DICDI (Ras-related protein Rab-2B OS=Dictyostelium discoideum GN=rab2B PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 2.929e-20 Identity = 46/105 (43.81%), Postives = 66/105 (62.86%), Query Frame = -1 Query: 188 AGQERYAALAPLYYRGXXXXXXVYDITSPDSFNKAQXWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRL 502 AGQE++ ++ YYRG VYDIT DSF W+ + +K S D+ L+GNKADL R+V + E+AEKNG+ F ETSAKTA N+++ FE+ +++ Sbjct: 81 AGQEKFRSITRAYYRGAVCAMIVYDITRRDSFESLNSWLTDCRKFSSCDVTTVLIGNKADLEANRQVSTSEAKEFAEKNGLMFFETSAKTALNVDEAFEKSTEQI 185
BLAST of DC887399 vs. ExPASy Swiss-Prot
Match: RB11E_LOTJA (Ras-related protein Rab11E OS=Lotus japonicus GN=RAB11E PE=2 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 4.997e-20 Identity = 47/107 (43.93%), Postives = 65/107 (60.75%), Query Frame = -1 Query: 182 AGQERYAALAPLYYRGXXXXXXVYDITSPDSFNKAQXWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRLPR 502 AGQERY A+ YYRG VYD+T +F A W+KEL+ H P+IV+ L+GNK+DL V +DG +AEK ++F+ETSA A N+ F E+ ++ R Sbjct: 70 AGQERYRAITSAYYRGAVGALLVYDVTRSTTFETAGRWLKELRDHTDPNIVVMLIGNKSDLRHLVTVSTEDGKAFAEKESLYFMETSALEATNVENAFSEVLTQIYR 176
BLAST of DC887399 vs. ExPASy Swiss-Prot
Match: RAB2A_RAT (Ras-related protein Rab-2A OS=Rattus norvegicus GN=Rab2a PE=2 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 1.454e-19 Identity = 43/105 (40.95%), Postives = 69/105 (65.71%), Query Frame = -1 Query: 188 AGQERYAALAPLYYRGXXXXXXVYDITSPDSFNKAQXWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRL 502 AGQE + ++ YYRG VYDIT D+FN W+++ ++H + ++V+ L+GNK+DL +REV ++G +A ++G+ F+ETSAKTA N+ + F AK + Sbjct: 63 AGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEI 167
BLAST of DC887399 vs. ExPASy Swiss-Prot
Match: RAB2A_RABIT (Ras-related protein Rab-2A OS=Oryctolagus cuniculus GN=RAB2A PE=2 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 1.454e-19 Identity = 43/105 (40.95%), Postives = 69/105 (65.71%), Query Frame = -1 Query: 188 AGQERYAALAPLYYRGXXXXXXVYDITSPDSFNKAQXWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRL 502 AGQE + ++ YYRG VYDIT D+FN W+++ ++H + ++V+ L+GNK+DL +REV ++G +A ++G+ F+ETSAKTA N+ + F AK + Sbjct: 63 AGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEI 167 The following BLAST results are available for this feature:
BLAST of DC887399 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 318
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Sequences
The
following sequences are available for this feature:
EST sequence >DC887399 ID=DC887399; Name=DC887399; organism=Citrus sinensis; type=EST; length=502bpback to top |